Package evaluation of ClimaAtmos on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T23:24:54.689


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.3s


################################################################################
# Installation
#

Installing ClimaAtmos...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [b2c96348] + ClimaAtmos v0.30.2
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [47edcb42] + ADTypes v1.14.0
  [7d9f7c33] + Accessors v0.1.42
  [79e6a3ab] + Adapt v4.3.0
  [c7e460c6] + ArgParse v1.2.0
  [4fba245c] + ArrayInterface v7.19.0
  [4c555306] + ArrayLayouts v1.11.1
  [86bc3604] + AtmosphericProfilesLibrary v0.1.7
  [a9b6321e] + Atomix v1.1.1
  [13072b0f] + AxisAlgorithms v1.1.0
  [aae01518] + BandedMatrices v1.9.4
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [8e7c35d0] + BlockArrays v1.6.3
⌅ [179af706] + CFTime v0.1.4
  [2a0fbf3d] + CPUSummary v0.2.6
  [d360d2e6] + ChainRulesCore v1.25.1
  [b2c96348] + ClimaAtmos v0.30.2
  [3a4d1b5c] + ClimaComms v0.6.8
  [d414da3d] + ClimaCore v0.14.34
  [1ecacbb8] + ClimaDiagnostics v0.2.15
  [5c42b081] + ClimaParams v0.10.31
  [595c0a79] + ClimaTimeSteppers v0.8.5
  [b3f4f4ca] + ClimaUtilities v0.1.24
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [6a9e3e04] + CloudMicrophysics v0.22.13
  [3da002f7] + ColorTypes v0.12.1
  [5ae59095] + Colors v0.13.1
  [861a8166] + Combinatorics v1.0.3
  [1fbeeb36] + CommonDataModel v0.3.8
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [2569d6c7] + ConcreteStructs v0.2.3
  [187b0558] + ConstructionBase v1.5.8
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [7445602f] + CubedSphere v0.3.2
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [2b5f629d] + DiffEqBase v6.175.0
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [3c3547ce] + DiskArrays v0.4.13
  [ffbed154] + DocStringExtensions v0.9.4
  [4e289a0a] + EnumX v1.0.5
  [f151be2c] + EnzymeCore v0.8.11
  [e2ba6199] + ExprTools v0.1.10
  [55351af7] + ExproniconLite v0.10.14
  [7034ab61] + FastBroadcast v0.3.5
  [9aa1b823] + FastClosures v0.3.2
  [a4df4552] + FastPower v1.1.2
  [1a297f60] + FillArrays v1.13.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [f6369f11] + ForwardDiff v1.0.1
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
  [46192b85] + GPUArraysCore v0.2.0
  [d54b0c1a] + GaussQuadrature v0.5.8
  [88fa7841] + GilbertCurves v0.1.0
  [19dc6840] + HCubature v1.7.0
  [f67ccb44] + HDF5 v0.17.2
  [615f187c] + IfElse v0.1.1
  [e98cc03f] + Insolation v0.9.4
⌅ [a98d9a8b] + Interpolations v0.15.1
  [8197267c] + IntervalSets v0.7.11
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [ae98c720] + Jieko v0.2.1
  [63c18a36] + KernelAbstractions v0.9.34
  [ba0b0d4f] + Krylov v0.10.1
⌅ [0b1a1467] + KrylovKit v0.8.3
  [8ac3fa9e] + LRUCache v1.6.2
  [b964fa9f] + LaTeXStrings v1.4.0
  [10f19ff3] + LayoutPointers v0.1.17
  [9dccce8e] + LazyBroadcast v1.0.0
  [5c8ed15e] + LinearOperators v2.10.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.1.0
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.16
  [d125e4d3] + ManualMemory v0.1.8
  [2e0e35c7] + Moshi v0.3.5
  [46d2c3a1] + MuladdMacro v0.2.4
  [c3c07f87] + MultiBroadcastFusion v0.3.3
  [85f8d34a] + NCDatasets v0.14.8
  [5da4648a] + NVTX v1.0.0
  [77ba4419] + NaNMath v1.1.3
  [0d71be07] + NullBroadcasts v0.1.0
  [6fe1bfb0] + OffsetArrays v1.17.0
  [bac558e1] + OrderedCollections v1.8.1
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [d96e819e] + Parameters v0.12.3
  [eebad327] + PkgVersion v0.3.3
  [f517fe37] + Polyester v0.7.18
  [1d0040c9] + PolyesterWeave v0.2.2
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [1fd47b50] + QuadGK v2.11.2
  [a01a1ee8] + RRTMGP v0.21.3
