Package evaluation of OnlinePCA on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-15T00:07:55.918 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.8s ################################################################################ # Installation # Installing OnlinePCA... Resolving package versions... Installed libaec_jll ────────────────── v1.1.3+0 Installed IrrationalConstants ───────── v0.2.4 Installed MPICH_jll ─────────────────── v4.3.1+0 Installed MatrixMarket ──────────────── v0.5.2 Installed Rmath ─────────────────────── v0.8.0 Installed Kaleido_jll ───────────────── v0.2.1+0 Installed Crayons ───────────────────── v4.1.1 Installed ColorTypes ────────────────── v0.12.1 Installed HypergeometricFunctions ───── v0.3.28 Installed WebSockets ────────────────── v1.6.0 Installed PrettyTables ──────────────── v2.4.0 Installed JSON ──────────────────────── v0.21.4 Installed StatsFuns ─────────────────── v1.5.0 Installed TensorCore ────────────────── v0.1.1 Installed PlotlyKaleido ─────────────── v2.3.0 Installed Preferences ───────────────── v1.4.3 Installed JSExpr ────────────────────── v0.5.4 Installed PlotlyJS ──────────────────── v0.18.16 Installed Zstd_jll ──────────────────── v1.5.7+1 Installed PtrArrays ─────────────────── v1.3.0 Installed TableTraits ───────────────── v1.0.1 Installed LoggingExtras ─────────────── v1.1.0 Installed BitFlags ──────────────────── v0.1.9 Installed SpecialFunctions ──────────── v2.5.1 Installed Mustache ──────────────────── v1.0.21 Installed Blink ─────────────────────── v0.12.9 Installed Hwloc_jll ─────────────────── v2.12.1+0 Installed Parsers ───────────────────── v2.8.3 Installed PlotlyBase ────────────────── v0.8.21 Installed FunctionalCollections ─────── v0.5.0 Installed SimpleBufferStream ────────── v1.2.0 Installed Tables ────────────────────── v1.12.1 Installed SentinelArrays ────────────── v1.4.8 Installed PDMats ────────────────────── v0.11.35 Installed DataAPI ───────────────────── v1.16.0 Installed FixedPointNumbers ─────────── v0.8.5 Installed PooledArrays ──────────────── v1.4.3 Installed MicrosoftMPI_jll ──────────── v10.1.4+3 Installed InlineStrings ─────────────── v1.4.4 Installed ConcurrentUtilities ───────── v2.5.0 Installed JLLWrappers ───────────────── v1.7.0 Installed ProgressMeter ─────────────── v1.10.4 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ColorVectorSpace ──────────── v0.11.0 Installed Mux ───────────────────────── v1.0.2 Installed PrecompileTools ───────────── v1.3.2 Installed URIs ──────────────────────── v1.6.1 Installed OpenMPI_jll ───────────────── v5.0.8+0 Installed DataValueInterfaces ───────── v1.0.0 Installed Pidfile ───────────────────── v1.3.0 Installed OrderedCollections ────────── v1.8.1 Installed WorkerUtilities ───────────── v1.6.1 Installed LaTeXStrings ──────────────── v1.4.0 Installed TranscodingStreams ────────── v0.11.3 Installed ColorSchemes ──────────────── v3.30.0 Installed OpenSSL ───────────────────── v1.5.0 Installed AssetRegistry ─────────────── v0.1.0 Installed DelimitedFiles ────────────── v1.9.1 Installed InvertedIndices ───────────── v1.3.1 Installed HTTP ──────────────────────── v1.10.17 Installed FilePathsBase ─────────────── v0.9.24 Installed HDF5 ──────────────────────── v0.17.2 Installed FillArrays ────────────────── v1.13.0 Installed QuadGK ────────────────────── v2.11.2 Installed MPIPreferences ────────────── v0.1.11 Installed Reexport ──────────────────── v1.2.2 Installed DataFrames ────────────────── v1.7.0 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Statistics ────────────────── v1.11.1 Installed MbedTLS ───────────────────── v1.1.9 Installed WeakRefStrings ────────────── v1.4.2 Installed StatsModels ───────────────── v0.7.4 Installed CSV ───────────────────────── v0.10.15 Installed Hiccup ────────────────────── v0.2.2 Installed MPItrampoline_jll ─────────── v5.5.4+0 Installed GLM ───────────────────────── v1.9.0 Installed CodecZstd ─────────────────── v0.8.6 Installed WebIO ─────────────────────── v0.8.21 Installed ShiftedArrays ─────────────── v2.0.0 Installed Requires ──────────────────── v1.3.1 Installed LogExpFunctions ───────────── v0.3.29 Installed Colors ────────────────────── v0.13.1 Installed Observables ───────────────── v0.5.5 Installed AliasTables ───────────────── v1.1.3 Installed DataStructures ────────────── v0.18.22 Installed MbedTLS_jll ───────────────── v2.28.6+2 Installed StatsAPI ──────────────────── v1.7.1 Installed UnPack ────────────────────── v1.0.2 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed MacroTools ────────────────── v0.5.16 Installed Compat ────────────────────── v4.17.0 Installed Parameters ────────────────── v0.12.3 Installed Distributions ─────────────── v0.25.120 Installed Lazy ──────────────────────── v0.15.1 Installed CodecZlib ─────────────────── v0.7.8 Installed ArgParse ──────────────────── v1.2.0 Installed StringManipulation ────────── v0.4.1 Installed Missings ──────────────────── v1.2.0 