Package evaluation of Decapodes on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T21:48:51.934


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.21s


################################################################################
# Installation
#

Installing Decapodes...
   Resolving package versions...
┌ Warning: tarball content does not match git-tree-sha1
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:660
     Cloning [227ef7b5-1206-438b-ac65-934d6da304b8] ACSets from https://github.com/AlgebraicJulia/ACSets.jl.git
   Installed ACSets ─ v0.2.24
    Updating `~/.julia/environments/v1.10/Project.toml`
  [679ab3ea] + Decapodes v0.6.2
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [227ef7b5] + ACSets v0.2.24
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.3.0
  [23cfdc9f] + AlgebraicInterfaces v0.1.4
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.19.0
  [4c555306] + ArrayLayouts v1.11.1
  [a9b6321e] + Atomix v1.1.1
  [e2ed5e7c] + Bijections v0.2.2
  [134e5e36] + Catlab v0.16.20
  [d360d2e6] + ChainRulesCore v1.25.1
⌅ [3da002f7] + ColorTypes v0.11.5
⌅ [5ae59095] + Colors v0.12.11
  [b1c52339] + CombinatorialSpaces v0.7.8
  [861a8166] + Combinatorics v1.0.3
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [0fb5dd42] + CompTime v0.1.2
  [34da2185] + Compat v4.16.0
  [b0b7db55] + ComponentArrays v0.15.27
  [a81c6b42] + Compose v0.9.6
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.5.8
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [679ab3ea] + Decapodes v0.6.2
  [6f00c28b] + DiagrammaticEquations v0.2.0
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.4
  [7c1d4256] + DynamicPolynomials v0.6.2
  [e2ba6199] + ExprTools v0.1.10
  [55351af7] + ExproniconLite v0.10.14
  [411431e0] + Extents v0.1.6
  [5789e2e9] + FileIO v1.17.0
  [1a297f60] + FillArrays v1.13.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [f6369f11] + ForwardDiff v1.0.1
  [d9f16b24] + Functors v0.5.2
⌅ [f0ffcf3b] + GATlab v0.1.5
  [6b9d7cbe] + GeneralizedGenerated v0.3.3
  [68eda718] + GeoFormatTypes v0.4.4
  [cf35fbd7] + GeoInterface v1.4.1
  [5c1252a2] + GeometryBasics v0.5.9
  [615f187c] + IfElse v0.1.1
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [0f8b85d8] + JSON3 v1.14.3
  [b14d175d] + JuliaVariables v0.2.4
  [63c18a36] + KernelAbstractions v0.9.34
  [ba0b0d4f] + Krylov v0.10.1
  [b964fa9f] + LaTeXStrings v1.4.0
  [5078a376] + LazyArrays v2.6.1
  [9c8b4983] + LightXML v0.9.1
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [d8e11817] + MLStyle v0.4.17
  [1914dd2f] + MacroTools v0.5.16
  [442fdcdd] + Measures v0.3.2
  [7269a6da] + MeshIO v0.5.3
  [e1d29d7a] + Missings v1.2.0
  [102ac46a] + MultivariatePolynomials v0.5.9
  [d8a4904e] + MutableArithmetics v1.6.4
  [77ba4419] + NaNMath v1.1.3
  [71a1bf82] + NameResolution v0.1.5
  [bac558e1] + OrderedCollections v1.8.1
  [12d937ae] + PEG v1.0.4
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.3
  [2ae35dd2] + Permutations v0.4.23
  [d236fae5] + PreallocationTools v0.4.27
⌅ [aea7be01] + PrecompileTools v1.2.1
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  [7e49a35a] + RuntimeGeneratedFunctions v0.5.15
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  [276daf66] + SpecialFunctions v2.5.1
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
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⌅ [02c8fc9c] + XML2_jll v2.13.6+1
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  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
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  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
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  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 12.23s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 1512.87s


################################################################################
# Testing
#

     Testing Decapodes
      Status `/tmp/jl_xi5ifC/Project.toml`
  [227ef7b5] ACSets v0.2.24
  [4c88cf16] Aqua v0.8.13
  [052768ef] CUDA v5.8.2
  [134e5e36] Catlab v0.16.20
  [b1c52339] CombinatorialSpaces v0.7.8
  [b0b7db55] ComponentArrays v0.15.27
  [679ab3ea] Decapodes v0.6.2
  [6f00c28b] DiagrammaticEquations v0.2.0
  [31c24e10] Distributions v0.25.120
  [5c1252a2] GeometryBasics v0.5.9
  [682c06a0] JSON v0.21.4
  [ba0b0d4f] Krylov v0.10.1
  [d8e11817] MLStyle v0.4.17
  [b1df2697] OrdinaryDiffEqTsit5 v1.1.0
  [d236fae5] PreallocationTools v0.4.27
  [37e2e46d] LinearAlgebra
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  [9a3f8284] Random
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_xi5ifC/Manifest.toml`
  [227ef7b5] ACSets v0.2.24
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  [134e5e36] Catlab v0.16.20
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  [fb6a15b2] CloseOpenIntervals v0.1.13
⌅ [3da002f7] ColorTypes v0.11.5
⌅ [5ae59095] Colors v0.12.11
  [b1c52339] CombinatorialSpaces v0.7.8
  [861a8166] Combinatorics v1.0.3
  [38540f10] CommonSolve v0.2.4
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⌅ [f0ffcf3b] GATlab v0.1.5
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  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Test Summary:                  | Pass  Total     Time
ComponentArrays.jl Integration |    2      2  4m42.7s
Test Summary:   | Pass  Total  Time
Simulation Core |  188    188  9.1s
Test Summary:  | Pass  Total  Time
Open Operators |   18     18  6.6s
WARNING: Method definition generate(Any, Any) in module Main at /home/pkgeval/.julia/packages/Decapodes/RRL4F/test/componentarrays.jl:25 overwritten at /home/pkgeval/.julia/packages/Decapodes/RRL4F/test/simulation.jl:55.
Test Summary: | Pass  Total     Time
Simulation    |   64     64  3m49.3s
[ Info: CUDA tests were not run.
┌ Error: Exception while generating log record in module Main at /home/pkgeval/.julia/packages/Decapodes/RRL4F/test/runtests.jl:26
│   exception =
│    CUDA driver not found
│    Stacktrace:
│     [1] error(s::String)
│       @ Base ./error.jl:35
│     [2] functional(show_reason::Bool)
│       @ CUDA ~/.julia/packages/CUDA/ja0IX/src/initialization.jl:24
│     [3] macro expansion
│       @ logging.jl:374 [inlined]
│     [4] top-level scope
│       @ ~/.julia/packages/Decapodes/RRL4F/test/runtests.jl:26
│     [5] include(fname::String)
│       @ Base.MainInclude ./client.jl:494
│     [6] top-level scope
│       @ none:6
│     [7] eval
│       @ ./boot.jl:385 [inlined]
│     [8] exec_options(opts::Base.JLOptions)
│       @ Base ./client.jl:296
│     [9] _start()
│       @ Base ./client.jl:557
└ @ Main ~/.julia/packages/Decapodes/RRL4F/test/runtests.jl:26
Test Summary:          | Pass  Total     Time
Code Quality (Aqua.jl) |   11     11  3m09.0s
     Testing Decapodes tests passed 

Testing completed after 791.35s

PkgEval succeeded after 2366.35s