  [c84ed2f1] + Ratios v0.4.5
  [3cdcf5f2] + RecipesBase v1.3.4
  [731186ca] + RecursiveArrayTools v3.33.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [7181ea78] + RootSolvers v0.4.4
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.15
  [94e857df] + SIMDTypes v0.1.0
  [0bca4576] + SciMLBase v2.97.0
  [c0aeaf25] + SciMLOperators v1.3.1
  [53ae85a6] + SciMLStructures v1.7.0
  [efcf1570] + Setfield v1.1.2
  [276daf66] + SpecialFunctions v2.5.1
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [7792a7ef] + StrideArraysCore v0.5.7
  [69024149] + StringEncodings v0.3.7
  [892a3eda] + StringManipulation v0.4.1
  [49b00bb7] + SurfaceFluxes v0.12.0
  [2efcf032] + SymbolicIndexingInterface v0.3.40
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
⌅ [6aa5eb33] + TaylorSeries v0.19.1
  [b718987f] + TextWrap v1.0.2
  [b60c26fb] + Thermodynamics v0.12.12
  [8290d209] + ThreadingUtilities v0.5.4
  [a759f4b9] + TimerOutputs v0.5.29
  [781d530d] + TruncatedStacktraces v1.4.0
  [3a884ed6] + UnPack v1.0.2
  [0fe1646c] + UnrolledUtilities v0.1.9
  [013be700] + UnsafeAtomics v0.3.0
⌅ [409d34a3] + VectorInterface v0.4.9
  [efce3f68] + WoodburyMatrices v1.0.0
  [ddb6d928] + YAML v0.4.14
  [0b7ba130] + Blosc_jll v1.21.7+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [0234f1f7] + HDF5_jll v1.14.6+0
  [e33a78d0] + Hwloc_jll v2.12.1+0
  [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [5ced341a] + Lz4_jll v1.10.1+0
  [7cb0a576] + MPICH_jll v4.3.0+1
  [f1f71cc9] + MPItrampoline_jll v5.5.3+0
  [9237b28f] + MicrosoftMPI_jll v10.1.4+3
  [e98f9f5b] + NVTX_jll v3.1.1+0
  [7243133f] + NetCDF_jll v401.900.300+0
  [fe0851c0] + OpenMPI_jll v5.0.7+2
  [458c3c95] + OpenSSL_jll v3.5.0+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
⌅ [02c8fc9c] + XML2_jll v2.13.6+1
  [ffd25f8a] + XZ_jll v5.8.1+0
  [3161d3a3] + Zstd_jll v1.5.7+1
  [477f73a3] + libaec_jll v1.1.3+0
  [337d8026] + libzip_jll v1.11.3+0
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [1a1011a3] + SharedArrays
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 16.41s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/iS95e/src/julia-1.9/activate_set.jl:63
Precompiling package dependencies...

Precompilation completed after 825.08s


################################################################################
# Testing
#

     Testing ClimaAtmos
┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1829
      Status `/tmp/jl_BKwSjG/Project.toml`
  [4c88cf16] Aqua v0.8.13
  [c7e460c6] ArgParse v1.2.0
  [a14bc488] ArtifactWrappers v0.2.0
  [86bc3604] AtmosphericProfilesLibrary v0.1.7
⌅ [13f3f980] CairoMakie v0.11.11
  [b2c96348] ClimaAtmos v0.30.2
  [3a4d1b5c] ClimaComms v0.6.8
  [d414da3d] ClimaCore v0.14.34
  [5c42b081] ClimaParams v0.10.31
  [e0c89595] ClimaReproducibilityTests v0.1.1
  [595c0a79] ClimaTimeSteppers v0.8.5
  [b3f4f4ca] ClimaUtilities v0.1.24
  [6a9e3e04] CloudMicrophysics v0.22.13
  [2b5f629d] DiffEqBase v6.175.0
  [31c24e10] Distributions v0.25.120
  [442a2c76] FastGaussQuadrature v1.0.2
  [e98cc03f] Insolation v0.9.4
⌅ [a98d9a8b] Interpolations v0.15.1
  [8197267c] IntervalSets v0.7.11
  [033835bb] JLD2 v0.5.13
  [682c06a0] JSON v0.21.4
  [ba0b0d4f] Krylov v0.10.1
  [9dccce8e] LazyBroadcast v1.0.0
  [85f8d34a] NCDatasets v0.14.8
  [5da4648a] NVTX v1.0.0
  [0d71be07] NullBroadcasts v0.1.0
  [bac558e1] OrderedCollections v1.8.1
  [08abe8d2] PrettyTables v2.4.0
  [a01a1ee8] RRTMGP v0.21.3
  [7181ea78] RootSolvers v0.4.4
  [1bc83da4] SafeTestsets v0.1.0
  [0bca4576] SciMLBase v2.97.0
  [90137ffa] StaticArrays v1.9.13
  [2913bbd2] StatsBase v0.34.5
  [49b00bb7] SurfaceFluxes v0.12.0
  [b60c26fb] Thermodynamics v0.12.12
  [ddb6d928] YAML v0.4.14
  [ade2ca70] Dates
