Package evaluation of Pingouin on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-14T18:44:26.246 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 10.66s ################################################################################ # Installation # Installing Pingouin... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [61ac1d4c] + Pingouin v0.2.3 Updating `~/.julia/environments/v1.12/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 ⌅ [336ed68f] + CSV v0.8.5 [d360d2e6] + ChainRulesCore v1.25.2 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.4.4 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 ⌅ [09f84164] + HypothesisTests v0.10.13 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 ⌅ [69de0a69] + Parsers v1.1.2 [61ac1d4c] + Pingouin v0.2.3 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 ⌅ [79098fc4] + Rmath v0.7.1 [f2b01f46] + Roots v2.2.8 [91c51154] + SentinelArrays v1.4.8 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.1 ⌅ [276daf66] + SpecialFunctions v1.8.8 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [4c63d2b9] + StatsFuns v0.9.18 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] + Rmath_jll v0.4.3+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.0s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 162.02s ################################################################################ # Testing # Testing Pingouin Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_Tuqykn/Project.toml` ⌃ [a93c6f00] ↑ DataFrames v0.21.8 ⇒ v1.4.4 [61ac1d4c] + Pingouin v0.2.3 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_Tuqykn/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [66dad0bd] + AliasTables v1.1.3 ⌅ [336ed68f] + CSV v0.8.5 [324d7699] - CategoricalArrays v0.8.3 [d360d2e6] + ChainRulesCore v1.25.2 [861a8166] + Combinatorics v1.0.3 [38540f10] + CommonSolve v0.2.4 [34da2185] ↑ Compat v3.20.0 ⇒ v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] ↑ DataAPI v1.3.0 ⇒ v1.16.0 ⌃ [a93c6f00] ↑ DataFrames v0.21.8 ⇒ v1.4.4 [864edb3b] ↑ DataStructures v0.18.7 ⇒ v0.18.22 [8bb1440f] - DelimitedFiles [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [1a297f60] + FillArrays v1.13.0 [34004b35] + HypergeometricFunctions v0.3.28 ⌅ [09f84164] + HypothesisTests v0.10.13 [3587e190] + InverseFunctions v0.1.17 [41ab1584] ↑ InvertedIndices v1.0.0 ⇒ v1.3.1 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] - JSON v0.21.1 [b964fa9f] + LaTeXStrings v1.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] ↑ Missings v0.4.4 ⇒ v1.2.0 [bac558e1] ↑ OrderedCollections v1.3.1 ⇒ v1.8.1 [90014a1f] + PDMats v0.11.35 ⌅ [69de0a69] ↑ Parsers v1.0.11 ⇒ v1.1.2 [61ac1d4c] + Pingouin v0.2.3 [2dfb63ee] ↑ PooledArrays v0.5.3 ⇒ v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] ↑ Reexport v0.2.0 ⇒ v1.2.2 ⌅ [79098fc4] + Rmath v0.7.1 [f2b01f46] + Roots v2.2.8 [91c51154] + SentinelArrays v1.4.8 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] ↑ SortingAlgorithms v0.3.1 ⇒ v1.2.1 ⌅ [276daf66] + SpecialFunctions v1.8.8 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 ⌅ [2913bbd2] + StatsBase v0.33.21 ⌅ [4c63d2b9] + StatsFuns v0.9.18 [892a3eda] + StringManipulation v0.4.1 [856f2bd8] - StructTypes v1.1.0 [3783bdb8] ↑ TableTraits v1.0.0 ⇒ v1.0.1 [bd369af6] ↑ Tables v1.1.0 ⇒ v1.12.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] + Rmath_jll v0.4.3+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] - Distributed [9fa8497b] ~ Future ⇒ v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [76f85450] - LibGit2 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.12.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [44cfe95a] - Pkg [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [ea8e919c] ~ SHA ⇒ v0.7.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [1a1011a3] - SharedArrays [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ~ SparseArrays ⇒ v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_Tuqykn/Project.toml` ⌃ [a93c6f00] DataFrames v1.4.4 [61ac1d4c] Pingouin v0.2.3 [8dfed614] Test v1.11.0 Status `/tmp/jl_Tuqykn/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [66dad0bd] AliasTables v1.1.3 ⌅ [336ed68f] CSV v0.8.5 [d360d2e6] ChainRulesCore v1.25.2 [861a8166] Combinatorics v1.0.3 [38540f10] CommonSolve v0.2.4 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.6.