Installed StatsBase ─────────────────── v0.34.5 Installed SortingAlgorithms ─────────── v1.2.1 Installed TextWrap ──────────────────── v1.0.2 Installed ExceptionUnwrapping ───────── v0.1.11 Installed HDF5_jll ──────────────────── v1.14.6+0 Installed DocStringExtensions ───────── v0.9.5 Installed Widgets ───────────────────── v0.6.7 Installed OnlinePCA ─────────────────── v0.3.10 Installing 15 artifacts Installed artifact libaec 96.2 KiB Installed artifact mathjax 18.7 KiB Installed artifact Zstd 646.0 KiB Installed artifact Rmath 121.9 KiB Installed artifact plotly-base-artifacts 430.0 KiB Installed artifact web 215.6 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Hwloc 3.5 MiB Installed artifact plotly-artifacts 1.4 MiB Installed artifact plotly 2.3 MiB Installed artifact MPICH 3.3 MiB Installed artifact HDF5 5.7 MiB Installed artifact electronjs_app 79.1 MiB Installed artifact Kaleido 75.3 MiB Updating `~/.julia/environments/v1.12/Project.toml` [975b03d1] + OnlinePCA v0.3.10 Updating `~/.julia/environments/v1.12/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [c7e460c6] + ArgParse v1.2.0 [bf4720bc] + AssetRegistry v0.1.0 [d1d4a3ce] + BitFlags v0.1.9 [ad839575] + Blink v0.12.9 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.6 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.17.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.0 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [9fb69e20] + Hiccup v0.2.2 [34004b35] + HypergeometricFunctions v0.3.28 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [4d4711f2] + MatrixMarket v0.5.2 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.21 [f0f68f2c] + PlotlyJS v0.18.16 [f2990250] + PlotlyKaleido v2.3.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [3eaba693] + StatsModels v0.7.4 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [b718987f] + TextWrap v1.0.2 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] + MbedTLS_jll v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Building WebIO ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0eef0765186f7452e52236fa42ca8c9b3c11c6e3/build.log` Building PlotlyJS → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b816b0f301b074e002476159a9ada5691eebaf61/build.log` Installation completed after 81.53s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 4453.1 ms ✓ TestEnv 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 601.03s ################################################################################ # Testing # Testing OnlinePCA Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Updating `/tmp/jl_oogiUp/Project.toml` [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.120 [1a297f60] ↑ FillArrays v1.12.0 ⇒ v1.13.0 [975b03d1] + OnlinePCA v0.3.10 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [37e2e46d] ~ LinearAlgebra ⇒ v1.12.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.12.0 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_oogiUp/Manifest.toml` [bf4720bc] + AssetRegistry v0.1.0 [d1d4a3ce] + BitFlags v0.1.9 [ad839575] + Blink v0.12.9 [336ed68f] + CSV v0.10.15 [944b1d66] ↑ CodecZlib v0.7.6 ⇒ v0.7.8 [6b39b394] + CodecZstd v0.8.6 [35d6a980] + ColorSchemes v3.30.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] ↑ Compat v4.16.0 ⇒ v4.17.0 [f0e56b4a] + ConcurrentUtilities v2.5.0 [a8cc5b0e] + Crayons v4.1.1 [a93c6f00] + DataFrames v1.7.0 [864edb3b] ↑ DataStructures v0.18.20 ⇒ v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] ↑ Distributions v0.25.111 ⇒ v0.25.120 [ffbed154] ↑ DocStringExtensions v0.9.3 ⇒ v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [48062228] + FilePathsBase v0.9.24 [1a297f60] ↑ FillArrays v1.12.0 ⇒ v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [de31a74c] + FunctionalCollections v0.5.0 [38e38edf] + GLM v1.9.0 [f67ccb44] + HDF5 v0.17.2 [cd3eb016] + HTTP v1.10.17 [9fb69e20] + Hiccup v0.2.2 [34004b35] ↑ HypergeometricFunctions v0.3.24 ⇒ v0.3.28 [842dd82b] + InlineStrings v1.4.4 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] ↑ IrrationalConstants v0.2.2 ⇒ v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] ↑ JLLWrappers v1.5.0 ⇒ v1.7.0 [97c1335a] + JSExpr v0.5.4 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [50d2b5c4] + Lazy v0.15.1 [2ab3a3ac] ↑ LogExpFunctions v0.3.28 ⇒ v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [ffc61752] + Mustache v1.0.21 [a975b10e] + Mux v1.0.2 [510215fc] + Observables v0.5.5 [975b03d1] + OnlinePCA v0.3.10 [4d8831e6] + OpenSSL v1.5.0 [bac558e1] ↑ OrderedCollections v1.6.3 ⇒ v1.8.1 [90014a1f] ↑ PDMats v0.11.31 ⇒ v0.11.35 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [fa939f87] + Pidfile v1.3.0 [a03496cd] + PlotlyBase v0.8.21 [f0f68f2c] + PlotlyJS v0.18.16 [f2990250] + PlotlyKaleido v2.3.0 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] ↑ PtrArrays v1.2.0 ⇒ v1.3.0 [1fd47b50] ↑ QuadGK v2.10.1 ⇒ v2.11.2 [ae029012] + Requires v1.3.1 [79098fc4] ↑ Rmath v0.7.1 ⇒ v0.8.0 [91c51154] + SentinelArrays v1.4.8 [1277b4bf] + ShiftedArrays v2.0.0 [777ac1f9] + SimpleBufferStream v1.2.0 [276daf66] ↑ SpecialFunctions v2.4.0 ⇒ v2.5.1 [10745b16] ↑ Statistics v1.10.0 ⇒ v1.11.1 [82ae8749] ↑ StatsAPI v1.7.0 ⇒ v1.7.1 [2913bbd2] ↑ StatsBase v0.34.3 ⇒ v0.34.5 [4c63d2b9] ↑ StatsFuns v1.3.1 ⇒ v1.5.0 [3eaba693] + StatsModels v0.7.4 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [3bb67fe8] ↑ TranscodingStreams v0.11.2 ⇒ v0.11.3 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [ea10d353] + WeakRefStrings v1.4.2 [0f1e0344] + WebIO v0.8.21 [104b5d7c] + WebSockets v1.6.0 [cc8bc4a8] + Widgets v0.6.7 [76eceee3] + WorkerUtilities v1.6.1 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [f7e6163d] + Kaleido_jll v0.2.1+0 [7cb0a576] + MPICH_jll v4.3.1+0 [f1f71cc9] + MPItrampoline_jll v5.5.4+0 [c8ffd9c3] ↑ MbedTLS_jll v2.28.2+1 ⇒ v2.28.6+2 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.8+0 [efe28fd5] ↑ OpenSpecFun_jll v0.5.5+0 ⇒ v0.5.6+0 [f50d1b31] ↑ Rmath_jll v0.4.3+0 ⇒ v0.5.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] ↑ ArgTools v1.1.1 ⇒ v1.1.2 [56f22d72] ~ Artifacts ⇒ v1.11.0 [2a0f44e3] ~ Base64 ⇒ v1.11.0 [ade2ca70] ~ Dates ⇒ v1.11.0 [8ba89e20] + Distributed v1.11.0 [7b1f6079] ~ FileWatching ⇒ v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] ~ InteractiveUtils ⇒ v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [76f85450] ~ LibGit2 ⇒ v1.11.0 [8f399da3] ~ Libdl ⇒ v1.11.0 [37e2e46d] ~ LinearAlgebra ⇒ v1.12.0 [56ddb016] ~ Logging ⇒ v1.11.0 [d6f4376e] ~ Markdown ⇒ v1.11.0 [a63ad114] ~ Mmap ⇒ v1.11.0 [ca575930] ↑ NetworkOptions v1.2.0 ⇒ v1.3.0 [44cfe95a] ↑ Pkg v1.10.0 ⇒ v1.13.0 [de0858da] ~ Printf ⇒ v1.11.0 [3fa0cd96] ~ REPL ⇒ v1.11.0 [9a3f8284] ~ Random ⇒ v1.11.0 [9e88b42a] ~ Serialization ⇒ v1.11.0 [6462fe0b] ~ Sockets ⇒ v1.11.0 [2f01184e] ↑ SparseArrays v1.10.0 ⇒ v1.12.0 [f489334b] + StyledStrings v1.11.0 [8dfed614] ~ Test ⇒ v1.11.0 [cf7118a7] ~ UUIDs ⇒ v1.11.0 [4ec0a83e] ~ Unicode ⇒ v1.11.0 [e66e0078] ↑ CompilerSupportLibraries_jll v1.1.1+0 ⇒ v1.3.0+1 [deac9b47] ↑ LibCURL_jll v8.4.0+0 ⇒ v8.11.1+1 [e37daf67] ↑ LibGit2_jll v1.6.4+0 ⇒ v1.9.0+0 [29816b5a] ↑ LibSSH2_jll v1.11.0+1 ⇒ v1.11.3+1 [14a3606d] ↑ MozillaCACerts_jll v2023.1.10 ⇒ v2025.5.20 [4536629a] ↑ OpenBLAS_jll v0.3.23+4 ⇒ v0.3.29+0 [05823500] ↑ OpenLibm_jll v0.8.1+2 ⇒ v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] ↑ SuiteSparse_jll v7.2.1+1 ⇒ v7.8.3+2 [83775a58] ↑ Zlib_jll v1.2.13+1 ⇒ v1.3.1+2 [8e850b90] ↑ libblastrampoline_jll v5.8.0+1 ⇒ v5.13.1+0 [8e850ede] ↑ nghttp2_jll v1.52.0+1 ⇒ v1.64.0+1 [3f19e933] ↑ p7zip_jll v17.4.0+2 ⇒ v17.5.0+2 Test Successfully re-resolved Status `/tmp/jl_oogiUp/Project.toml` [c7e460c6] ArgParse v1.2.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [1a297f60] FillArrays v1.13.0 [4d4711f2] MatrixMarket v0.5.2 [975b03d1] OnlinePCA v0.3.10 [10745b16] Statistics v1.11.1 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_oogiUp/Manifest.toml` [66dad0bd] AliasTables v1.1.3 [c7e460c6] ArgParse v1.2.0 [bf4720bc] AssetRegistry v0.1.0 [d1d4a3ce] BitFlags v0.1.9 [ad839575] Blink v0.12.9 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [6b39b394] CodecZstd v0.8.6 [35d6a980] ColorSchemes v3.30.0 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.17.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [460bff9d] ExceptionUnwrapping v0.1.11 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [53c48c17] FixedPointNumbers v0.8.5 [de31a74c] FunctionalCollections v0.5.0 [38e38edf] GLM v1.9.0 [f67ccb44] HDF5 v0.17.2 [cd3eb016] HTTP v1.10.17 [9fb69e20] Hiccup v0.2.2 [34004b35] HypergeometricFunctions v0.3.28 [842dd82b] InlineStrings v1.4.4 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [97c1335a] JSExpr v0.5.4 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [50d2b5c4] Lazy v0.15.1 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [4d4711f2] MatrixMarket v0.5.2 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [ffc61752] Mustache v1.0.21 [a975b10e] Mux v1.0.2 [510215fc] Observables v0.5.5 [975b03d1] OnlinePCA v0.3.10 [4d8831e6] OpenSSL v1.5.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [69de0a69] Parsers v2.8.3 [fa939f87] Pidfile v1.3.0 [a03496cd] PlotlyBase v0.8.21 [f0f68f2c] PlotlyJS v0.18.16 [f2990250] PlotlyKaleido v2.3.0 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [91c51154] SentinelArrays v1.4.8 [1277b4bf] ShiftedArrays v2.0.0 [777ac1f9] SimpleBufferStream v1.2.0 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [3eaba693] StatsModels v0.7.4 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [62fd8b95] TensorCore v0.1.1 [b718987f] TextWrap v1.0.2 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [ea10d353] WeakRefStrings v1.4.2 [0f1e0344] WebIO v0.8.21 [104b5d7c] WebSockets v1.6.0 [cc8bc4a8] Widgets v0.6.7 [76eceee3] WorkerUtilities v1.6.1 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [f7e6163d] Kaleido_jll v0.2.1+0 [7cb0a576] MPICH_jll v4.3.1+0 [f1f71cc9] MPItrampoline_jll v5.5.4+0 