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [9a3f8284] Random
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test
      Status `/tmp/jl_BKwSjG/Manifest.toml`
  [47edcb42] ADTypes v1.14.0
  [621f4979] AbstractFFTs v1.5.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.42
  [79e6a3ab] Adapt v4.3.0
  [35492f91] AdaptivePredicates v1.2.0
  [66dad0bd] AliasTables v1.1.3
  [27a7e980] Animations v0.4.2
  [4c88cf16] Aqua v0.8.13
  [c7e460c6] ArgParse v1.2.0
  [4fba245c] ArrayInterface v7.19.0
  [4c555306] ArrayLayouts v1.11.1
  [a14bc488] ArtifactWrappers v0.2.0
  [86bc3604] AtmosphericProfilesLibrary v0.1.7
  [a9b6321e] Atomix v1.1.1
  [67c07d97] Automa v1.1.0
  [13072b0f] AxisAlgorithms v1.1.0
  [39de3d68] AxisArrays v0.4.7
  [aae01518] BandedMatrices v1.9.4
  [18cc8868] BaseDirs v1.3.0
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [8e7c35d0] BlockArrays v1.6.3
  [fa961155] CEnum v0.5.0
⌅ [179af706] CFTime v0.1.4
  [2a0fbf3d] CPUSummary v0.2.6
  [96374032] CRlibm v1.0.2
  [159f3aea] Cairo v1.1.1
⌅ [13f3f980] CairoMakie v0.11.11
  [d360d2e6] ChainRulesCore v1.25.1
  [b2c96348] ClimaAtmos v0.30.2
  [3a4d1b5c] ClimaComms v0.6.8
  [d414da3d] ClimaCore v0.14.34
  [1ecacbb8] ClimaDiagnostics v0.2.15
  [5c42b081] ClimaParams v0.10.31
  [e0c89595] ClimaReproducibilityTests v0.1.1
  [595c0a79] ClimaTimeSteppers v0.8.5
  [b3f4f4ca] ClimaUtilities v0.1.24
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [6a9e3e04] CloudMicrophysics v0.22.13
  [a2cac450] ColorBrewer v0.4.1
  [35d6a980] ColorSchemes v3.29.0
⌅ [3da002f7] ColorTypes v0.11.5
⌃ [c3611d14] ColorVectorSpace v0.10.0
⌅ [5ae59095] Colors v0.12.11
  [861a8166] Combinatorics v1.0.3
  [1fbeeb36] CommonDataModel v0.3.8
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.8
  [d38c429a] Contour v0.6.3
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [7445602f] CubedSphere v0.3.2
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [927a84f5] DelaunayTriangulation v1.6.4
  [8bb1440f] DelimitedFiles v1.9.1
  [2b5f629d] DiffEqBase v6.175.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [3c3547ce] DiskArrays v0.4.13
  [31c24e10] Distributions v0.25.120
  [ffbed154] DocStringExtensions v0.9.4
  [4e289a0a] EnumX v1.0.5
  [f151be2c] EnzymeCore v0.8.11
  [429591f6] ExactPredicates v2.2.8
  [e2ba6199] ExprTools v0.1.10
  [55351af7] ExproniconLite v0.10.14
  [411431e0] Extents v0.1.6
  [7a1cc6ca] FFTW v1.9.0
  [7034ab61] FastBroadcast v0.3.5
  [9aa1b823] FastClosures v0.3.2
  [442a2c76] FastGaussQuadrature v1.0.2
  [a4df4552] FastPower v1.1.2
  [5789e2e9] FileIO v1.17.0
⌅ [8fc22ac5] FilePaths v0.8.3
  [48062228] FilePathsBase v0.9.24
  [1a297f60] FillArrays v1.13.0
  [53c48c17] FixedPointNumbers v0.8.5
  [1fa38f19] Format v1.3.7
  [f6369f11] ForwardDiff v1.0.1
  [b38be410] FreeType v4.1.1
  [663a7486] FreeTypeAbstraction v0.10.7
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
  [46192b85] GPUArraysCore v0.2.0
  [d54b0c1a] GaussQuadrature v0.5.8
  [68eda718] GeoFormatTypes v0.4.4
  [cf35fbd7] GeoInterface v1.4.1
⌅ [5c1252a2] GeometryBasics v0.4.11
  [88fa7841] GilbertCurves v0.1.0
  [a2bd30eb] Graphics v1.1.3
⌅ [3955a311] GridLayoutBase v0.10.2
  [42e2da0e] Grisu v1.0.2
  [19dc6840] HCubature v1.7.0
  [f67ccb44] HDF5 v0.17.2
  [34004b35] HypergeometricFunctions v0.3.28
  [615f187c] IfElse v0.1.1
  [2803e5a7] ImageAxes v0.6.12
  [c817782e] ImageBase v0.1.7
  [a09fc81d] ImageCore v0.10.5
  [82e4d734] ImageIO v0.6.9
  [bc367c6b] ImageMetadata v0.9.10
  [9b13fd28] IndirectArrays v1.0.0
  [d25df0c9] Inflate v0.1.5
  [e98cc03f] Insolation v0.9.4
⌅ [a98d9a8b] Interpolations v0.15.1
  [d1acc4aa] IntervalArithmetic v0.22.35
  [8197267c] IntervalSets v0.7.11
