Package evaluation of MRIReco on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-14T22:26:19.642 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... ┌ Warning: could not download https://pkg.julialang.org/registries │ exception = RequestError: Could not resolve host: pkg.julialang.org while requesting https://pkg.julialang.org/registries └ @ Pkg.Registry /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Registry/Registry.jl:77 Set-up completed after 8.65s ################################################################################ # Installation # Installing MRIReco... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [bdf86e05] + MRIReco v0.9.0 Updating `~/.julia/environments/v1.12/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [7f219486] + AbstractNFFTs v0.8.2 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [4fba245c] + ArrayInterface v7.19.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [26cce99e] + BasicInterpolators v0.7.1 [0e736298] + Bessels v0.2.8 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] + CPUSummary v0.2.6 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [adafc99b] + CpuId v0.3.1 [717857b8] + DSP v0.8.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [e2ba6199] + ExprTools v0.1.10 [7a1cc6ca] + FFTW v1.9.0 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [9aa1b823] + FastClosures v0.3.2 [1a297f60] + FillArrays v1.13.0 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [42fd0dbc] + IterativeSolvers v0.9.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b14d175d] + JuliaVariables v0.2.4 [10f19ff3] + LayoutPointers v0.1.17 [a4a2c56f] + LinearOperatorCollection v2.1.0 [5c8ed15e] + LinearOperators v2.10.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [898213cb] + LowRankApprox v0.5.5 [e65ccdef] + LowRankMatrices v1.0.2 [d8e11817] + MLStyle v0.4.17 [f7771a9a] + MRIBase v0.4.4 [fb1137e3] + MRIOperators v0.3.0 [bdf86e05] + MRIReco v0.9.0 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [c03570c3] + Memoize v0.4.4 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [efe261a4] + NFFT v0.13.7 [7424e34d] + NFFTTools v0.2.6 [71a1bf82] + NameResolution v0.1.5 [4d1e1d77] + Nullables v1.0.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [f27b6e38] + Polynomials v4.1.0 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [8162dcfd] + PrettyPrint v0.2.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [b3c3ace0] + RangeArrays v0.3.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [1e9c538a] + RegularizedLeastSquares v0.16.8 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [94e857df] + SIMDTypes v0.1.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [171d559e] + SplittablesBase v0.1.15 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [a759f4b9] + TimerOutputs v0.5.29 [28d57a85] + Transducers v0.4.84 [1986cc42] + Unitful v1.23.1 [3d5dd08c] + VectorizationBase v0.21.71 [29a6e085] + Wavelets v0.10.1 [f5851436] + FFTW_jll v3.3.11+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.13.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.5.20 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.5.1+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 4.71s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:75 ┌ Error: Failed to use TestEnv.jl; test dependencies will not be precompiled │ exception = │ Unsatisfiable requirements detected for package MRISimulation [8988da37]: │ MRISimulation [8988da37] log: │ ├─possible versions are: 0.1.0 - 0.1.2 or uninstalled │ ├─restricted to versions * by project [f4036597], leaving only versions: 0.1.0 - 0.1.2 │ │ └─project [f4036597] log: │ │ ├─possible versions are: 0.0.0 or uninstalled │ │ └─project [f4036597] is fixed to version 0.0.0 │ └─restricted by compatibility requirements with MRIOperators [fb1137e3] to versions: uninstalled — no versions left │ └─MRIOperators [fb1137e3] log: │ ├─possible versions are: 0.1.0 - 0.3.0 or uninstalled │ └─restricted to versions 0.3 by project [f4036597], leaving only versions: 0.3.0 │ └─project [f4036597] log: see above │ Stacktrace: │ [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) │ @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1121 │ [2] propagate_constraints! (repeats 2 times) │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1056 [inlined] │ [3] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) │ @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1622 │ [4] simplify_graph! (repeats 2 times) │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1621 [inlined] │ [5] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:527 │ [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) │ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1922 │ [7] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1901 [inlined] │ [8] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) │ @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:417 │ [9] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:389 [inlined] │ [10] up │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [inlined] │ [11] #resolve#167 │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:423 [inlined] │ [12] resolve │ @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:422 [inlined] │ [13] activate(pkg::String; allow_reresolve::Bool) │ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:80 │ [14] activate(pkg::String) │ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.11/activate_set.jl:9 │ [15] top-level scope │ @ /PkgEval.jl/scripts/precompile.jl:24 │ [16] include(mod::Module, _path::String) │ @ Base ./Base.jl:305 │ [17] exec_options(opts::Base.JLOptions) │ @ Base ./client.jl:321 │ [18] _start() │ @ Base ./client.jl:554 └ @ Main /PkgEval.jl/scripts/precompile.jl:26 Precompiling package dependencies... Precompiling packages... ✗ RegularizedLeastSquares ✗ MRIReco 0 dependencies successfully precompiled in 155 seconds. 