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.8+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... /tmp/jl_9trWRy Running all tests... ####### Binarization of CSV (Julia API) ####### 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 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URIs 822.6 ms ✓ IteratorInterfaceExtensions 851.3 ms ✓ SimpleBufferStream 922.7 ms ✓ TensorCore 918.0 ms ✓ DataAPI 1105.0 ms ✓ WorkerUtilities 875.4 ms ✓ StatsAPI 3058.8 ms ✓ Crayons 927.4 ms ✓ BitFlags 7645.3 ms ✓ MacroTools 2057.7 ms ✓ ProgressMeter 1891.0 ms ✓ PtrArrays 3035.5 ms ✓ ConcurrentUtilities 1318.5 ms ✓ TranscodingStreams 953.3 ms ✓ ShiftedArrays 2214.0 ms ✓ Requires 1010.8 ms ✓ DelimitedFiles 5407.8 ms ✓ SentinelArrays 1114.8 ms ✓ LoggingExtras 1282.3 ms ✓ SuiteSparse 1203.4 ms ✓ Compat 1533.3 ms ✓ Preferences 1134.3 ms ✓ Pidfile 1542.8 ms ✓ FunctionalCollections 1837.2 ms ✓ ExceptionUnwrapping 2316.4 ms ✓ ArgParse 1051.6 ms ✓ Parameters 1559.5 ms ✓ FillArrays → FillArraysSparseArraysExt 8075.6 ms ✓ FixedPointNumbers 1331.0 ms ✓ Statistics → SparseArraysExt 931.2 ms ✓ FillArrays → FillArraysStatisticsExt 1359.3 ms ✓ LogExpFunctions 782.2 ms ✓ TableTraits 1071.1 ms ✓ Missings 1065.6 ms ✓ PooledArrays 5331.7 ms ✓ OpenSSL 5974.2 ms ✓ Lazy 1799.1 ms ✓ Hiccup 1018.0 ms ✓ AliasTables 964.0 ms ✓ CodecZlib 1781.6 ms ✓ PDMats 901.2 ms ✓ Compat → CompatLinearAlgebraExt 1595.5 ms ✓ MPIPreferences 886.0 ms ✓ PrecompileTools 1174.2 ms ✓ JLLWrappers 3653.3 ms ✓ ColorTypes 1781.7 ms ✓ Tables 1367.0 ms ✓ MatrixMarket 1447.8 ms ✓ FillArrays → FillArraysPDMatsExt 4237.6 ms ✓ DataStructures 2512.1 ms ✓ FilePathsBase 5402.5 ms ✓ StringManipulation 43894.6 ms ✓ Parsers 1508.5 ms ✓ Kaleido_jll 1557.6 ms ✓ Rmath_jll 1238.0 ms ✓ MicrosoftMPI_jll 1607.9 ms ✓ Zstd_jll 1693.4 ms ✓ MbedTLS_jll 1541.9 ms ✓ Hwloc_jll 4908.1 ms ✓ MPItrampoline_jll 2542.6 ms ✓ OpenSpecFun_jll 2523.4 ms ✓ libaec_jll 1590.3 ms ✓ ColorTypes → StyledStringsExt 15378.6 ms ✓ Colors 6749.7 ms ✓ ColorVectorSpace 1342.0 ms ✓ Mustache 1957.5 ms ✓ SortingAlgorithms 3105.4 ms ✓ QuadGK 3372.0 ms ✓ FilePathsBase → FilePathsBaseTestExt 1376.4 ms ✓ FilePathsBase → FilePathsBaseMmapExt 70698.9 ms ✓ PrettyTables 4139.0 ms ✓ JSON 1032.2 ms ✓ InlineStrings → ParsersExt 1978.7 ms ✓ Rmath 2527.4 ms ✓ CodecZstd 2960.8 ms ✓ MbedTLS 5300.4 ms ✓ OpenMPI_jll 6161.5 ms ✓ MPICH_jll 6621.0 ms ✓ SpecialFunctions 1907.2 ms ✓ Widgets 8891.9 ms ✓ ColorSchemes 5928.4 ms ✓ StatsBase 197851.7 ms ✓ DataFrames 1651.9 ms ✓ PlotlyKaleido 1072.1 ms ✓ AssetRegistry 2249.1 ms ✓ WeakRefStrings 58773.9 ms ✓ HTTP 7975.9 ms ✓ HDF5_jll 2659.9 ms ✓ HypergeometricFunctions 1631.7 ms ✓ ColorVectorSpace → SpecialFunctionsExt 13059.7 ms ✓ PlotlyBase 66781.9 ms ✓ CSV 4316.6 ms ✓ WebSockets 8040.0 ms ✓ Mux 23719.2 ms ✓ HDF5 4327.5 ms ✓ StatsFuns 14515.9 ms ✓ PlotlyBase → DataFramesExt 8720.1 ms ✓ WebIO 5356.0 ms ✓ StatsModels 11391.1 ms ✓ Distributions 6851.8 ms ✓ JSExpr 3734.7 ms ✓ Distributions → DistributionsTestExt 5382.6 ms ✓ GLM 8262.8 ms ✓ PlotlyBase → DistributionsExt 11564.7 ms ✓ Blink 17855.9 ms ✓ PlotlyJS 11438.8 ms ✓ PlotlyJS → CSVExt 18201.2 ms ✓ PlotlyJS → DataFramesExt 17448.8 ms ✓ OnlinePCA 122 dependencies successfully precompiled in 877 seconds. 38 already precompiled. 3 dependencies had output during precompilation: ┌ WebSockets │ WARNING: Imported binding Logging.termlength was undeclared at import time during import to WebSockets. │ WARNING: Imported binding Logging.showvalue was undeclared at import time during import to WebSockets. └ ┌ HTTP │ ┌ Info: Ignoring an error that occurred during the precompilation workload │ │ exception = │ │ HTTP.ConnectError for url = `https://localhost:57813`: IOError: connect: connection refused (ECONNREFUSED) │ │ Stacktrace: │ │ [1] getconnection(::Type{Sockets.TCPSocket}, host::SubString{String}, port::SubString{String}; keepalive::Bool, readtimeout::Int64, kw::@Kwargs{require_ssl_verification::Bool, iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.Connections ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:531 │ │ [2] getconnection │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:508 [inlined] │ │ [3] getconnection(::Type{OpenSSL.SSLStream}, host::SubString{String}, port::SubString{String}; kw::@Kwargs{require_ssl_verification::Bool, keepalive::Bool, readtimeout::Int64, iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.Connections ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:585 │ │ [4] getconnection │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:578 [inlined] │ │ [5] #13 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/Connections.jl:467 [inlined] │ │ [6] macro expansion │ │ @ ~/.julia/packages/ConcurrentUtilities/ofY4K/src/try_with_timeout.jl:92 [inlined] │ │ [7] (::ConcurrentUtilities.var"#try_with_timeout##2#try_with_timeout##3"{Any, Channel{Any}, HTTP.Connections.var"#13#14"{OpenSSL.SSLStream, Bool, Bool, @Kwargs{readtimeout::Int64, iofunction::Nothing, decompress::Nothing, verbose::Int64}, SubString{String}, SubString{String}}, Timer})() │ │ @ ConcurrentUtilities ~/.julia/packages/ConcurrentUtilities/ofY4K/src/ConcurrentUtilities.jl:10 │ │ Stacktrace: │ │ [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/ConnectionRequest.jl:88 │ │ [2] connections │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/ConnectionRequest.jl:60 [inlined] │ │ [3] (::Base.var"#46#47"{Base.var"#48#49"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ Base ./error.jl:323 │ │ [4] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.RetryRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RetryRequest.jl:75 │ │ [5] manageretries │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RetryRequest.jl:30 [inlined] │ │ [6] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.CookieRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/CookieRequest.jl:42 │ │ [7] managecookies │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/CookieRequest.jl:19 [inlined] │ │ [8] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Nothing, decompress::Nothing, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.HeadersRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/HeadersRequest.jl:71 │ │ [9] defaultheaders │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/HeadersRequest.jl:14 [inlined] │ │ [10] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.RedirectRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RedirectRequest.jl:25 │ │ [11] redirects │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/RedirectRequest.jl:14 [inlined] │ │ [12] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Nothing, body::Vector{UInt8}; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{}) │ │ @ HTTP.MessageRequest ~/.julia/packages/HTTP/JcAHX/src/clientlayers/MessageRequest.jl:35 │ │ [13] makerequest │ │ @ ~/.julia/packages/HTTP/JcAHX/src/clientlayers/MessageRequest.jl:24 [inlined] │ │ [14] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing; headers::Nothing, body::Vector{UInt8}, query::Nothing, kw::@Kwargs{}) │ │ @ HTTP ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:457 │ │ [15] request(stack::Function, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing) │ │ @ HTTP ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:455 │ │ [16] #request#21 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:315 [inlined] │ │ [17] request (repeats 2 times) │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:313 [inlined] │ │ [18] get │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:518 [inlined] │ │ [19] #51 │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:36 [inlined] │ │ [20] withenv(::HTTP.var"#51#52"{String}, ::Pair{String, Union{Nothing, String}}, ::Vararg{Pair{String, Union{Nothing, String}}}) │ │ @ Base ./env.jl:265 │ │ [21] macro expansion │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:35 [inlined] │ │ [22] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] │ │ [23] macro expansion │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:34 [inlined] │ │ [24] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] │ │ [25] top-level scope │ │ @ ~/.julia/packages/HTTP/JcAHX/src/precompile.jl:4 │ │ [26] include(mapexpr::Function, mod::Module, _path::String) │ │ @ Base ./Base.jl:306 │ │ [27] top-level scope │ │ @ ~/.julia/packages/HTTP/JcAHX/src/HTTP.jl:643 │ │ [28] include(mod::Module, _path::String) │ │ @ Base ./Base.jl:305 │ │ [29] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ │ @ Base ./loading.jl:2991 │ │ [30] top-level scope │ │ @ stdin:5 │ │ [31] eval(m::Module, e::Any) │ │ @ Core ./boot.jl:489 │ │ [32] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ │ @ Base ./loading.jl:2837 │ │ [33] include_string │ │ @ ./loading.jl:2847 [inlined] │ │ [34] exec_options(opts::Base.JLOptions) │ │ @ Base ./client.jl:319 │ │ [35] _start() │ └ @ Base ./client.jl:554 └ ┌ PlotlyBase → DistributionsExt │ WARNING: Constructor for type "Plot" was extended in `DistributionsExt` without explicit qualification or import. │ NOTE: Assumed "Plot" refers to `PlotlyBase.Plot`. This behavior is deprecated and may differ in future versions.` │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Plot end`. │ Hint: To silence the warning, qualify `Plot` as `PlotlyBase.Plot` in the method signature or explicitly `import PlotlyBase: Plot`. └ Parsed args: binfile => /tmp/jl_9trWRy/Data.zst csvfile => /tmp/jl_9trWRy/Data.csv 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 ####### Binarization of MM (Julia API) ####### ####### Binarization of MM (Command line) ####### Parsed args: mmfile => /tmp/jl_9trWRy/Data.mtx binfile => /tmp/jl_9trWRy/Data.mtx.zst ####### Binarization of Binary COO (Julia API) ####### ####### Binarization of Binary COO (Command line) ####### Parsed args: binfile => /tmp/jl_9trWRy/Data.bincoo.zst bincoofile => /tmp/jl_9trWRy/Data.bincoo ####### Summarization (Julia API) ####### 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Command line) ####### Parsed args: pseudocount => 1.0 binfile => /tmp/jl_9trWRy/Data.zst mode => dense outdir => /tmp/jl_2YAm2A 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Julia API) ####### 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### Summarization (Command line) ####### Parsed args: pseudocount => 1.0 binfile => /tmp/jl_9trWRy/Data.mtx.zst mode => sparse_mm outdir => /tmp/jl_8tWKlo 1 / 2 : Column-wise statistics are calculated... 