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.4
  [f1662d9f] Isoband v0.1.1
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [033835bb] JLD2 v0.5.13
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [ae98c720] Jieko v0.2.1
  [b835a17e] JpegTurbo v0.1.6
  [63c18a36] KernelAbstractions v0.9.34
  [5ab0869b] KernelDensity v0.6.9
  [ba0b0d4f] Krylov v0.10.1
⌅ [0b1a1467] KrylovKit v0.8.3
  [8ac3fa9e] LRUCache v1.6.2
  [b964fa9f] LaTeXStrings v1.4.0
  [10f19ff3] LayoutPointers v0.1.17
  [9dccce8e] LazyBroadcast v1.0.0
  [8cdb02fc] LazyModules v0.3.1
  [5c8ed15e] LinearOperators v2.10.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [e6f89c97] LoggingExtras v1.1.0
  [3da0fdf6] MPIPreferences v0.1.11
  [1914dd2f] MacroTools v0.5.16
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        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
[ Info: Era global dataset path:`/home/pkgeval/.julia/artifacts/2e591f64c1eda58b0326c88e179a023c17f314fb`
[ Info: Era single column dataset path:`/home/pkgeval/.julia/artifacts/3c60094bbd2bf81acf2822eca78bafd58e3f5a60`
[ Info: topo dataset path:`/home/pkgeval/.julia/artifacts/9970989c13c2ad015ab5738d42fd9f5b320f1451`
[ Info: MiMA convective gravity wave path:`/home/pkgeval/.julia/artifacts/a0dee8def6651bb1a2b394ec22802ba009281dbd`
[ Info: GFDL OGWD test data:`/home/pkgeval/.julia/artifacts/c09da6f2776dad389289a1c69c8e0ae77ddf7c96`
366.329563 seconds (15.80 M allocations: 1.381 GiB, 0.77% gc time, 6.92% compilation time: <1% of which was recompilation)
Test Summary: | Pass  Total     Time
Aqua          |   13     13  6m06.4s
  0.955837 seconds (277.56 k allocations: 23.076 MiB, 90.13% compilation time)
Test Summary: | Pass  Total  Time
Dependencies  |    1      1  1.0s
  2.972802 seconds (1.07 M allocations: 73.931 MiB, 98.02% compilation time)
Test Summary: | Pass  Total  Time
Callbacks     |   13     13  3.0s
┌ Warning: `FaceFiniteDifferenceSpace(mesh::IntervalMesh)` is deprecated, use `FiniteDifferenceSpace(FiniteDifferenceGrid(ClimaComms.device(), mesh), CellFace())` instead.
│   caller = ip:0x0
└ @ Core :-1
[ Info: Using default configuration
┌ Warning: `job_id` is empty and likely not passed to AtmosConfig
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/types.jl:771
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: z heights
│   z_mesh.faces =
│    11-element LinRange{ClimaCore.Geometry.ZPoint{Float32}, Int64}:
└     ZPoint(0.0), ZPoint(0.314159), …, ZPoint(2.82743), ZPoint(3.14159)
[ Info: No surface orography warp applied
190.360761 seconds (139.05 M allocations: 8.336 GiB, 3.40% gc time, 90.79% compilation time: <1% of which was recompilation)
Test Summary: | Pass  Total     Time
Utilities     |   75     75  3m10.4s
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
 21.252503 seconds (21.15 M allocations: 844.610 MiB, 1.71% gc time, 88.66% compilation time)
Test Summary:   | Pass  Total   Time
Parameter tests |   38     38  21.3s
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.DryModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`Nothing`
│                       `radiation_mode`::`Nothing`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "coupler_compatibility1"
└   output_dir = "coupler_compatibility1"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 6.975 s (2131897 allocations: 153.29 MiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 60.295 s (36245880 allocations: 2.0 GiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 3.202 s (1251849 allocations: 76.97 MiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 703.337 ms (259707 allocations: 18.32 MiB)
┌ Warning: The keyword argument `reference_date` is deprecated. Use `start_date` instead.
