Package evaluation of GeoClustering on Julia 1.12.0-rc1.2 (995ff9db19*) started at 2025-07-15T00:32:31.463 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.47s ################################################################################ # Installation # Installing GeoClustering... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [7472b188] + GeoClustering v0.5.2 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.15.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 ⌅ [ec485272] + ArnoldiMethod v0.2.0 [4fba245c] + ArrayInterface v7.19.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [0e736298] + Bessels v0.2.8 [324d7699] + CategoricalArrays v0.10.8 [d360d2e6] + ChainRulesCore v1.25.2 [7a955b69] + CircularArrays v1.4.0 [aaaa29a8] + Clustering v0.15.8 [5900dafe] + CoDa v1.5.0 [3da002f7] + ColorTypes v0.12.1 ⌅ [9cc86067] + ColumnSelectors v0.1.1 [861a8166] + Combinatorics v1.0.3 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.17.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌅ [6cb2f572] + DataScienceTraits v0.1.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [ab46fb84] + DensityRatioEstimation v1.3.1 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.7.2 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.5 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [46192b85] + GPUArraysCore v0.2.0 [7472b188] + GeoClustering v0.5.2 ⌅ [323cb8eb] + GeoStatsBase v0.35.3 ⌃ [e502b557] + GeoTables v1.9.1 [34004b35] + HypergeometricFunctions v0.3.28 [313cdc1a] + Indexing v1.1.1 [22cec73e] + InitialValues v0.3.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.4.0 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [30fc2ffe] + LossFunctions v0.11.2 [e80e1ace] + MLJModelInterface v1.11.1 [1914dd2f] + MacroTools v0.5.16 ⌅ [eacbb407] + Meshes v0.35.21 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.10.0 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.22 [2f6b4ddb] + NelderMead v0.4.0 [6fe1bfb0] + OffsetArrays v1.17.0 [429524aa] + Optim v1.13.2 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [321657f4] + ScientificTypes v3.1.0 [30f210dd] + ScientificTypesBase v3.0.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [03a91e81] + SplitApplyCombine v1.2.3 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [88034a9c] + StringDistances v0.11.3 [892a3eda] + StringManipulation v0.4.1 ⌅ [e5d66e97] + TableDistances v0.2.1 [3783bdb8] + TableTraits v1.0.1 ⌃ [0d432bfd] + TableTransforms v1.21.0 [bd369af6] + Tables v1.12.1 [28d57a85] + Transducers v0.4.84 [28dd2a49] + TransformsBase v1.6.0 [9d95f2ec] + TypedTables v1.4.6 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.23.1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [8e850b90] + libblastrampoline_jll v5.13.1+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 4.61s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 1 direct dependency failed to precompile: BetaML Failed to precompile BetaML [024491cd-cc6b-443e-8034-08ea7eb7db2b] to "/home/pkgeval/.julia/compiled/v1.12/BetaML/jl_zmy92D". [ Info: Beginning BetaML PrecompileTool workflow.... ERROR: LoadError: MethodError: objects of type Module are not callable The object of type `Module` exists, but no method is defined for this combination of argument types when trying to treat it as a callable object. Stacktrace: [1] backward(layer::BetaML.Nn.VectorFunctionLayer{0, typeof(BetaML.Utils.softmax), typeof(BetaML.Utils.dsoftmax), Nothing, Float64}, x::Vector{Float64}, next_gradient::Vector{Float64}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/default_layers/VectorFunctionLayer.jl:102 [2] get_gradient(nn::BetaML.Nn.NN, x::Vector{Float64}, y::Vector{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:493 [3] get_batchgradient(nn::BetaML.Nn.NN, xbatch::Matrix{Float64}, ybatch::Matrix{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:530 [4] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:718 [inlined] [5] macro expansion @ ~/.julia/packages/ProgressMeter/kniaW/src/ProgressMeter.jl:1021 [inlined] [6] train!