Package evaluation of GraphMLDatasets on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T22:05:34.965 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 6.49s ################################################################################ # Installation # Installing GraphMLDatasets... Resolving package versions... Installed Conda ──── v1.10.2 Installed DataDeps ─ v0.7.8 Installed PyCall ─── v1.96.4 Updating `~/.julia/environments/v1.10/Project.toml` [21828b05] + GraphMLDatasets v0.1.7 Updating `~/.julia/environments/v1.10/Manifest.toml` [ec485272] + ArnoldiMethod v0.4.0 [ab4f0b2a] + BFloat16s v0.5.1 [b99e7846] + BinaryProvider v0.5.10 [e1450e63] + BufferedStreams v1.2.2 [336ed68f] + CSV v0.10.15 [944b1d66] + CodecZlib v0.7.8 [34da2185] + Compat v4.16.0 [8f4d0f93] + Conda v1.10.2 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [124859b0] + DataDeps v0.7.8 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌃ [5789e2e9] + FileIO v1.16.5 [48062228] + FilePathsBase v0.9.24 [21828b05] + GraphMLDatasets v0.1.7 [86223c79] + Graphs v1.13.0 [f67ccb44] + HDF5 v0.17.2 ⌅ [cd3eb016] + HTTP v0.9.17 [d25df0c9] + Inflate v0.1.5 [83e8ac13] + IniFile v0.5.1 [842dd82b] + InlineStrings v1.4.3 [7d512f48] + InternedStrings v0.7.0 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [b964fa9f] + LaTeXStrings v1.4.0 [23992714] + MAT v0.10.7 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.9 [e1d29d7a] + Missings v1.2.0 [15e1cf62] + NPZ v0.4.3 [bac558e1] + OrderedCollections v1.8.1 [65ce6f38] + PackageExtensionCompat v1.0.2 [69de0a69] + Parsers v2.8.3 [fbb45041] + Pickle v0.3.5 [2dfb63ee] + PooledArrays v1.4.3 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [438e738f] + PyCall v1.96.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [91c51154] + SentinelArrays v1.4.8 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 ⌅ [4db3bf67] + StridedViews v0.2.2 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.5.2 [81def892] + VersionParsing v1.3.0 [ea10d353] + WeakRefStrings v1.4.2 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [a5390f91] + ZipFile v0.9.4 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+2 [458c3c95] + OpenSSL_jll v3.5.0+0 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building Conda ───→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Building DataDeps → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/e299d8267135ef2f9c941a764006697082c1e7e8/build.log` Installation completed after 75.59s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 108.17s ################################################################################ # Testing # Testing GraphMLDatasets Status `/tmp/jl_GVmd17/Project.toml` [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 ⌃ [124859b0] DataDeps v0.7.8 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 ⌃ [5789e2e9] FileIO v1.16.5 [21828b05] GraphMLDatasets v0.1.7 [86223c79] Graphs v1.13.0 [f67ccb44] HDF5 v0.17.2 ⌅ [cd3eb016] HTTP v0.9.17 ⌅ [033835bb] JLD2 v0.4.54 [682c06a0] JSON v0.21.4 [23992714] MAT v0.10.7 [15e1cf62] NPZ v0.4.3 [fbb45041] Pickle v0.3.5 [438e738f] PyCall v1.96.4 ⌅ [a5390f91] ZipFile v0.9.4 [b77e0a4c] InteractiveUtils [2f01184e] SparseArrays v1.10.0 [8dfed614] Test Status `/tmp/jl_GVmd17/Manifest.toml` [ec485272] ArnoldiMethod v0.4.0 [ab4f0b2a] BFloat16s v0.5.1 [b99e7846] BinaryProvider v0.5.10 [e1450e63] BufferedStreams v1.2.2 [336ed68f] CSV v0.10.15 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.16.0 [8f4d0f93] Conda v1.10.2 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [124859b0] DataDeps v0.7.8 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [8bb1440f] DelimitedFiles v1.9.1 ⌃ [5789e2e9] FileIO v1.16.5 [48062228] FilePathsBase v0.9.24 [21828b05] GraphMLDatasets v0.1.7 [86223c79] Graphs v1.13.0 [f67ccb44] HDF5 v0.17.2 ⌅ [cd3eb016] HTTP v0.9.17 [d25df0c9] Inflate v0.1.5 [83e8ac13] IniFile v0.5.1 [842dd82b] InlineStrings v1.4.3 [7d512f48] InternedStrings v0.7.0 [41ab1584] InvertedIndices v1.3.1 [82899510] IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] JLD2 v0.4.54 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [23992714] MAT v0.10.7 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.16 [739be429] MbedTLS v1.1.9 [e1d29d7a] Missings v1.2.0 [15e1cf62] NPZ v0.4.3 [bac558e1] OrderedCollections v1.8.1 [65ce6f38] PackageExtensionCompat v1.0.2 [69de0a69] Parsers v2.8.3 [fbb45041] Pickle v0.3.5 [2dfb63ee] PooledArrays v1.4.3 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [438e738f] PyCall v1.96.