│   caller = (::ClimaAtmos.Diagnostics.var"#91#92"{…})(short_name::String) at default_diagnostics.jl:85
└ @ ClimaAtmos.Diagnostics ~/.julia/packages/ClimaAtmos/ciLMs/src/diagnostics/default_diagnostics.jl:85
┌ Warning: The keyword argument `reference_date` is deprecated. Use `start_date` instead.
│   caller = (::ClimaAtmos.Diagnostics.var"#91#92"{…})(short_name::String) at default_diagnostics.jl:85
└ @ ClimaAtmos.Diagnostics ~/.julia/packages/ClimaAtmos/ciLMs/src/diagnostics/default_diagnostics.jl:85
┌ Warning: The keyword argument `reference_date` is deprecated. Use `start_date` instead.
│   caller = (::ClimaAtmos.Diagnostics.var"#91#92"{…})(short_name::String) at default_diagnostics.jl:85
└ @ ClimaAtmos.Diagnostics ~/.julia/packages/ClimaAtmos/ciLMs/src/diagnostics/default_diagnostics.jl:85
[ Info: Saving accumulated diagnostics to disk with frequency: 1 day
[ Info: DictWriter: String[]
[ Info: HDF5Writer: String[]
[ Info: NetCDFWriter: ["orog_inst", "ts_1d_average", "ta_1d_average", "tas_1d_average", "uas_1d_average", "vas_1d_average", "thetaa_1d_average", "ha_1d_average", "pfull_1d_average", "zg_1d_average", "rhoa_1d_average", "ua_1d_average", "va_1d_average", "wa_1d_average", "hfes_1d_average", "ts_1d_min", "ts_1d_max"]
[ Info: initializing diagnostics: 17.888 s (11664351 allocations: 805.66 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 22.059 ms (408 allocations: 29.27 KiB)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 1.431 s (350513 allocations: 27.7 MiB)
[ Info: init integrator: 24.282 s (11051574 allocations: 705.81 MiB)
[ Info: Added diagnostics: 42.884 s (15532834 allocations: 966.29 MiB)
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.DryModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`Nothing`
│                       `radiation_mode`::`Nothing`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "coupler_compatibility2"
└   output_dir = "coupler_compatibility2/output_0000"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 55.315 ms (22 allocations: 695.81 KiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 6.289 s (4842584 allocations: 316.57 MiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 328.707 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 271.06 ms (105485 allocations: 7.56 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 1 day
[ Info: DictWriter: String[]
[ Info: HDF5Writer: String[]
[ Info: NetCDFWriter: ["orog_inst", "ts_1d_average", "ta_1d_average", "tas_1d_average", "uas_1d_average", "vas_1d_average", "thetaa_1d_average", "ha_1d_average", "pfull_1d_average", "zg_1d_average", "rhoa_1d_average", "ua_1d_average", "va_1d_average", "wa_1d_average", "hfes_1d_average", "ts_1d_min", "ts_1d_max"]
[ Info: initializing diagnostics: 701.613 ms (57982 allocations: 5.68 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 9.92 μs (1 allocations: 272 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 391.516 μs (160 allocations: 5.34 MiB)
[ Info: init integrator: 7.664 s (822705 allocations: 69.79 MiB)
[ Info: Added diagnostics: 2.473 s (599188 allocations: 46.88 MiB)
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "1secs"
│   t_end = "10days"
└   floor_n_steps = 1439
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.EquilMoistModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`ClimaAtmos.FixedCO2{Float64}`
│                       `radiation_mode`::`ClimaAtmos.RRTMGPInterface.ClearSkyRadiation`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`ClimaAtmos.DiagnosticEDMFX{1, false, Float32}`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "coupler_compatibility3"
└   output_dir = "coupler_compatibility3/output_0000"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 4.067 s (1371210 allocations: 98.68 MiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 153.057 s (128752380 allocations: 7.12 GiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 660.653 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 491.509 ms (132836 allocations: 9.57 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 690.79 ms (106627 allocations: 8.73 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 37.637 ms (408 allocations: 29.36 KiB)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18, 36]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 13.047 s (4781051 allocations: 324.94 MiB)
[ Info: init integrator: 88.337 s (52704161 allocations: 3.09 GiB)
[ Info: Added diagnostics: 2.949 s (108321 allocations: 7.53 MiB)
584.320509 seconds (361.62 M allocations: 21.276 GiB, 2.80% gc time, 98.14% compilation time: <1% of which was recompilation)
Test Summary:         | Pass  Total     Time
Coupler Compatibility |    5      5  9m44.3s
┌ Warning: `job_id` is empty and likely not passed to AtmosConfig
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/types.jl:771
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
┌ Info: Making AtmosConfig with config files: 
│    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/config/model_configs/baroclinic_wave.yml
  3.973444 seconds (1.17 M allocations: 86.810 MiB, 81.50% compilation time)
