Package evaluation of GaussianProcesses on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T19:10:25.556 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.54s ################################################################################ # Installation # Installing GaussianProcesses... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [891a1506] + GaussianProcesses v0.12.5 Updating `~/.julia/environments/v1.10/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.19.0 [d360d2e6] + ChainRulesCore v1.25.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 ⌅ [a0c0ee7d] + DifferentiationInterface v0.6.54 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.4 [fdbdab4c] + ElasticArrays v1.2.12 [2904ab23] + ElasticPDMats v0.2.3 [4e289a0a] + EnumX v1.0.5 ⌅ [442a2c76] + FastGaussQuadrature v0.4.9 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 ⌅ [f6369f11] + ForwardDiff v0.10.38 [891a1506] + GaussianProcesses v0.12.5 [3587e190] + InverseFunctions v0.1.17 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.9.1 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.12.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.4 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 ⌅ [79098fc4] + Rmath v0.7.1 [6e75b9c4] + ScikitLearnBase v0.5.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 ⌅ [4c63d2b9] + StatsFuns v0.9.18 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] + Rmath_jll v0.4.3+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [d6f4376e] + Markdown [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.91s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 81.71s ################################################################################ # Testing # Testing GaussianProcesses Status `/tmp/jl_xdoF7j/Project.toml` [49dc2e85] Calculus v0.5.2 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [fdbdab4c] ElasticArrays v1.2.12 [2904ab23] ElasticPDMats v0.2.3 ⌅ [442a2c76] FastGaussQuadrature v0.4.9 ⌅ [f6369f11] ForwardDiff v0.10.38 [891a1506] GaussianProcesses v0.12.5 [429524aa] Optim v1.12.0 [90014a1f] PDMats v0.11.35 [92933f4c] ProgressMeter v1.10.4 [3cdcf5f2] RecipesBase v1.3.4 [6e75b9c4] ScikitLearnBase v0.5.0 [276daf66] SpecialFunctions v2.5.1 [90137ffa] StaticArrays v1.9.13 ⌅ [4c63d2b9] StatsFuns v0.9.18 [37e2e46d] LinearAlgebra [de0858da] Printf [9a3f8284] Random [10745b16] Statistics v1.10.0 [8dfed614] Test Status `/tmp/jl_xdoF7j/Manifest.toml` [47edcb42] ADTypes v1.14.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.19.0 [49dc2e85] Calculus v0.5.2 [d360d2e6] ChainRulesCore v1.25.1 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 ⌅ [a0c0ee7d] DifferentiationInterface v0.6.54 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.120 [ffbed154] DocStringExtensions v0.9.4 [fdbdab4c] ElasticArrays v1.2.12 [2904ab23] ElasticPDMats v0.2.3 [4e289a0a] EnumX v1.0.5 ⌅ [442a2c76] FastGaussQuadrature v0.4.9 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 ⌅ [f6369f11] ForwardDiff v0.10.38 [891a1506] GaussianProcesses v0.12.5 [3587e190] InverseFunctions v0.1.17 ⌅ [92d709cd] IrrationalConstants v0.1.1 [692b3bcd] JLLWrappers v1.7.0 [d3d80556] LineSearches v7.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.9.1 [77ba4419] NaNMath v1.1.3 [429524aa] Optim v1.12.0 [bac558e1] OrderedCollections v1.8.1 [90014a1f] PDMats v0.11.35 [d96e819e] Parameters v0.12.3 [85a6dd25] PositiveFactorizations v0.2.4 ⌅ [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.4 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 ⌅ [79098fc4] Rmath v0.7.1 [6e75b9c4] ScikitLearnBase v0.5.0 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.1 [2913bbd2] StatsBase v0.34.5 ⌅ [4c63d2b9] StatsFuns v0.9.18 [3a884ed6] UnPack v1.0.2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 ⌅ [f50d1b31] Rmath_jll v0.4.3+0 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [9fa8497b] Future [b77e0a4c] InteractiveUtils [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [de0858da] Printf [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.5+0 [bea87d4a] SuiteSparse_jll v7.2.1+1 [8e850b90] libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time Utils | 1 1 4.7s 13.449394 seconds (2.89 M allocations: 198.748 MiB, 1.76% gc time, 55.85% compilation time) Test Summary: | Pass Total Time GP | 5 5 6.8s 7.201493 seconds (2.86 M allocations: 192.441 MiB, 1.99% gc time, 98.91% compilation time) Testing MeanZero... Testing MeanConst... Testing MeanLin... Testing MeanPoly... Testing MeanPeriodic... Observation #2: Test Failed at /home/pkgeval/.julia/packages/GaussianProcesses/dOato/test/means.jl:50 Expression: ≈(theor_grad, num_grad, rtol = 1.0e-5, atol = 1.0e-5) Evaluated: [-0.5918859580342372, 0.825170149281536, 0.9451568428395598, 0.7039301067840997, 0.8060217197333415, 0.5648842578216245, 0.3266168128458112, -0.7102692480763375, -3.2390075154258784, -0.18589393339392354, 8.91491064982429, -1.2232169894453528] ≈ [-0.5918859580315244, 0.8251701492819554, 0.9451568428371511, 0.7039064797536203, 0.8060217197310169, 0.5648842578363397, 0.3266168128373443, -0.7102926634683854, -3.239007515330688, -0.18589393341140056, 8.914910615225352, -1.2229730237433418] (rtol=1.0e-5, atol=1.0e-5) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:672 [inlined] [2] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:50 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] [4] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:43 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [6] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:43 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] [8] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:23 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [10] top-level scope @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:8 Observation #3: Test Failed at /home/pkgeval/.julia/packages/GaussianProcesses/dOato/test/means.jl:50 Expression: ≈(theor_grad, num_grad, rtol = 1.0e-5, atol = 1.0e-5) Evaluated: [0.7263014412077748, -0.7801941363167271, -0.4777187310256596, 0.842450139869483, 0.6873763281489327, 0.6255374566378868, -0.8785128422665394, -0.5387743143783753, -0.39191949050896724, -1.4681862968233073, -11.517506052131944, -2.8623272145147785] ≈ [0.7263014411898127, -0.7801941363186452, -0.4777187310120942, 0.8424314967004422, 0.6873763281430367, 0.6255374566157481, -0.8785128422760774, -0.5388034645051678, -0.39191949054847536, -1.4681862967058088, -11.517506033565834, -2.8620697807323676] (rtol=1.0e-5, atol=1.0e-5) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:672 [inlined] [2] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:50 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] [4] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:43 [inlined] [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [6] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:43 [inlined] [7] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] [8] macro expansion @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:23 [inlined] [9] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [10] top-level scope @ ~/.julia/packages/GaussianProcesses/dOato/test/means.jl:8 Testing ProdMean... Testing SumMean... Test Summary: | Pass Fail Total Time Means | 40 2 42 12.2s Mean GaussianProcesses.MeanZero | 6 6 2.1s Mean GaussianProcesses.MeanConst | 6 6 0.3s Mean GaussianProcesses.MeanLin | 6 6 1.5s Mean GaussianProcesses.MeanPoly | 6 6 0.7s Mean GaussianProcesses.MeanPeriodic | 4 2 6 5.1s Run | None 0.9s Consistency | 1 1 0.0s Gradients | 3 2 5 3.6s Observation #1 | 1 1 0.1s Observation #2 | 1 1 3.4s Observation #3 | 1 1 0.1s Observation #4 | 1 1 0.0s Observation #5 | 1 1 0.0s Mean GaussianProcesses.ProdMean{Tuple{GaussianProcesses.MeanConst, GaussianProcesses.MeanLin}} | 6 6 1.1s Mean GaussianProcesses.SumMean{Tuple{GaussianProcesses.MeanLin, GaussianProcesses.MeanPoly}} | 6 6 0.6s ERROR: LoadError: Some tests did not pass: 40 passed, 2 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/GaussianProcesses/dOato/test/means.jl:1 in expression starting at /home/pkgeval/.julia/packages/GaussianProcesses/dOato/test/runtests.jl:1 Testing failed after 41.59s ERROR: LoadError: Package GaussianProcesses errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 149.28s: package has test failures