Package evaluation of HigherOrderNetworks on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T15:39:17.696


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.16s


################################################################################
# Installation
#

Installing HigherOrderNetworks...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [6f6a334d] + HigherOrderNetworks v0.1.0
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [d360d2e6] + ChainRulesCore v1.25.1
  [34da2185] + Compat v4.16.0
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [8bb1440f] + DelimitedFiles v1.9.1
⌅ [31c24e10] + Distributions v0.23.12
  [ffbed154] + DocStringExtensions v0.9.4
⌅ [1a297f60] + FillArrays v0.9.7
  [408c25d7] + GenericArpack v0.2.1
  [6f6a334d] + HigherOrderNetworks v0.1.0
  [3587e190] + InverseFunctions v0.1.17
⌅ [92d709cd] + IrrationalConstants v0.1.1
  [c8e1da08] + IterTools v1.10.0
  [692b3bcd] + JLLWrappers v1.7.0
  [8e2b3108] + KahanSummation v0.3.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [4f449596] + MatrixNetworks v1.0.4
  [e1d29d7a] + Missings v1.2.0
  [bac558e1] + OrderedCollections v1.8.1
⌅ [90014a1f] + PDMats v0.10.1
  [21216c6a] + Preferences v1.4.3
  [1fd47b50] + QuadGK v2.11.2
  [189a3867] + Reexport v1.2.2
⌅ [79098fc4] + Rmath v0.7.1
  [a2af1166] + SortingAlgorithms v1.2.1
⌅ [276daf66] + SpecialFunctions v0.10.3
⌅ [90137ffa] + StaticArrays v0.12.6
  [82ae8749] + StatsAPI v1.7.1
⌅ [2913bbd2] + StatsBase v0.33.21
⌅ [4c63d2b9] + StatsFuns v0.9.18
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
⌅ [f50d1b31] + Rmath_jll v0.4.3+0
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [b77e0a4c] + InteractiveUtils
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 8.28s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 15.84s


################################################################################
# Testing
#

     Testing HigherOrderNetworks
      Status `/tmp/jl_Bmst2u/Project.toml`
⌅ [31c24e10] Distributions v0.23.12
  [6f6a334d] HigherOrderNetworks v0.1.0
  [4f449596] MatrixNetworks v1.0.4
⌅ [276daf66] SpecialFunctions v0.10.3
⌅ [2913bbd2] StatsBase v0.33.21
  [37e2e46d] LinearAlgebra
  [9a3f8284] Random
  [2f01184e] SparseArrays v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_Bmst2u/Manifest.toml`
  [d360d2e6] ChainRulesCore v1.25.1
  [34da2185] Compat v4.16.0
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [8bb1440f] DelimitedFiles v1.9.1
⌅ [31c24e10] Distributions v0.23.12
  [ffbed154] DocStringExtensions v0.9.4
⌅ [1a297f60] FillArrays v0.9.7
  [408c25d7] GenericArpack v0.2.1
  [6f6a334d] HigherOrderNetworks v0.1.0
  [3587e190] InverseFunctions v0.1.17
⌅ [92d709cd] IrrationalConstants v0.1.1
  [c8e1da08] IterTools v1.10.0
  [692b3bcd] JLLWrappers v1.7.0
  [8e2b3108] KahanSummation v0.3.1
  [2ab3a3ac] LogExpFunctions v0.3.29
  [4f449596] MatrixNetworks v1.0.4
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.1
⌅ [90014a1f] PDMats v0.10.1
  [21216c6a] Preferences v1.4.3
  [1fd47b50] QuadGK v2.11.2
  [189a3867] Reexport v1.2.2
⌅ [79098fc4] Rmath v0.7.1
  [a2af1166] SortingAlgorithms v1.2.1
⌅ [276daf66] SpecialFunctions v0.10.3
⌅ [90137ffa] StaticArrays v0.12.6
  [82ae8749] StatsAPI v1.7.1
⌅ [2913bbd2] StatsBase v0.33.21
⌅ [4c63d2b9] StatsFuns v0.9.18
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
⌅ [f50d1b31] Rmath_jll v0.4.3+0
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [b77e0a4c] InteractiveUtils
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [de0858da] Printf
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] OpenBLAS_jll v0.3.23+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
WARNING: Method definition deg_distr(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:15 overwritten on the same line (check for duplicate calls to `include`).
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition deg_distr(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:15 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.deg_distr :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition nodes_by_deg(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:29 overwritten on the same line (check for duplicate calls to `include`).
WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(HigherOrderNetworks.nodes_by_deg), MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:29 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.nodes_by_deg :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition outweight_distr(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:44 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.outweight_distr :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition inweight_distr(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:68 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.inweight_distr :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition total_edge_weights(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:98 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.total_edge_weights :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition get_edges(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:121 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.get_edges :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition simplify(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:131 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.simplify :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition make_undirected(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:144 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.make_undirected :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: Method definition clustering(MatrixNetworks.MatrixNetwork{T} where T) in module HigherOrderNetworks at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Utilities.jl:158 overwritten on the same line (check for duplicate calls to `include`).
┌ Warning: Replacing docs for `HigherOrderNetworks.clustering :: Tuple{MatrixNetworks.MatrixNetwork}` in module `HigherOrderNetworks`
└ @ Base.Docs docs/Docs.jl:243
WARNING: method definition for kcliques at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/src/Cliques.jl:163 declares type variable T but does not use it.
ERROR: LoadError: SystemError: opening file "/home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/test/Clique_tests.jl": No such file or directory
Stacktrace:
  [1] systemerror(p::String, errno::Int32; extrainfo::Nothing)
    @ Base ./error.jl:176
  [2] systemerror
    @ ./error.jl:175 [inlined]
  [3] open(fname::String; lock::Bool, read::Nothing, write::Nothing, create::Nothing, truncate::Nothing, append::Nothing)
    @ Base ./iostream.jl:293
  [4] open
    @ ./iostream.jl:275 [inlined]
  [5] open(f::Base.var"#435#436"{String}, args::String; kwargs::@Kwargs{})
    @ Base ./io.jl:394
  [6] open
    @ ./io.jl:393 [inlined]
  [7] read
    @ ./io.jl:486 [inlined]
  [8] _include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./loading.jl:2202
  [9] include(fname::String)
    @ Base.MainInclude ./client.jl:494
 [10] top-level scope
    @ ~/.julia/packages/HigherOrderNetworks/oX55h/test/runtests.jl:7
 [11] include(fname::String)
    @ Base.MainInclude ./client.jl:494
 [12] top-level scope
    @ none:6
in expression starting at /home/pkgeval/.julia/packages/HigherOrderNetworks/oX55h/test/runtests.jl:7

Testing failed after 25.4s

ERROR: LoadError: Package HigherOrderNetworks errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 64.71s: illegal method overwrites during precompilation