Test Summary:       | Pass  Total  Time
Configuration tests |    7      7  4.0s
[ Info: Using default configuration
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
┌ Warning: co2_model set to nothing with an RRTMGP model. Resetting to FixedCO2
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:44
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.DryModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`ClimaAtmos.FixedCO2{Float64}`
│                       `radiation_mode`::`ClimaAtmos.RRTMGPInterface.ClearSkyRadiation`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "surface_albedo1"
└   output_dir = "surface_albedo1/output_0000"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 3.733 s (1096243 allocations: 79.85 MiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 18.932 s (10247626 allocations: 694.04 MiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 503.095 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 398.862 ms (123846 allocations: 8.96 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 363.142 ms (60056 allocations: 5.64 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 5.98 μs (1 allocations: 368 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18, 36]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 126.809 ms (55233 allocations: 8.96 MiB)
[ Info: init integrator: 34.683 s (3991391 allocations: 285.77 MiB)
[ Info: Added diagnostics: 2.604 s (71808 allocations: 4.96 MiB)
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
┌ Warning: co2_model set to nothing with an RRTMGP model. Resetting to FixedCO2
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:44
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.DryModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`ClimaAtmos.FixedCO2{Float64}`
│                       `radiation_mode`::`ClimaAtmos.RRTMGPInterface.ClearSkyRadiation`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.RegressionFunctionAlbedo{Float32, ClimaAtmos.var"#158#160"{Float32}}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "surface_albedo1"
└   output_dir = "surface_albedo1/output_0001"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 3.896 s (1096238 allocations: 79.79 MiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 18.152 s (10183556 allocations: 689.74 MiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 253.488 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 363.742 ms (123852 allocations: 8.97 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 314.214 ms (60059 allocations: 5.64 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 5.48 μs (1 allocations: 368 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18, 36]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 128.905 ms (55239 allocations: 8.96 MiB)
[ Info: init integrator: 42.036 s (8973852 allocations: 529.17 MiB)
[ Info: Added diagnostics: 2.559 s (70105 allocations: 4.85 MiB)
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
┌ Warning: co2_model set to nothing with an RRTMGP model. Resetting to FixedCO2
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:44
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.DryModel`
│                         `precip_model`::`ClimaAtmos.NoPrecipitation`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`ClimaAtmos.FixedCO2{Float64}`
│                       `radiation_mode`::`ClimaAtmos.RRTMGPInterface.ClearSkyRadiation`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.CouplerAlbedo`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "surface_albedo1"
└   output_dir = "surface_albedo1/output_0002"
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 4
│   h_elem = 6
│   z_elem = 10
│   ncols = 3456
└   ndofs_total = 34560
[ Info: Allocating Y: 4.081 s (1096239 allocations: 79.79 MiB)
[ Info: using deep atmosphere
[ Info: Allocating cache (p): 16.9 s (10183558 allocations: 689.74 MiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 340.247 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 384.547 ms (123845 allocations: 8.96 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 333.097 ms (60060 allocations: 5.64 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 9.68 μs (1 allocations: 368 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18, 36]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 128.364 ms (55233 allocations: 8.96 MiB)
┌ Warning: Setting surface albedo to 0.38 at the beginning of the simulation
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/cache/surface_albedo.jl:119
[ Info: init integrator: 32.679 s (3436496 allocations: 249.08 MiB)
[ Info: Added diagnostics: 2.438 s (70105 allocations: 4.85 MiB)
┌ Warning: Setting surface albedo to 0.38 at the beginning of the simulation
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/cache/surface_albedo.jl:119
212.510872 seconds (56.27 M allocations: 3.664 GiB, 1.47% gc time, 88.29% compilation time)
Test Summary:        | Pass  Total     Time
surface albedo tests |   17     17  3m32.5s
 20.259832 seconds (6.53 M allocations: 415.084 MiB, 12.02% gc time, 98.84% compilation time)