(nn::BetaML.Nn.NN, x::Matrix{Float64}, y::Matrix{Bool}; epochs::Int64, batch_size::Int64, sequential::Bool, nepochs_ran::Int64, verbosity::BetaML.Api.Verbosity, cb::typeof(BetaML.Nn.fitting_info), onfail::String, fail_epoch::Int64, fail_threshold::Float64, opt_alg::BetaML.Nn.ADAM, rng::Random.TaskLocalRNG) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:703 [7] fit!(m::BetaML.Nn.NeuralNetworkEstimator, X::Matrix{Float64}, Y::Matrix{Bool}) @ BetaML.Nn ~/.julia/packages/BetaML/3Lb3h/src/Nn/Nn.jl:1174 [8] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:13 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:7 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:118 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [14] top-level scope @ ~/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:78 [15] include(mod::Module, _path::String) @ Base ./Base.jl:305 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2991 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2837 [20] include_string @ ./loading.jl:2847 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:319 [22] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/Precompilation.jl:1 in expression starting at /home/pkgeval/.julia/packages/BetaML/3Lb3h/src/BetaML.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 287.64s ################################################################################ # Testing # Testing GeoClustering Status `/tmp/jl_dVxHYg/Project.toml` [024491cd] BetaML v0.12.2 [324d7699] CategoricalArrays v0.10.8 [7472b188] GeoClustering v0.5.2 ⌅ [323cb8eb] GeoStatsBase v0.35.3 ⌃ [e502b557] GeoTables v1.9.1 [add582a8] MLJ v0.20.8 [d354fa79] MLJClusteringInterface v0.1.13 ⌅ [eacbb407] Meshes v0.35.21 ⌅ [e5d66e97] TableDistances v0.2.1 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_dVxHYg/Manifest.toml` [47edcb42] ADTypes v1.15.0 [da404889] ARFFFiles v1.5.0 [621f4979] AbstractFFTs v1.5.0 [1520ce14] AbstractTrees v0.4.5 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.5.0 ⌅ [ec485272] ArnoldiMethod v0.2.0 [4fba245c] ArrayInterface v7.19.0 [a9b6321e] Atomix v1.1.1 [39de3d68] AxisArrays v0.4.7 [198e06fe] BangBang v0.4.4 [9718e550] Baselet v0.1.1 [0e736298] Bessels v0.2.8 [024491cd] BetaML v0.12.2 [d1d4a3ce] BitFlags v0.1.9 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [2a0fbf3d] CPUSummary v0.2.6 [324d7699] CategoricalArrays v0.10.8 [af321ab8] CategoricalDistributions v0.1.15 [082447d4] ChainRules v1.72.5 [d360d2e6] ChainRulesCore v1.25.2 [7a955b69] CircularArrays v1.4.0 [fb6a15b2] CloseOpenIntervals v0.1.13 [aaaa29a8] Clustering v0.15.8 [5900dafe] CoDa v1.5.0 [944b1d66] CodecZlib v0.7.8 [3da002f7] ColorTypes v0.12.1 ⌅ [9cc86067] ColumnSelectors v0.1.1 [861a8166] Combinatorics v1.0.3 [bbf7d656] CommonSubexpressions v0.3.1 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.17.0 [a33af91c] CompositionsBase v0.1.2 [ed09eef8] ComputationalResources v0.3.2 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.6.0 [6add18c4] ContextVariablesX v0.1.3 [adafc99b] CpuId v0.3.1 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌅ [6cb2f572] DataScienceTraits v0.1.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [244e2a9f] DefineSingletons v0.1.2 [8bb1440f] DelimitedFiles v1.9.1 [ab46fb84] DensityRatioEstimation v1.3.1 [85a47980] Dictionaries v0.4.5 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.7.2 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.5 [792122b4] EarlyStopping v0.3.0 [4e289a0a] EnumX v1.0.5 [460bff9d] ExceptionUnwrapping v0.1.11 [cc61a311] FLoops v0.2.2 [b9860ae5] FLoopsBase v0.1.1 [33837fe5] FeatureSelection v0.2.2 [5789e2e9] FileIO v1.17.0 [48062228] FilePathsBase v0.9.24 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [9dda63f9] ForceImport v0.0.3 [f6369f11] ForwardDiff v1.0.1 [46192b85] GPUArraysCore v0.2.0 [7472b188] GeoClustering v0.5.2 ⌅ [323cb8eb] GeoStatsBase v0.35.3 ⌃ [e502b557] GeoTables