172 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: MRIReco Failed to precompile MRIReco [bdf86e05-2d2b-5731-a332-f3fe1f9e047f] to "/home/pkgeval/.julia/compiled/v1.12/MRIReco/jl_EnBE1j". julia: /source/src/gf.c:2747: method_morespecific_via_interferences: Assertion `result == ijl_method_morespecific(target_method, start_method)' failed. [53] signal 6 (-6): Aborted in expression starting at none:1 unknown function (ip: 0x721bd68fdebc) at /lib/x86_64-linux-gnu/libc.so.6 gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x721bd6899394) at /lib/x86_64-linux-gnu/libc.so.6 __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) method_morespecific_via_interferences at /source/src/gf.c:2747 ml_matches at /source/src/gf.c:4897 ml_matches at /source/src/gf.c:4746 [inlined] ijl_matching_methods at /source/src/gf.c:3213 [inlined] ijl_matching_methods at /source/src/gf.c:3200 _methods_by_ftype at ./runtime_internals.jl:1406 [inlined] _findall at ./../usr/share/julia/Compiler/src/methodtable.jl:97 [inlined] #findall#5 at ./../usr/share/julia/Compiler/src/methodtable.jl:70 [inlined] findall at ./../usr/share/julia/Compiler/src/methodtable.jl:70 [inlined] #findall#7 at ./../usr/share/julia/Compiler/src/methodtable.jl:111 findall at ./../usr/share/julia/Compiler/src/methodtable.jl:102 [inlined] find_simple_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:386 jfptr_find_simple_method_matches_43045.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_invoke at /source/src/gf.c:4107 tojlinvoke123084.1 at /opt/julia/lib/julia/sys.so (unknown line) j_find_simple_method_matches_115294.1 at /opt/julia/lib/julia/sys.so (unknown line) #find_method_matches#132 at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:348 [inlined] find_method_matches at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:342 [inlined] abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:120 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2782 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2889 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2882 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3042 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3060 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3389 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3828 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3785 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4335 jfptr_typeinf_local_120374.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4493 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1259 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1442 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1451 jfptr_typeinf_ext_toplevel_121101.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3602 _jl_invoke at /source/src/gf.c:4092 [inlined] ijl_apply_generic at /source/src/gf.c:4300 GeneratedFunctionStub at ./expr.jl:1694 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_call_staged at /source/src/method.c:662 ijl_code_for_staged at /source/src/method.c:735 call_get_staged at ./../usr/share/julia/Compiler/src/utilities.jl:103 [inlined] get_staged at ./../usr/share/julia/Compiler/src/utilities.jl:88 jfptr_get_staged_41986.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_invoke at /source/src/gf.c:4107 tojlinvoke123070.1 at /opt/julia/lib/julia/sys.so (unknown line) j_get_staged_115348.1 at /opt/julia/lib/julia/sys.so (unknown line) retrieve_code_info at ./../usr/share/julia/Compiler/src/utilities.jl:121 InferenceState at ./../usr/share/julia/Compiler/src/inferencestate.jl:602 [inlined] typeinf_edge at ./../usr/share/julia/Compiler/src/typeinfer.jl:963 abstract_call_method at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:735 infercalls at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:167 abstract_call_gf_by_type at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:338 abstract_call_known at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2782 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2889 abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:2882 [inlined] abstract_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3042 abstract_eval_call at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3060 [inlined] abstract_eval_statement_expr at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3389 abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3828 [inlined] abstract_eval_basic_statement at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:3785 [inlined] typeinf_local at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4335 jfptr_typeinf_local_120374.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 typeinf at ./../usr/share/julia/Compiler/src/abstractinterpretation.jl:4493 typeinf_ext at ./../usr/share/julia/Compiler/src/typeinfer.jl:1259 typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1442 [inlined] typeinf_ext_toplevel at ./../usr/share/julia/Compiler/src/typeinfer.jl:1451 jfptr_typeinf_ext_toplevel_121101.