Test Summary:             | Pass  Total   Time
Radiation interface tests |   40     40  20.3s
 23.184713 seconds (15.15 M allocations: 1022.834 MiB, 1.97% gc time, 97.91% compilation time)
Test Summary:          | Pass  Total   Time
Sponge interface tests |    3      3  23.2s
  1.555985 seconds (721.47 k allocations: 50.747 MiB, 98.36% compilation time)
Test Summary:          | Pass  Total  Time
Sponge interface tests |    1      1  1.6s
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.EquilMoistModel`
│                         `precip_model`::`ClimaAtmos.Microphysics0Moment`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`Nothing`
│                       `radiation_mode`::`Nothing`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "equil_0M"
└   output_dir = "equil_0M/output_0000"
┌ Warning: perturb_initstate flag is ignored for single column configuration
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:214
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 1
│   h_elem = 6
│   z_elem = 10
│   ncols = 1
└   ndofs_total = 10
[ Info: Allocating Y: 11.178 s (5815379 allocations: 379.82 MiB)
[ Info: Allocating cache (p): 71.837 s (36031632 allocations: 1.96 GiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 523.394 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 287.502 ms (105491 allocations: 7.56 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 9.041 s (2419623 allocations: 164.03 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 10.71 μs (1 allocations: 272 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18]
[ Info: n_steps_per_cycle (non diagnostics): 9216
[ Info: Define ode function: 9.447 s (3601840 allocations: 236.93 MiB)
[ Info: init integrator: 23.803 s (11629646 allocations: 711.58 MiB)
[ Info: Added diagnostics: 1.763 s (71791 allocations: 4.96 MiB)
┌ Info: Making AtmosConfig with config files: 
└    /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/../../config/default_configs/default_config.yml
[ Info: Running on CPUSingleThreaded
[ Info: Setting up single-process ClimaAtmos run
┌ Info: Time info:
│   dt = "600secs"
│   t_start = "0secs"
│   t_end = "10days"
└   floor_n_steps = 1440
[ Info: Using CAM_SE hyperdiffusion. vorticity_hyperdiffusion_coefficient, scalar_hyperdiffusion_coefficient and divergence_damping_factor in the config will be ignored.
┌ Info: numerics 
│            `energy_upwinding`::`Val{:vanleer_limiter}`
│            `tracer_upwinding`::`Val{:vanleer_limiter}`
│             `edmfx_upwinding`::`Val{:none}`
│     `edmfx_sgsflux_upwinding`::`Val{:none}`
│     `test_dycore_consistency`::`Nothing`
└                     `limiter`::`Nothing`
┌ Info: AtmosModel: 
│ 
│                       `moisture_model`::`ClimaAtmos.NonEquilMoistModel`
│                         `precip_model`::`ClimaAtmos.Microphysics1Moment`
│                          `cloud_model`::`ClimaAtmos.QuadratureCloud{ClimaAtmos.SGSQuadrature{3, StaticArraysCore.SVector{3, Float32}, StaticArraysCore.SVector{3, Float32}}}`
│           `noneq_cloud_formation_mode`::`ClimaAtmos.Explicit`
│     `call_cloud_diagnostics_per_stage`::`Nothing`
│                         `forcing_type`::`Nothing`
│                           `subsidence`::`Nothing`
│                                `ozone`::`ClimaAtmos.IdealizedOzone`
│                                  `co2`::`Nothing`
│                       `radiation_mode`::`Nothing`
│                               `ls_adv`::`Nothing`
│                     `external_forcing`::`Nothing`
│                        `edmf_coriolis`::`Nothing`
│                          `edmfx_model`::`ClimaAtmos.EDMFXModel{ClimaAtmos.NoEntrainment, ClimaAtmos.NoDetrainment, Val{false}, Val{false}, Val{false}, Val{false}, ClimaAtmos.SmoothMinimumBlending}`
│                       `turbconv_model`::`Nothing`
│          `non_orographic_gravity_wave`::`Nothing`
│              `orographic_gravity_wave`::`Nothing`
│                            `hyperdiff`::`ClimaAtmos.ClimaHyperdiffusion{Float32}`
│                            `vert_diff`::`Nothing`
│                            `diff_mode`::`ClimaAtmos.Explicit`
│                         `sgs_adv_mode`::`ClimaAtmos.Explicit`
│                   `sgs_entr_detr_mode`::`ClimaAtmos.Explicit`
│                 `sgs_nh_pressure_mode`::`ClimaAtmos.Explicit`
│                          `sgs_mf_mode`::`ClimaAtmos.Explicit`
│                       `viscous_sponge`::`Nothing`
│                    `smagorinsky_lilly`::`Nothing`
│                      `rayleigh_sponge`::`Nothing`
│                      `sfc_temperature`::`ClimaAtmos.ZonallySymmetricSST`
│                           `insolation`::`ClimaAtmos.IdealizedInsolation`
│                        `surface_model`::`ClimaAtmos.PrescribedSurfaceTemperature`
│                       `surface_albedo`::`ClimaAtmos.ConstantAlbedo{Float32}`
└                             `numerics`::`ClimaAtmos.AtmosNumerics{Val{:vanleer_limiter}, Val{:vanleer_limiter}, Val{:none}, Val{:none}, Nothing, Nothing}`
┌ Info: Simulation info
│   job_id = "precipitation_1M"
└   output_dir = "precipitation_1M/output_0000"