v1.9.1 [cd3eb016] HTTP v1.10.17 [076d061b] HashArrayMappedTries v0.2.0 [3e5b6fbb] HostCPUFeatures v0.1.17 [34004b35] HypergeometricFunctions v0.3.28 [7869d1d1] IRTools v0.4.15 [615f187c] IfElse v0.1.1 [313cdc1a] Indexing v1.1.1 [22cec73e] InitialValues v0.3.1 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [b3c1a2ee] IterationControl v0.5.4 [82899510] IteratorInterfaceExtensions v1.0.0 [033835bb] JLD2 v0.5.15 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [b14d175d] JuliaVariables v0.2.4 [63c18a36] KernelAbstractions v0.9.37 [b964fa9f] LaTeXStrings v1.4.0 [a5e1c1ea] LatinHypercubeSampling v1.9.0 [10f19ff3] LayoutPointers v0.1.17 [92ad9a40] LearnAPI v1.0.1 [d3d80556] LineSearches v7.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [e6f89c97] LoggingExtras v1.1.0 [bdcacae8] LoopVectorization v0.12.172 ⌅ [30fc2ffe] LossFunctions v0.11.2 [c2834f40] MLCore v1.0.0 ⌅ [64a0f543] MLFlowClient v0.5.1 [add582a8] MLJ v0.20.8 [45f359ea] MLJBalancing v0.1.5 [a7f614a8] MLJBase v1.8.1 [d354fa79] MLJClusteringInterface v0.1.13 [50ed68f4] MLJEnsembles v0.4.3 [7b7b8358] MLJFlow v0.5.0 [614be32b] MLJIteration v0.6.3 [e80e1ace] MLJModelInterface v1.11.1 [d491faf4] MLJModels v0.17.9 [03970b2e] MLJTuning 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[b3c3ace0] RangeArrays v0.3.2 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [05181044] RelocatableFolders v1.0.1 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [6038ab10] Rotations v1.7.1 [94e857df] SIMDTypes v0.1.0 [476501e8] SLEEFPirates v0.6.43 [321657f4] ScientificTypes v3.1.0 [30f210dd] ScientificTypesBase v3.0.0 [7e506255] ScopedValues v1.3.0 [6c6a2e73] Scratch v1.3.0 [efcf1570] Setfield v1.1.2 [605ecd9f] ShowCases v0.1.0 [777ac1f9] SimpleBufferStream v1.2.0 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.1 [03a91e81] SplitApplyCombine v1.2.3 [171d559e] SplittablesBase v0.1.15 [860ef19b] StableRNGs v1.0.3 [aedffcd0] Static v1.2.0 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [a19d573c] StatisticalMeasures v0.2.1 [c062fc1d] StatisticalMeasuresBase v0.1.2 [64bff920] StatisticalTraits v3.5.0 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 [4c63d2b9] StatsFuns v1.5.0 [88034a9c] StringDistances v0.11.3 [892a3eda] StringManipulation v0.4.1 [09ab397b] StructArrays v0.7.1 ⌅ [e5d66e97] TableDistances v0.2.1 [3783bdb8] TableTraits v1.0.1 ⌃ [0d432bfd] TableTransforms v1.21.0 [bd369af6] Tables v1.12.1 [8290d209] ThreadingUtilities v0.5.5 [3bb67fe8] TranscodingStreams v0.11.3 [28d57a85] Transducers v0.4.84 [28dd2a49] TransformsBase v1.6.0 [9d95f2ec] TypedTables v1.4.6 [5c2747f8] URIs v1.6.1 [3a884ed6] UnPack v1.0.2 [1986cc42] Unitful v1.23.1 [013be700] UnsafeAtomics v0.3.0 [3d5dd08c] VectorizationBase v0.21.71 [e88e6eb3] Zygote v0.7.10 [700de1a5] ZygoteRules v0.2.7 [c8ffd9c3] MbedTLS_jll v2.28.6+2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.13.0 [de0858da] Printf v1.11.0 [3fa0cd96] REPL v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2025.5.20 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.5.1+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.13.1+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Precompiling packages... 20531.2 ms ✓ TableDistances 12568.9 ms ? GeoStatsBase Info Given GeoClustering was explicitly requested, output will be shown live  WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 19939.1 ms ? GeoClustering 1 dependency successfully precompiled in 60 seconds. 196 already precompiled. 