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [699a6c99] SimpleTraits v0.9.4 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 ⌅ [4db3bf67] StridedViews v0.2.2 [69024149] StringEncodings v0.3.7 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.1 [3bb67fe8] TranscodingStreams v0.11.3 [5c2747f8] URIs v1.5.2 [81def892] VersionParsing v1.3.0 [ea10d353] WeakRefStrings v1.4.2 [76eceee3] WorkerUtilities v1.6.1 ⌅ [a5390f91] ZipFile v0.9.4 [0234f1f7] HDF5_jll v1.14.6+0 [e33a78d0] Hwloc_jll v2.12.1+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+2 [458c3c95] OpenSSL_jll v3.5.0+0 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [1a1011a3] SharedArrays [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... cora: Error During Test at /home/pkgeval/.julia/packages/GraphMLDatasets/nsi8O/test/cora.jl:1 Got exception outside of a @test IOError(EOFError() during request(https://github.com/abojchevski/graph2gauss/raw/master/data/cora.npz)) Stacktrace: [1] read_to_buffer(t::HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}, sizehint::Int64) @ HTTP.ConnectionPool ~/.julia/packages/HTTP/aTjcj/src/ConnectionPool.jl:275 [2] readuntil(t::HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}, f::Function, sizehint::Int64) @ HTTP.ConnectionPool ~/.julia/packages/HTTP/aTjcj/src/ConnectionPool.jl:294 [3] readuntil @ ~/.julia/packages/HTTP/aTjcj/src/ConnectionPool.jl:292 [inlined] [4] readheaders(io::HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}, message::HTTP.Messages.Response) @ HTTP.Messages ~/.julia/packages/HTTP/aTjcj/src/Messages.jl:537 [5] startread(http::HTTP.Streams.Stream{HTTP.Messages.Response, HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}}) @ HTTP.Streams ~/.julia/packages/HTTP/aTjcj/src/Streams.jl:170 [6] (::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"})(stream::HTTP.Streams.Stream{HTTP.Messages.Response, HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}}) @ HTTP ~/.julia/packages/HTTP/aTjcj/src/download.jl:111 [7] macro expansion @ ~/.julia/packages/HTTP/aTjcj/src/StreamRequest.jl:70 [inlined] [8] macro expansion @ ./task.jl:486 [inlined] [9] request(::Type{HTTP.StreamRequest.StreamLayer{Union{}}}, io::HTTP.ConnectionPool.Transaction{MbedTLS.SSLContext}, req::HTTP.Messages.Request, body::Nothing; reached_redirect_limit::Bool, response_stream::Nothing, iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}, verbose::Int64, kw::@Kwargs{}) @ HTTP.StreamRequest ~/.julia/packages/HTTP/aTjcj/src/StreamRequest.jl:57 [10] request(::Type{HTTP.ConnectionRequest.ConnectionPoolLayer{HTTP.StreamRequest.StreamLayer{Union{}}}}, url::URIs.URI, req::HTTP.Messages.Request, body::Nothing; proxy::Nothing, socket_type::Type, reuse_limit::Int64, kw::@Kwargs{iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}, reached_redirect_limit::Bool}) @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/aTjcj/src/ConnectionRequest.jl:108 [11] request(::Type{HTTP.ExceptionRequest.ExceptionLayer{HTTP.ConnectionRequest.ConnectionPoolLayer{HTTP.StreamRequest.StreamLayer{Union{}}}}}, ::URIs.URI, ::Vararg{Any}; kw::@Kwargs{iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}, reached_redirect_limit::Bool}) @ HTTP.ExceptionRequest ~/.julia/packages/HTTP/aTjcj/src/ExceptionRequest.jl:19 [12] (::Base.var"#96#98"{Base.var"#96#97#99"{ExponentialBackOff, HTTP.RetryRequest.var"#2#3"{Bool, HTTP.Messages.Request}, typeof(HTTP.request)}})(::Type, ::Vararg{Any}; kwargs::@Kwargs{iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}, reached_redirect_limit::Bool}) @ Base ./error.jl:308 [13] #96 @ ./error.jl:291 [inlined] [14] #request#1 @ ~/.julia/packages/HTTP/aTjcj/src/RetryRequest.jl:44 [inlined] [15] request(::Type{HTTP.MessageRequest.MessageLayer{HTTP.RetryRequest.RetryLayer{HTTP.ExceptionRequest.ExceptionLayer{HTTP.ConnectionRequest.ConnectionPoolLayer{HTTP.StreamRequest.StreamLayer{Union{}}}}}}}, method::String, url::URIs.URI, headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing; http_version::VersionNumber, target::String, parent::Nothing, iofunction::Function, kw::@Kwargs{reached_redirect_limit::Bool}) @ HTTP.MessageRequest ~/.julia/packages/HTTP/aTjcj/src/MessageRequest.jl:66 [16] request @ ~/.julia/packages/HTTP/aTjcj/src/MessageRequest.jl:29 [inlined] [17] request(::Type{HTTP.BasicAuthRequest.BasicAuthLayer{HTTP.MessageRequest.MessageLayer{HTTP.RetryRequest.RetryLayer{HTTP.ExceptionRequest.ExceptionLayer{HTTP.ConnectionRequest.ConnectionPoolLayer{HTTP.StreamRequest.StreamLayer{Union{}}}}}}}}, method::String, url::URIs.URI, headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing; kw::@Kwargs{reached_redirect_limit::Bool, iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}}) @ HTTP.BasicAuthRequest ~/.julia/packages/HTTP/aTjcj/src/BasicAuthRequest.jl:28 [18] request @ ~/.julia/packages/HTTP/aTjcj/src/BasicAuthRequest.jl:18 [inlined] [19] request(::Type{HTTP.RedirectRequest.RedirectLayer{HTTP.BasicAuthRequest.BasicAuthLayer{HTTP.MessageRequest.MessageLayer{HTTP.RetryRequest.RetryLayer{HTTP.ExceptionRequest.ExceptionLayer{HTTP.ConnectionRequest.ConnectionPoolLayer{HTTP.StreamRequest.StreamLayer{Union{}}}}}}}}}, method::String, url::URIs.URI, headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing; redirect_limit::Int64, forwardheaders::Bool, kw::@Kwargs{iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}}) @ HTTP.RedirectRequest ~/.julia/packages/HTTP/aTjcj/src/RedirectRequest.jl:28 [20] request @ ~/.julia/packages/HTTP/aTjcj/src/RedirectRequest.jl:18 [inlined] [21] #request#1 @ ~/.julia/packages/HTTP/aTjcj/src/TopRequest.jl:15 [inlined] [22] request(method::String, url::String, h::Vector{Pair{SubString{String}, SubString{String}}}, b::Nothing; headers::Vector{Pair{SubString{String}, SubString{String}}}, body::Nothing, query::Nothing, kw::@Kwargs{iofunction::HTTP.var"#29#35"{Float32, String, String, Vector{String}, HTTP.var"#format_bytes_per_second#34"{HTTP.var"#format_bytes#32"}, HTTP.var"#format_seconds#33", HTTP.var"#format_bytes#32", HTTP.var"#format_progress#31"}}) @ HTTP ~/.julia/packages/HTTP/aTjcj/src/HTTP.jl:330 [23] request @ ~/.julia/packages/HTTP/aTjcj/src/HTTP.jl:328 [inlined] [24] open @ ~/.julia/packages/HTTP/aTjcj/src/HTTP.jl:364 [inlined] [25] #download#28 @ ~/.julia/packages/HTTP/aTjcj/src/download.jl:110 [inlined] [26] download (repeats 2 times) @ ~/.julia/packages/HTTP/aTjcj/src/download.jl:100 [inlined] [27] fetch_http(remotepath::String, localdir::String; update_period::Float32) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/fetch_helpers.jl:80 [28] fetch_http @ ~/.julia/packages/DataDeps/jDkzU/src/fetch_helpers.jl:78 [inlined] [29] fetch_default(remotepath::String, localdir::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/fetch_helpers.jl:33 [30] run_fetch @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:99 [inlined] [31] download(datadep::DataDeps.DataDep{String, String, typeof(DataDeps.fetch_default), GraphMLDatasets.var"#preprocess#8"}, localdir::String; remotepath::String, i_accept_the_terms_of_use::Nothing, skip_checksum::Bool) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:78 [32] download @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:63 [inlined] [33] handle_missing @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:10 [inlined] [34] _resolve @ ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:83 [inlined] [35] resolve(datadep::DataDeps.DataDep{String, String, typeof(DataDeps.fetch_default), GraphMLDatasets.var"#preprocess#8"}, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:29 [36] resolve(datadep_name::String, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:54 [37] resolve @ ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:73 [inlined] [38] graphdata(::Cora) @ GraphMLDatasets ~/.julia/packages/GraphMLDatasets/nsi8O/src/interfaces.jl:176 [39] macro expansion @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/cora.jl:2 [inlined] [40] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [41] top-level scope @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/cora.jl:2 [42] include(fname::String) @ Base.MainInclude ./client.jl:494 [43] macro expansion @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/runtests.jl:21 [inlined] [44] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [45] top-level scope @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/runtests.jl:20 [46] include(fname::String) @ Base.MainInclude ./client.jl:494 [47] top-level scope @ none:6 [48] eval @ ./boot.jl:385 [inlined] [49] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [50] _start() @ Base ./client.jl:557 reddit: Error During Test at /home/pkgeval/.julia/packages/GraphMLDatasets/nsi8O/test/reddit.jl:1 Got exception outside of a @test SystemError: seek: Bad file descriptor Stacktrace: [1] systemerror(p::String, errno::Int32; extrainfo::Nothing) @ Base ./error.jl:176 [2] systemerror @ ./error.jl:175 [inlined] [3] seek(s::IOStream, n::Int64) @ Base ./iostream.jl:129 [4] read(f::ZipFile.ReadableFile, nb::Int64) @ ZipFile ~/.julia/packages/ZipFile/evaHP/src/ZipFile.jl:508 [5] read @ ~/.julia/packages/ZipFile/evaHP/src/ZipFile.jl:504 [inlined] [6] (::GraphMLDatasets.var"#preprocess#12")(local_path::String) @ GraphMLDatasets ~/.julia/packages/GraphMLDatasets/nsi8O/src/preprocess.jl:140 [7] #16 @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:122 [inlined] [8] cd(f::DataDeps.var"#16#17"{GraphMLDatasets.var"#preprocess#12", String}, dir::String) @ Base.Filesystem ./file.jl:112 [9] run_post_fetch(post_fetch_method::GraphMLDatasets.var"#preprocess#12", fetched_path::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:119 [10] download(datadep::DataDeps.DataDep{String, String, typeof(DataDeps.fetch_default), GraphMLDatasets.var"#preprocess#12"}, localdir::String; remotepath::String, i_accept_the_terms_of_use::Nothing, skip_checksum::Bool) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:84 [11] download @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:63 [inlined] [12] handle_missing @ ~/.julia/packages/DataDeps/jDkzU/src/resolution_automatic.jl:10 [inlined] [13] _resolve @ ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:83 [inlined] [14] resolve(datadep::DataDeps.DataDep{String, String, typeof(DataDeps.fetch_default), GraphMLDatasets.var"#preprocess#12"}, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:29 [15] resolve(datadep_name::String, inner_filepath::String, calling_filepath::String) @ DataDeps ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:54 [16] resolve @ ~/.julia/packages/DataDeps/jDkzU/src/resolution.jl:73 [inlined] [17] graphdata(::Reddit) @ GraphMLDatasets ~/.julia/packages/GraphMLDatasets/nsi8O/src/interfaces.jl:177 [18] macro expansion @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/reddit.jl:2 [inlined] [19] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [20] top-level scope @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/reddit.jl:2 [21] include(fname::String) @ Base.MainInclude ./client.jl:494 [22] macro expansion @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/runtests.jl:21 [inlined] [23] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [24] top-level scope @ ~/.julia/packages/GraphMLDatasets/nsi8O/test/runtests.jl:20 [25] include(fname::String) @ Base.MainInclude ./client.jl:494 [26] top-level scope @ none:6 [27] eval @ ./boot.jl:385 [inlined] [28] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [29] _start() @ Base ./client.jl:557 Archive: /home/pkgeval/.julia/packages/GraphMLDatasets/nsi8O/test/data/test.zip extracting: /home/pkgeval/.julia/packages/GraphMLDatasets/nsi8O/test/data/random.file Test Summary: | Pass Error Broken Total Time GraphMLDatasets.jl | 107 2 14 123 19m47.0s planetoid | 32 32 4m43.3s cora | 1 1 11.6s ppi | 21 21 2m47.4s reddit | 1 1 1m05.4s qm7b | 6 6 13.9s entities | None 0.0s ogb | 46 14 60 10m44.3s utils | 2 2 0.3s ERROR: LoadError: Some tests did not pass: 107 passed, 0 failed, 2 errored, 14 broken. in expression starting at /home/pkgeval/.julia/packages/GraphMLDatasets/nsi8O/test/runtests.jl:19 Testing failed after 1142.45s ERROR: LoadError: Package GraphMLDatasets errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1427.43s: package tests unexpectedly errored