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] jl_type_infer at /source/src/gf.c:462 jl_compile_method_internal at /source/src/gf.c:3602 _jl_invoke at /source/src/gf.c:4092 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] jl_f__apply_iterate at /source/src/builtins.c:862 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 EvalInto at ./boot.jl:494 jfptr_EvalInto_66137.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:306 IncludeInto at ./Base.jl:307 jfptr_IncludeInto_102481.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_eval_module_expr at /source/src/toplevel.c:197 [inlined] jl_toplevel_eval_flex at /source/src/toplevel.c:814 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 _include at ./loading.jl:2897 include at ./Base.jl:305 include_package_for_output at ./loading.jl:2991 jfptr_include_package_for_output_83125.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] do_call at /source/src/interpreter.c:123 eval_value at /source/src/interpreter.c:243 eval_stmt_value at /source/src/interpreter.c:194 [inlined] eval_body at /source/src/interpreter.c:693 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1035 jl_toplevel_eval_flex at /source/src/toplevel.c:975 ijl_toplevel_eval at /source/src/toplevel.c:1047 ijl_toplevel_eval_in at /source/src/toplevel.c:1092 eval at ./boot.jl:489 include_string at ./loading.jl:2837 include_string at ./loading.jl:2847 [inlined] exec_options at ./client.jl:319 _start at ./client.jl:554 jfptr__start_81451.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4100 [inlined] ijl_apply_generic at /source/src/gf.c:4300 jl_apply at /source/src/julia.h:2375 [inlined] true_main at /source/src/jlapi.c:971 jl_repl_entrypoint at /source/src/jlapi.c:1139 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x721bd689a249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S Allocations: 18637076 (Pool: 18636822; Big: 254); GC: 13 ERROR: LoadError: Failed to precompile RegularizedLeastSquares [1e9c538a-f78c-5de5-8ffb-0b6dbe892d23] to "/home/pkgeval/.julia/compiled/v1.12/RegularizedLeastSquares/jl_prfmwc". Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3278 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2647 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114 [7] #invokelatest_gr#232 @ ./reflection.jl:1282 [inlined] [8] invokelatest_gr @ ./reflection.jl:1274 [inlined] [9] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3849 [10] maybe_cachefile_lock @ ./loading.jl:3846 [inlined] [11] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2633 [12] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [13] macro expansion @ ./loading.jl:2389 [inlined] [14] macro expansion @ ./lock.jl:376 [inlined] [15] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [16] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [17] top-level scope @ ~/.julia/packages/MRIReco/9MaIr/src/MRIReco.jl:10 [18] include(mod::Module, _path::String) @ Base ./Base.jl:305 [19] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [20] top-level scope @ stdin:5 [21] eval(m::Module, e::Any) @ Core ./boot.jl:489 [22] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [23] include_string @ ./loading.jl:2847 [inlined] [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [25] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/MRIReco/9MaIr/src/MRIReco.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 172.47s ################################################################################ # Testing # Testing MRIReco Test Could not use exact versions of packages in manifest, re-resolving. Note: if you do not check your manifest file into source control, then you can probably ignore this message. However, if you do check your manifest file into source control, then you probably want to pass the `allow_reresolve = false` kwarg when calling the `Pkg.test` function. Testing failed after 6.3s ERROR: LoadError: Unsatisfiable requirements detected for package MRISimulation [8988da37]: MRISimulation [8988da37] log: ├─possible versions are: 0.1.0 - 0.1.2 or uninstalled ├─restricted to versions * by project [bc0d514b], leaving only versions: 0.1.0 - 0.1.2 │ └─project [bc0d514b] log: │ ├─possible versions are: 0.0.0 or uninstalled │ └─project [bc0d514b] is fixed to version 0.0.0 └─restricted by compatibility requirements with MRIOperators [fb1137e3] to versions: uninstalled — no versions left └─MRIOperators [fb1137e3] log: ├─possible versions are: 0.1.0 - 0.3.0 or uninstalled └─restricted to versions 0.3 by project [bc0d514b], leaving only versions: 0.3.0 └─project [bc0d514b] log: see above Stacktrace: [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1121 [2] propagate_constraints! (repeats 2 times) @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1056 [inlined] [3] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1622 [4] simplify_graph! (repeats 2 times) @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1621 [inlined] [5] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:527 [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1922 [7] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1901 [inlined] [8] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:417 [9] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:389 [inlined] [10] #up#49 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [inlined] [11] (::Pkg.Operations.var"#198#199"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2227 [12] with_temp_env(fn::Pkg.Operations.var"#198#199"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2087 [13] (::Pkg.Operations.var"#194#195"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2196 [14] mktempdir(fn::Pkg.Operations.var"#194#195"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [15] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:895 [16] #sandbox#190 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2143 [inlined] [17] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2401 [18] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 [20] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [21] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [22] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [23] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [24] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [25] include(mod::Module, _path::String) @ Base ./Base.jl:305 [26] exec_options(opts::Base.JLOptions) @ Base ./client.jl:321 [27] _start() @ Base ./client.jl:554 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 caused by: Unsatisfiable requirements detected for package MRISimulation [8988da37]: MRISimulation [8988da37] log: ├─possible versions are: 0.1.0 - 0.1.2 or uninstalled ├─restricted to versions * by project [bc0d514b], leaving only versions: 0.1.0 - 0.1.2 │ └─project [bc0d514b] log: │ ├─possible versions are: 0.0.0 or uninstalled │ └─project [bc0d514b] is fixed to version 0.0.0 └─restricted by compatibility requirements with MRIOperators [fb1137e3] to versions: uninstalled — no versions left └─MRIOperators [fb1137e3] log: ├─possible versions are: 0.1.0 - 0.3.0 or uninstalled └─restricted to versions 0.3 by project [bc0d514b], leaving only versions: 0.3.0 └─project [bc0d514b] log: see above Stacktrace: [1] propagate_constraints!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; log_events::Bool, err_msg_preamble::String) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1121 [2] propagate_constraints! (repeats 2 times) @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1056 [inlined] [3] simplify_graph!(graph::Pkg.Resolve.Graph, sources::Set{Int64}; validate_versions::Bool) @ Pkg.Resolve /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1622 [4] simplify_graph! (repeats 2 times) @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Resolve/graphtype.jl:1621 [inlined] [5] resolve_versions!(env::Pkg.Types.EnvCache, registries::Vector{Pkg.Registry.RegistryInstance}, pkgs::Vector{PackageSpec}, julia_version::VersionNumber, installed_only::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:527 [6] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}, level::UpgradeLevel; skip_writing_project::Bool, preserve::Nothing) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1922 [7] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:1901 [inlined] [8] up(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; level::UpgradeLevel, mode::PackageMode, preserve::Nothing, update_registry::Bool, skip_writing_project::Bool, kwargs::@Kwargs{io::Base.DevNull}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:417 [9] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:389 [inlined] [10] up @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:169 [inlined] [11] #resolve#167 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:423 [inlined] [12] resolve @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:422 [inlined] [13] (::Pkg.Operations.var"#198#199"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec})() @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2212 [14] with_temp_env(fn::Pkg.Operations.var"#198#199"{String, Pkg.Types.EnvCache, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec}, temp_env::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2087 [15] (::Pkg.Operations.var"#194#195"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String})(tmp::String) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2196 [16] mktempdir(fn::Pkg.Operations.var"#194#195"{Dict{String, Any}, Bool, Bool, Bool, Pkg.Operations.var"#213#214"{Bool, Cmd, Cmd, Nothing, Pkg.Types.Context, Vector{Tuple{String, Base.Process}}, String, PackageSpec}, Pkg.Types.Context, PackageSpec, String, String}, parent::String; prefix::String) @ Base.Filesystem ./file.jl:899 [17] mktempdir(fn::Function, parent::String) @ Base.Filesystem ./file.jl:895 [18] #sandbox#190 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2143 [inlined] [19] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2401 [20] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] [21] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 [22] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [23] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [24] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [25] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [26] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [27] include(mod::Module, _path::String) @ Base ./Base.jl:305 [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:321 [29] _start() @ Base ./client.jl:554 PkgEval failed after 250.03s: networking-related issues were detected