Package evaluation of StellarSpectraObservationFitting on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T21:38:40.373 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.17s ################################################################################ # Installation # Installing StellarSpectraObservationFitting... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [6b1189bd] + StellarSpectraObservationFitting v0.1.3 Updating `~/.julia/environments/v1.10/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs v1.5.0 [99985d1d] + AbstractGPs v0.5.24 [22286c92] + AccurateArithmetic v0.3.8 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [a9b6321e] + Atomix v1.1.1 [0e736298] + Bessels v0.2.8 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 ⌅ [0a1fb500] + BlockDiagonals v0.1.42 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [49dc2e85] + Calculus v0.5.2 [082447d4] + ChainRules v1.72.4 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 ⌅ [717857b8] + DSP v0.7.10 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have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 11.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 318.01s ################################################################################ # Testing # Testing StellarSpectraObservationFitting Status `/tmp/jl_jeMqJO/Project.toml` [99985d1d] AbstractGPs v0.5.24 ⌅ [717857b8] DSP v0.7.10 ⌅ [82cc6244] DataInterpolations v4.8.0 [31c24e10] Distributions v0.25.120 [20521544] ExpectationMaximizationPCA v0.2.0 [ec8451be] KernelFunctions v0.10.65 [d3d80556] LineSearches v7.3.0 ⌅ [0c723cd3] MKLSparse v1.1.0 [77ba4419] NaNMath v1.1.3 ⌅ [49c96f43] Nabla v0.12.4 [429524aa] Optim v1.12.0 ⌅ [2412ca09] ParameterHandling v0.4.10 ⌅ [f27b6e38] Polynomials v3.2.13 ⌅ [b0e4dd01] RollingFunctions v0.7.0 [d6dedbf8] SortFilters v0.1.0 ⌅ [276daf66] SpecialFunctions v1.8.8 [90137ffa] StaticArrays v1.9.13 [2913bbd2] StatsBase v0.34.5 [6b1189bd] StellarSpectraObservationFitting v0.1.3 ⌅ [e155a3c4] TemporalGPs v0.6.8 [1986cc42] Unitful v1.22.1 [6112ee07] UnitfulAstro v1.2.2 [37e2e46d] LinearAlgebra [2f01184e] SparseArrays v1.10.0 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[fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition rrule(Type{T}, Tuple) where {T<:(StaticArraysCore.SArray{S, T, N, L} where L where N where T where S<:Tuple)} in module StaticArraysChainRulesCoreExt at /home/pkgeval/.julia/packages/StaticArrays/LSPcF/ext/StaticArraysChainRulesCoreExt.jl:28 overwritten in module TemporalGPs at /home/pkgeval/.julia/packages/TemporalGPs/Zm1X9/src/util/chainrules.jl:31. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition rrule(Type{T}, Tuple) where {T<:(StaticArraysCore.SArray{S, T, N, L} where L where N where T where S<:Tuple)} in module StaticArraysChainRulesCoreExt at /home/pkgeval/.julia/packages/StaticArrays/LSPcF/ext/StaticArraysChainRulesCoreExt.jl:28 overwritten in module TemporalGPs at /home/pkgeval/.julia/packages/TemporalGPs/Zm1X9/src/util/chainrules.jl:31. ┌ Warning: the implicit keyword argument `filter_modules=(:Base, :SpecialFunctions, :NaNMath)` in `diffrules()` is deprecated and will be changed to `filter_modules=nothing` in an upcoming breaking release of DiffRules (i.e., `diffrules()` will return all rules defined in DiffRules) │ caller = top-level scope at scalar.jl:24 └ @ Core ~/.julia/packages/Nabla/ImpgG/src/sensitivities/scalar.jl:24 ┌ Warning: Module TemporalGPs with build ID ffffffff-ffff-ffff-0c78-89b3c37f54f8 is missing from the cache. │ This may mean TemporalGPs [e155a3c4-0841-43e1-8b83-a0e4f03cc18f] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2018 WARNING: method definition for calc_continuum_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:123 declares type variable T3 but does not use it. WARNING: method definition for calc_continuum_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:123 declares type variable T3 but does not use it. WARNING: method definition for calc_continuum_from_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:221 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:221 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_linear at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:227 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_linear at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:227 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_cubic at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:247 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_cubic at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:247 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_hybrid at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:255 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum_from_anchors_hybrid at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:255 declares type variable T4 but does not use it. WARNING: method definition for #find_clean_anchors_by_slope#278 at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:284 declares type variable AV3 but does not use it. WARNING: method definition for find_clean_anchors_by_slope at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:284 declares type variable T3 but does not use it. WARNING: method definition for find_clean_anchors_by_slope at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:284 declares type variable T3 but does not use it. WARNING: method definition for #merge_nearby_anchors#279 at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:299 declares type variable AV3 but does not use it. WARNING: method definition for merge_nearby_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:299 declares type variable T3 but does not use it. WARNING: method definition for merge_nearby_anchors at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:299 declares type variable T3 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:367 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:367 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:421 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:421 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:440 declares type variable T4 but does not use it. WARNING: method definition for calc_continuum at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/src/rassine.jl:440 declares type variable T4 but does not use it. Testing... fast GP prior likelihoods (and their gradients): Error During Test at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/test/runtests.jl:22 Got exception outside of a @test MethodError: no method matching var"#est_∇#1"(::Float64, ::Base.OneTo{Int64}, ::typeof(est_∇), ::var"#f#2"{StaticArraysCore.SMatrix{3, 3, Float64, 9}, StaticArraysCore.SMatrix{3, 3, Float64, 9}, Float64}, ::Vector{Float64}) Closest candidates are: var"#est_∇#1"(::Real, !Matched::UnitRange, ::typeof(est_∇), ::Function, ::Any) @ Main ~/.julia/packages/StellarSpectraObservationFitting/NJMga/test/runtests.jl:10 Stacktrace: [1] macro expansion @ ~/.julia/packages/StellarSpectraObservationFitting/NJMga/test/runtests.jl:39 [inlined] [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [3] top-level scope @ ~/.julia/packages/StellarSpectraObservationFitting/NJMga/test/runtests.jl:23 [4] include(fname::String) @ Base.MainInclude ./client.jl:494 [5] top-level scope @ none:6 [6] eval @ ./boot.jl:385 [inlined] [7] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [8] _start() @ Base ./client.jl:557 Test Summary: | Error Total Time fast GP prior likelihoods (and their gradients) | 1 1 14.4s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/StellarSpectraObservationFitting/NJMga/test/runtests.jl:22 Testing failed after 182.45s ERROR: LoadError: Package StellarSpectraObservationFitting errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 532.96s: illegal method overwrites during precompilation