2 / 2 : Row-wise statistics are calculated... ####### HVG (Julia API) ####### Highly Variable Genes are calculated... ####### HVG (Command line) ####### Parsed args: rowmeanlist => /tmp/jl_2YAm2A/Feature_Means.csv binfile => /tmp/jl_9trWRy/Data.zst rowcv2list => /tmp/jl_2YAm2A/Feature_CV2s.csv rowvarlist => /tmp/jl_2YAm2A/Feature_Vars.csv outdir => /tmp/jl_2YAm2A Highly Variable Genes are calculated... ####### Filtering (Julia API) ####### ####### Filtering (Command line) ####### Parsed args: samplelist => /tmp/jl_2YAm2A/Sample_NoCounts.csv thr1 => 10 direct2 => + direct1 => + thr2 => 10 outdir => /tmp/jl_2YAm2A input => /tmp/jl_9trWRy/Data.zst featurelist => /tmp/jl_2YAm2A/Feature_Means.csv Parsed args: samplelist => thr1 => 10 direct2 => + direct1 => + thr2 => 10 outdir => /tmp/jl_2YAm2A input => /tmp/jl_9trWRy/Data.zst featurelist => /tmp/jl_2YAm2A/Feature_Means.csv Parsed args: samplelist => /tmp/jl_2YAm2A/Sample_NoCounts.csv thr1 => 10 direct2 => + direct1 => + thr2 => 10 outdir => /tmp/jl_2YAm2A input => /tmp/jl_9trWRy/Data.zst featurelist => ####### GD (Julia API) ####### ####### GD (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "robbins-monro" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "momentum" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => "/tmp/jl_2YAm2A/Eigen_vectors.csv" colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "nag" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => "/tmp/jl_2YAm2A/Loadings.csv" cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "adagrad" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false ####### Oja (Julia API) ####### Progress: 1%|▎ | ETA: 0:03:00 Progress: 1%|▍ | ETA: 0:03:22 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:02:41 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:03:07 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:01:25 Progress: 100%|█████████████████████████████████████████| Time: 0:00:00 ####### Oja (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "robbins-monro" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:06:25 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "momentum" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:06:53 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "nag" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:08:34 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "adagrad" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:08:07 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 ####### SGD (Julia API) ####### Progress: 1%|▎ | ETA: 0:03:04 Progress: 1%|▍ | ETA: 0:03:48 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:03:53 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:04:19 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:02:42 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### SGD (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "robbins-monro" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:06:33 Progress: 1%|▍ | ETA: 0:05:20 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "momentum" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:07:03 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "nag" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:08:51 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "adagrad" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:10:01 Progress: 100%|█████████████████████████████████████████| Time: 0:00:04 ####### CCIPCA (Julia API) ####### Progress: 1%|▎ | ETA: 0:02:16 Progress: 1%|▍ | ETA: 0:03:14 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### CCIPCA (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 offsetStoch => 1.0f-15 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:09:16 Progress: 1%|▍ | ETA: 0:07:48 Progress: 100%|█████████████████████████████████████████| Time: 0:00:04 ####### RSGD (Julia API) ####### Progress: 1%|▎ | ETA: 0:10:07 Progress: 1%|▍ | ETA: 0:08:32 Progress: 100%|█████████████████████████████████████████| Time: 0:00:05 Progress: 1%|▎ | ETA: 0:04:04 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 Progress: 1%|▎ | ETA: 0:05:15 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:02:43 Progress: 100%|█████████████████████████████████████████| Time: 0:00:01 ####### RSGD (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "robbins-monro" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:12:36 Progress: 1%|▍ | ETA: 0:09:22 Progress: 100%|█████████████████████████████████████████| Time: 0:00:05 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "momentum" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:12:55 