2 dependencies failed but may be precompilable after restarting julia 2 dependencies had output during precompilation: ┌ GeoClustering │ [Output was shown above] └ ┌ GeoStatsBase │ WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. │ WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. │ WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. │ WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. │ WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. │ WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. │ WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... Info Given GeoStatsBase was explicitly requested, output will be shown live  WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 12456.0 ms ? GeoStatsBase WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Imported binding TableTransforms.ColSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.Col was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.AllSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.NoneSpec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.colspec was undeclared at import time during import to GeoStatsBase. WARNING: Imported binding TableTransforms.choose was undeclared at import time during import to GeoStatsBase. WARNING: Method definition partitioninds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.PartitionMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:5 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:5. WARNING: Method definition sampleinds(Random.AbstractRNG, GeoTables.AbstractGeoTable, Meshes.DiscreteSamplingMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:8 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:8. WARNING: Method definition sortinds(GeoTables.AbstractGeoTable, Meshes.SortingMethod) in module GeoTables at /home/pkgeval/.julia/packages/GeoTables/pM3bS/src/indices.jl:11 overwritten in module GeoStatsBase at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geotables.jl:11. ERROR: LoadError: UndefVarError: `ColSpec` not defined in `GeoStatsBase` Suggestion: this global was defined as `TableTransforms.ColSpec` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/geoops/describe.jl:4 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [3] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/geoops.jl:6 [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [5] top-level scope @ ~/.julia/packages/GeoStatsBase/McgmE/src/GeoStatsBase.jl:54 [6] include(mod::Module, _path::String) @ Base ./Base.jl:305 [7] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2686 [8] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [9] macro expansion @ ./loading.jl:2389 [inlined] [10] macro expansion @ ./lock.jl:376 [inlined] [11] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [12] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [13] top-level scope @ ~/.julia/packages/GeoClustering/7vdqA/src/GeoClustering.jl:9 [14] include(mod::Module, _path::String) @ Base ./Base.jl:305 [15] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2686 [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2461 [17] macro expansion @ ./loading.jl:2389 [inlined] [18] macro expansion @ ./lock.jl:376 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2354 [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2330 [21] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:306 [22] top-level scope @ none:6 [23] eval(m::Module, e::Any) @ Core ./boot.jl:489 [24] exec_options(opts::Base.JLOptions) @ Base ./client.jl:287 [25] _start() @ Base ./client.jl:554 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geoops/describe.jl:4 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/geoops.jl:6 in expression starting at /home/pkgeval/.julia/packages/GeoStatsBase/McgmE/src/GeoStatsBase.jl:5 in expression starting at /home/pkgeval/.julia/packages/GeoClustering/7vdqA/src/GeoClustering.jl:5 in expression starting at /home/pkgeval/.julia/packages/GeoClustering/7vdqA/test/runtests.jl:1 Testing failed after 146.57s ERROR: LoadError: Package GeoClustering errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2458 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2313 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:511 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:305 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:321 [12] _start() @ Base ./client.jl:554 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 473.49s: illegal method overwrites during precompilation