Package evaluation of View5D on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T15:17:18.272 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.17s ################################################################################ # Installation # Installing View5D... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [90d841e0] + View5D v0.6.2 Updating `~/.julia/environments/v1.10/Manifest.toml` [39de3d68] + AxisArrays v0.4.7 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.16.0 [864edb3b] + DataStructures v0.18.22 [53c48c17] + FixedPointNumbers v0.8.5 [a09fc81d] + ImageCore v0.10.5 [8197267c] + IntervalSets v0.7.11 [c8e1da08] + IterTools v1.10.0 [494afd89] + JavaCall v0.8.0 [dbb5928d] + MappedArrays v0.4.2 [e94cdb99] + MosaicViews v0.3.4 [d3d30c82] + MutableShiftedArrays v0.2.0 [98581153] + NDTools v0.8.0 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.1 [5432bcbf] + PaddedViews v0.5.12 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [b3c3ace0] + RangeArrays v0.3.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [cae243ae] + StackViews v0.1.2 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [62fd8b95] + TensorCore v0.1.1 [1986cc42] + Unitful v1.22.1 [90d841e0] + View5D v0.6.2 ⌅ [1b915085] + WinReg v0.3.1 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 7.78s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 46.94s ################################################################################ # Testing # Testing View5D Status `/tmp/jl_29yTYE/Project.toml` [39de3d68] AxisArrays v0.4.7 [5ae59095] Colors v0.13.1 [a09fc81d] ImageCore v0.10.5 [494afd89] JavaCall v0.8.0 [98581153] NDTools v0.8.0 [90137ffa] StaticArrays v1.9.13 [1986cc42] Unitful v1.22.1 [90d841e0] View5D v0.6.2 [4af54fe1] LazyArtifacts [44cfe95a] Pkg v1.10.0 [9e88b42a] Serialization [8dfed614] Test Status `/tmp/jl_29yTYE/Manifest.toml` [39de3d68] AxisArrays v0.4.7 [3da002f7] ColorTypes v0.12.1 [c3611d14] ColorVectorSpace v0.11.0 [5ae59095] Colors v0.13.1 [34da2185] Compat v4.16.0 [864edb3b] DataStructures v0.18.22 [53c48c17] FixedPointNumbers v0.8.5 [a09fc81d] ImageCore v0.10.5 [8197267c] IntervalSets v0.7.11 [c8e1da08] IterTools v1.10.0 [494afd89] JavaCall v0.8.0 [dbb5928d] MappedArrays v0.4.2 [e94cdb99] MosaicViews v0.3.4 [d3d30c82] MutableShiftedArrays v0.2.0 [98581153] NDTools v0.8.0 [6fe1bfb0] OffsetArrays v1.17.0 [bac558e1] OrderedCollections v1.8.1 [5432bcbf] PaddedViews v0.5.12 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [b3c3ace0] RangeArrays v0.3.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [cae243ae] StackViews v0.1.2 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [62fd8b95] TensorCore v0.1.1 [1986cc42] Unitful v1.22.1 [90d841e0] View5D v0.6.2 ⌅ [1b915085] WinReg v0.3.1 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: JavaCall needs the environment variable `JULIA_COPY_STACKS` to be `1` or `yes`. │ Calling the JVM may result in undefined behavior. └ @ JavaCall ~/.julia/packages/JavaCall/IAoV2/src/JavaCall.jl:57 start viewers: Error During Test at /home/pkgeval/.julia/packages/View5D/agLcr/test/runtests.jl:9 Got exception outside of a @test JavaCall.JavaCallError("Cannot find java library libjvm.so\nSearch Path:\n /home/pkgeval/.julia/packages/View5D/agLcr/test") Stacktrace: [1] findjvm() @ JavaCall ~/.julia/packages/JavaCall/IAoV2/src/jvm.jl:108 [2] _init(opts::Vector{String}) @ JavaCall ~/.julia/packages/JavaCall/IAoV2/src/jvm.jl:291 [3] init() @ JavaCall ~/.julia/packages/JavaCall/IAoV2/src/jvm.jl:282 [4] view5d(data::Array{Float64, 5}, viewer::Nothing; gamma::Nothing, mode::DisplayMode, element::Int64, time::Int64, show_phase::Bool, keep_zero::Bool, name::String, title::Nothing, properties::Nothing) @ View5D ~/.julia/packages/View5D/agLcr/src/viewer_core.jl:1556 [5] view5d @ ~/.julia/packages/View5D/agLcr/src/viewer_core.jl:1515 [inlined] [6] #vv#46 @ ~/.julia/packages/View5D/agLcr/src/shorthands.jl:16 [inlined] [7] vv @ ~/.julia/packages/View5D/agLcr/src/shorthands.jl:15 [inlined] [8] display_array(arr::Array{Float64, 5}, name::String, disp::typeof(vv), viewer::Nothing) @ View5D ~/.julia/packages/View5D/agLcr/src/shorthands.jl:20 [9] macro expansion @ ~/.julia/packages/View5D/agLcr/src/shorthands.jl:177 [inlined] [10] macro expansion @ ~/.julia/packages/View5D/agLcr/test/runtests.jl:10 [inlined] [11] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [12] top-level scope @ ~/.julia/packages/View5D/agLcr/test/runtests.jl:10 [13] include(fname::String) @ Base.MainInclude ./client.jl:494 [14] top-level scope @ none:6 [15] eval @ ./boot.jl:385 [inlined] [16] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [17] _start() @ Base ./client.jl:557 Test Summary: | Error Total Time start viewers | 1 1 8.1s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/View5D/agLcr/test/runtests.jl:9 Testing failed after 23.11s ERROR: LoadError: Package View5D errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 96.65s: package tests unexpectedly errored