Progress: 100%|█████████████████████████████████████████| Time: 0:00:05 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "nag" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:13:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:05 Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "adagrad" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:13:02 Progress: 100%|█████████████████████████████████████████| Time: 0:00:05 ####### SVRG (Julia API) ####### Progress: 1%|▎ | ETA: 0:04:22 Progress: 1%|▍ | ETA: 0:05:00 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Progress: 1%|▎ | ETA: 0:05:37 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 Progress: 1%|▎ | ETA: 0:08:29 Progress: 100%|█████████████████████████████████████████| Time: 0:00:03 Progress: 1%|▎ | ETA: 0:06:06 Progress: 100%|█████████████████████████████████████████| Time: 0:00:02 ####### SVRG (Command line) ####### Parsed args: logdir => "/tmp/jl_2YAm2A" scale => "ftt" upper => 1.0f38 scheduling => "robbins-monro" offsetStoch => 1.0f-6 outdir => "/tmp/jl_2YAm2A" rowvarlist => "" lower => 0 initV => nothing cper => 1.0f0 pseudocount => 1.0f0 numbatch => 100 g => 0.9f0 offsetFull => 1.0f-20 initW => nothing colsumlist => "" input => "/tmp/jl_9trWRy/Data.zst" numepoch => "1" evalfreq => 5000 stepsize => "1.0e-15" rowmeanlist => "/tmp/jl_2YAm2A/Feature_FTTMeans.csv" expvar => 0.1f0 epsilon => 1.0f-8 dim => "3" perm => false Progress: 1%|▎ | ETA: 0:14:34 Progress: 1%|▍ | ETA: 0:11:10 Progress: 100%|█████████████████████████████████████████| Time: 0:00:06 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1782 running 1 of 1 signal (10): User defined signal 1 egal_types at /source/src/builtins.c:180 ijl_types_equal at /source/src/subtype.c:2323 jl_specializations_get_linfo_ at /source/src/gf.c:237 jl_restore_system_image_from_stream_ at /source/src/staticdata.c:4164 jl_restore_package_image_from_stream at /source/src/staticdata.c:4416 jl_restore_incremental_from_buf at /source/src/staticdata.c:4485 ijl_restore_package_image_from_file at /source/src/staticdata.c:4552 #_include_from_serialized#862 at ./loading.jl:1270 _include_from_serialized at ./loading.jl:1246 [inlined] #_require_search_from_serialized#878 at ./loading.jl:2070 _require_search_from_serialized at ./loading.jl:1977 jfptr__require_search_from_serialized_89007.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 __require_prelocked at ./loading.jl:2595 _require_prelocked at ./loading.jl:2461 macro expansion at ./loading.jl:2389 [inlined] macro expansion at ./lock.jl:376 [inlined] __require at ./loading.jl:2354 jfptr___require_100683.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] jl_f_invoke_in_world at /source/src/builtins.c:894 require at ./loading.jl:2330 jfptr_require_83570.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] call_require at /source/src/toplevel.c:494 [inlined] eval_import_path at /source/src/toplevel.c:532 jl_toplevel_eval_flex at /source/src/toplevel.c:830 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:305 exec_options at ./client.jl:321 _start at ./client.jl:554 jfptr__start_81451.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x790010167249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 812 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 #run#703 at ./process.jl:513 run at ./process.jl:510 unknown function (ip: 0x7e55b1b249fb) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:306 IncludeInto at ./Base.jl:307 jfptr_IncludeInto_102481.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:306 IncludeInto at ./Base.jl:307 jfptr_IncludeInto_102481.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 exec_options at ./client.jl:287 _start at ./client.jl:554 jfptr__start_81451.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7e55b2de3249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 jfptr_wait_84416.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 subprocess_handler at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2476 unknown function (ip: 0x77768dba22d3) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 #213 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2416 withenv at ./env.jl:265 #198 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2237 with_temp_env at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2087 #194 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2196 #mktempdir#21 at ./file.jl:899 unknown function (ip: 0x77768db9cf8c) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 mktempdir at ./file.jl:895 mktempdir at ./file.jl:895 #sandbox#190 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2143 [inlined] sandbox at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2135 unknown function (ip: 0x77768db936d1) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 #test#201 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2401 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] #test#170 