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [a93c6f00] DataFrames v1.4.4 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [1a297f60] FillArrays v1.13.0 [34004b35] HypergeometricFunctions v0.3.28 ⌅ [09f84164] HypothesisTests v0.10.13 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 ⌅ [92d709cd] IrrationalConstants v0.1.1 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 ⌅ [69de0a69] Parsers v1.1.2 [61ac1d4c] Pingouin v0.2.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 ⌅ [79098fc4] Rmath v0.7.1 [f2b01f46] Roots v2.2.8 [91c51154] SentinelArrays v1.4.8 [66db9d55] SnoopPrecompile v1.0.3 [a2af1166] SortingAlgorithms v1.2.1 ⌅ [276daf66] SpecialFunctions v1.8.8 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 ⌅ [2913bbd2] StatsBase v0.33.21 ⌅ [4c63d2b9] StatsFuns v0.9.18 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] Rmath_jll v0.4.3+0 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [8e850b90] libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... Info Given Pingouin was explicitly requested, output will be shown live  WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 17471.9 ms ? Pingouin WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition anderson(Array{var"#s34", N} where N where var"#s34"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:131 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:140. WARNING: Method definition anderson(Array{Array{T, 1}, 1} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:147 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/distributions.jl:157. WARNING: Method definition _check_eftype(String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:7 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition compute_effsize(Array{var"#s243", N} where N where var"#s243"<:Number, Array{var"#s242", N} where N where var"#s242"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:148 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_effsize), Array{var"#s241", N} where N where var"#s241"<:Number, Array{var"#s240", N} where N where var"#s240"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:148 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition convert_effsize(Float64, String, String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:308 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.convert_effsize), Float64, String, String) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:308 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.convert_effsize :: Tuple{Float64, String, String}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:249 WARNING: Method definition compute_effsize_from_t(Float64) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:412 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_effsize_from_t), Float64) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:412 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.compute_effsize_from_t :: Tuple{Float64}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:249 WARNING: Method definition compute_esci() in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:537 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_esci)) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:537 overwritten on the same line (check for duplicate calls to `include`). ┌ Warning: Replacing docs for `Pingouin.compute_esci :: Tuple{}` in module `Pingouin` └ @ Base.Docs docs/Docs.jl:249 WARNING: Method definition compute_bootci(Array{var"#s197", N} where N where var"#s197"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:683 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Pingouin.compute_bootci), Array{var"#s196", N} where N where var"#s196"<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/effsize.jl:683 overwritten on the same line (check for duplicate calls to `include`). WARNING: Method definition harrelldavis(Array{T, 1} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:580 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:594. WARNING: Method definition harrelldavis(Array{T, 2} where T<:Number) in module Pingouin at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:602 overwritten at /home/pkgeval/.julia/packages/Pingouin/L0EE5/src/nonparametric.jl:624. Test Summary: | Pass Total Time Normality | 4 4 1m06.1s Test Summary: | Pass Total Time Homoscedasticity | 3 3 6.9s Test Summary: | Pass Total Time Sphericity | 2 2 12.6s Test Summary: | Pass Total Time Effsize | 2 2 4.5s Test Summary: | Pass Total Time Harrell-Davis | 6 6 28.1s Test Summary: | Pass Total Time Bayes_Factor_Binomial_Test | 1 1 5.3s Test Summary: | Pass Total Time Bayes_Factor_Pearson_Correlation | 2 2 5.1s Testing Pingouin tests passed Testing completed after 208.49s PkgEval succeeded after 406.62s