Package evaluation of SBMLFBCModels on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T14:28:16.218


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 4.96s


################################################################################
# Installation
#

Installing SBMLFBCModels...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [3e8f9d1a] + SBMLFBCModels v1.1.0
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [5a4f3dfa] + AbstractFBCModels v1.3.0
  [ffbed154] + DocStringExtensions v0.9.4
  [615f187c] + IfElse v0.1.1
  [692b3bcd] + JLLWrappers v1.7.0
  [21216c6a] + Preferences v1.4.3
  [e5567a89] + SBML v1.6.0
  [3e8f9d1a] + SBMLFBCModels v1.1.0
  [1986cc42] + Unitful v1.22.1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [bb12108a] + SBML_jll v5.20.1+0
⌅ [02c8fc9c] + XML2_jll v2.13.6+1
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [b77e0a4c] + InteractiveUtils
  [b27032c2] + LibCURL v0.6.4
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [ca575930] + NetworkOptions v1.2.0
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [2f01184e] + SparseArrays v1.10.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 7.63s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 28.0s


################################################################################
# Testing
#

     Testing SBMLFBCModels
      Status `/tmp/jl_vf5Aa9/Project.toml`
  [5a4f3dfa] AbstractFBCModels v1.3.0
  [ffbed154] DocStringExtensions v0.9.4
  [e5567a89] SBML v1.6.0
  [3e8f9d1a] SBMLFBCModels v1.1.0
  [2f01184e] SparseArrays v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_vf5Aa9/Manifest.toml`
  [5a4f3dfa] AbstractFBCModels v1.3.0
  [ffbed154] DocStringExtensions v0.9.4
  [615f187c] IfElse v0.1.1
  [692b3bcd] JLLWrappers v1.7.0
  [21216c6a] Preferences v1.4.3
  [e5567a89] SBML v1.6.0
  [3e8f9d1a] SBMLFBCModels v1.1.0
  [1986cc42] Unitful v1.22.1
  [94ce4f54] Libiconv_jll v1.18.0+0
  [bb12108a] SBML_jll v5.20.1+0
⌅ [02c8fc9c] XML2_jll v2.13.6+1
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions v1.2.0
  [de0858da] Printf
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [2f01184e] SparseArrays v1.10.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
SBMLFBCModels tests: Error During Test at /home/pkgeval/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:8
  Got exception outside of a @test
  RequestError: Failed to connect to bigg.ucsd.edu port 80 after 30032 ms: Timeout was reached while requesting http://bigg.ucsd.edu/static/models/e_coli_core.xml
  Stacktrace:
    [1] (::Downloads.var"#9#19"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool})(easy::Downloads.Curl.Easy)
      @ Downloads /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:452
    [2] with_handle(f::Downloads.var"#9#19"{IOStream, Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, handle::Downloads.Curl.Easy)
      @ Downloads.Curl /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Curl/Curl.jl:105
    [3] #8
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:363 [inlined]
    [4] arg_write(f::Downloads.var"#8#18"{Base.DevNull, Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Bool, Nothing, String, Bool, Bool}, arg::IOStream)
      @ ArgTools /opt/julia/share/julia/stdlib/v1.10/ArgTools/src/ArgTools.jl:134
    [5] #7
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:362 [inlined]
    [6] arg_read
      @ /opt/julia/share/julia/stdlib/v1.10/ArgTools/src/ArgTools.jl:76 [inlined]
    [7] request(url::String; input::Nothing, output::IOStream, method::Nothing, headers::Vector{Pair{String, String}}, timeout::Float64, progress::Nothing, verbose::Bool, debug::Nothing, throw::Bool, downloader::Nothing, interrupt::Nothing)
      @ Downloads /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:361
    [8] request
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:328 [inlined]
    [9] #3
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:259 [inlined]
   [10] open(f::Downloads.var"#3#4"{Nothing, Vector{Pair{String, String}}, Float64, Nothing, Bool, Nothing, Nothing, String}, args::String; kwargs::@Kwargs{write::Bool, lock::Bool})
      @ Base ./io.jl:396
   [11] open_nolock
      @ /opt/julia/share/julia/stdlib/v1.10/ArgTools/src/ArgTools.jl:35 [inlined]
   [12] arg_write(f::Function, arg::String)
      @ ArgTools /opt/julia/share/julia/stdlib/v1.10/ArgTools/src/ArgTools.jl:103
   [13] #download#2
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:258 [inlined]
   [14] download
      @ /opt/julia/share/julia/stdlib/v1.10/Downloads/src/Downloads.jl:247 [inlined]
   [15] download_data_file(url::String, path::String, hash::String)
      @ AbstractFBCModels ~/.julia/packages/AbstractFBCModels/bQECn/src/utils.jl:128
   [16] macro expansion
      @ ~/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:35 [inlined]
   [17] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
   [18] top-level scope
      @ ~/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:9
   [19] include(fname::String)
      @ Base.MainInclude ./client.jl:494
   [20] top-level scope
      @ none:6
   [21] eval
      @ ./boot.jl:385 [inlined]
   [22] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:296
   [23] _start()
      @ Base ./client.jl:557
Test Summary:                        | Pass  Error  Total   Time
SBMLFBCModels tests                  |   33      1     34  33.0s
  Model type SBMLFBCModel properties |   33            33   0.2s
ERROR: LoadError: Some tests did not pass: 33 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/SBMLFBCModels/EZV7W/test/runtests.jl:8

Testing failed after 32.36s

ERROR: LoadError: Package SBMLFBCModels errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 110.79s: package tests unexpectedly errored