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:490 unknown function (ip: 0x77768db93301) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 #test#84 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 unknown function (ip: 0x77768db88d98) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:153 #test#82 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] #test#81 at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] test at /source/usr/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 unknown function (ip: 0x77768db882af) at (unknown file) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 eval_body at /source/src/interpreter.c:558 eval_body at /source/src/interpreter.c:558 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:305 exec_options at ./client.jl:321 _start at ./client.jl:554 jfptr__start_81451.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7776966c6249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000077767bc00010 Total snapshots: 97. Utilization: 0% ╎97 @Base/client.jl:554 _start() ╎ 97 @Base/client.jl:321 exec_options(opts::Base.JLOptions) ╎ 97 @Base/Base.jl:305 include(mod::Module, _path::String) ╎ 97 @Base/loading.jl:2897 _include(mapexpr::Function, mod::Module, _path:… ╎ 97 @Base/loading.jl:2837 include_string(mapexpr::typeof(identity), mod:… ╎ 97 @Base/boot.jl:489 eval(m::Module, e::Any) ╎ ╎ 97 @Pkg/src/API.jl:151 kwcall(::@NamedTuple{julia_args::Cmd}, ::typeo… ╎ ╎ 97 @Pkg/src/API.jl:151 #test#81 ╎ ╎ 97 @Pkg/src/API.jl:152 test ╎ ╎ 97 @Pkg/src/API.jl:152 test(pkgs::Vector{String}; kwargs::Base.Pai… ╎ ╎ 97 @Pkg/src/API.jl:153 kwcall(::@NamedTuple{julia_args::Cmd}, ::t… ╎ ╎ ╎ 97 @Pkg/src/API.jl:164 test(pkgs::Vector{PackageSpec}; io::IOCon… ╎ ╎ ╎ 97 @Pkg/src/API.jl:490 kwcall(::@NamedTuple{julia_args::Cmd, io… ╎ ╎ ╎ 97 @Pkg/src/API.jl:511 test(ctx::Pkg.Types.Context, pkgs::Vect… ╎ ╎ ╎ 97 @Pkg/…perations.jl:2313 test ╎ ╎ ╎ 97 @Pkg/…perations.jl:2401 test(ctx::Pkg.Types.Context, pkgs… ╎ ╎ ╎ ╎ 97 @Pkg/…erations.jl:2135 kwcall(::@NamedTuple{preferences:… ╎ ╎ ╎ ╎ 97 @Pkg/…erations.jl:2143 #sandbox#190 ╎ ╎ ╎ ╎ 97 @Base/file.jl:895 mktempdir(fn::Function) ╎ ╎ ╎ ╎ 97 @Base/file.jl:895 mktempdir(fn::Function, parent::Str… ╎ ╎ ╎ ╎ 97 @Base/file.jl:899 mktempdir(fn::Pkg.Operations.var"#… ╎ ╎ ╎ ╎ ╎ 97 @Pkg/…ations.jl:2196 (::Pkg.Operations.var"#194#195… ╎ ╎ ╎ ╎ ╎ 97 @Pkg/…ations.jl:2087 with_temp_env(fn::Pkg.Operati… ╎ ╎ ╎ ╎ ╎ 97 @Pkg/…tions.jl:2237 (::Pkg.Operations.var"#198#19… ╎ ╎ ╎ ╎ ╎ 97 @Base/env.jl:265 withenv(::Pkg.Operations.var"#2… ╎ ╎ ╎ ╎ ╎ 97 @Pkg/…tions.jl:2416 (::Pkg.Operations.var"#213#… ╎ ╎ ╎ ╎ ╎ ╎ 97 @Pkg/…ions.jl:2476 subprocess_handler(cmd::Cmd… ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…ess.jl:687 wait(x::Base.Process) ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…ess.jl:694 wait(x::Base.Process, sync… ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…on.jl:136 wait ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…on.jl:141 wait(c::Base.GenericCondi… ╎ ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…sk.jl:1199 wait() 96╎ ╎ ╎ ╎ ╎ ╎ ╎ 97 @Base/…sk.jl:1187 poptask(W::Base.Intrus… [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1187 wait at ./task.jl:1199 #wait#398 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:331 #start_profile_listener##0 at ./Base.jl:351 jfptr_YY.start_profile_listenerYY.YY.0_48105.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 32324528 (Pool: 32323783; Big: 745); GC: 42 [812] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/test/test_svrg.jl:66 [1782] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/OnlinePCA/AhPWT/bin/svrg:145 _ZN4llvm11Instruction16swapProfMetadataEv at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) unknown function (ip: 0x26c586f) at (unknown file) unknown function (ip: (nil)) at (unknown file) Allocations: 17115980 (Pool: 17115724; Big: 256); GC: 11 _ZN12_GLOBAL__N_114MachineSinking20runOnMachineFunctionERN4llvm15MachineFunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm19MachineFunctionPass13runOnFunctionERNS_8FunctionE.part.0 at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) _ZN4llvm3orc14SimpleCompilerclERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM.so.18.1jl (unknown line) operator() at /source/src/jitlayers.cpp:1561 addModule at /source/src/jitlayers.cpp:2044 jl_compile_codeinst_now at /source/src/jitlayers.cpp:626 jl_compile_codeinst_impl at /source/src/jitlayers.cpp:824 jl_compile_method_internal at /source/src/gf.c:3615 _jl_invoke at /source/src/gf.c:4092 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] jl_f_invokelatest at /source/src/builtins.c:875 profile_printing_listener at ./Base.jl:333 #start_profile_listener##0 at ./Base.jl:351 jfptr_YY.start_profile_listenerYY.YY.0_48105.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 71540234 (Pool: 71539205; Big: 1029); GC: 56 PkgEval terminated after 2733.52s: test duration exceeded the time limit