┌ Warning: perturb_initstate flag is ignored for single column configuration
└ @ ClimaAtmos ~/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:214
┌ Info: z heights
│   z_mesh.faces =
│    11-element Vector{ClimaCore.Geometry.ZPoint{Float32}}:
│     ZPoint(0.0)
│     ZPoint(500.0)
│     ZPoint(1238.1129)
│     ZPoint(2316.9094)
│     ⋮
│     ZPoint(17953.238)
│     ZPoint(23730.424)
└     ZPoint(30000.0)
[ Info: No surface orography warp applied
┌ Info: Resolution stats: 
│   Nq = 1
│   h_elem = 6
│   z_elem = 10
│   ncols = 1
└   ndofs_total = 10
[ Info: Allocating Y: 8.359 s (3171820 allocations: 199.13 MiB)
[ Info: Allocating cache (p): 69.056 s (37455882 allocations: 2.15 GiB)
[ Info: Using ODE config: `ClimaTimeSteppers.ARS343`
[ Info: ode_configuration: 923.421 μs (150 allocations: 10.77 KiB)
[ Info: Progress logging enabled
[ Info: Checking NaNs in the state every 1024 steps
[ Info: get_callbacks: 323.776 ms (105486 allocations: 7.56 MiB)
[ Info: Saving accumulated diagnostics to disk with frequency: 
[ Info: DictWriter: Any[]
[ Info: HDF5Writer: Any[]
[ Info: NetCDFWriter: Any[]
[ Info: initializing diagnostics: 365.791 ms (60071 allocations: 4.3 MiB)
[ Info: Prepared SciMLBase.CallbackSet callbacks: 20.5 μs (1 allocations: 272 bytes)
[ Info: n_steps_per_cycle_per_cb (non diagnostics): [1024, 1, 18]
[ Info: n_steps_per_cycle (non diagnostics): 9216

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 489 running 1 of 1

signal (10): User defined signal 1
jl_specializations_get_linfo_ at /source/src/gf.c:221
cache_method at /source/src/gf.c:1292
ml_matches at /source/src/gf.c:3925
ml_matches at /source/src/gf.c:3588 [inlined]
ijl_matching_methods at /source/src/gf.c:2284
_methods_by_ftype at ./reflection.jl:1031
_findall at ./compiler/methodtable.jl:105 [inlined]
#findall#283 at ./compiler/methodtable.jl:74 [inlined]
findall at ./compiler/methodtable.jl:73 [inlined]
#findall#285 at ./compiler/methodtable.jl:113
findall at ./compiler/methodtable.jl:110 [inlined]
find_matching_methods at ./compiler/abstractinterpretation.jl:289
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:24
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2904
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395

======================================================================================
Information request received. A stacktrace will print followed by a 1.0 second profile
======================================================================================

cmd: /opt/julia/bin/julia 1 running 0 of 1

signal (10): User defined signal 1
epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236
uv_run at /workspace/srcdir/libuv/src/unix/core.c:400
ijl_task_get_next at /source/src/partr.c:478
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
poptask at ./task.jl:999
_typeinf at ./compiler/typeinfer.jl:247
wait at ./task.jl:1008
#wait#647 at ./condition.jl:130
typeinf at ./compiler/typeinfer.jl:216
wait at ./condition.jl:125 [inlined]
wait at ./process.jl:661
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
jfptr_wait_74802.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
subprocess_handler at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2048
#130 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1992
withenv at ./env.jl:257
#117 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1840
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
with_temp_env at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1721
#115 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1810
#mktempdir#24 at ./file.jl:766
unknown function (ip: 0x76c3b0bd9cc0)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
mktempdir at ./file.jl:762
mktempdir at ./file.jl:762 [inlined]
#sandbox#114 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1768
sandbox at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1759
unknown function (ip: 0x76c3b0bd266d)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
#test#127 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1971
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
#test#146 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:423
unknown function (ip: 0x76c3b0bd2160)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
#test#77 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
unknown function (ip: 0x76c3b0bd1a20)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:148
#test#75 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
#test#74 at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
test at /source/usr/share/julia/stdlib/v1.10/Pkg/src/API.jl:146
unknown function (ip: 0x76c3b0bce119)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
do_call at /source/src/interpreter.c:126
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2904
eval_value at /source/src/interpreter.c:223
eval_stmt_value at /source/src/interpreter.c:174 [inlined]
eval_body at /source/src/interpreter.c:635
eval_body at /source/src/interpreter.c:544
eval_body at /source/src/interpreter.c:544
jl_interpret_toplevel_thunk at /source/src/interpreter.c:775
jl_toplevel_eval_flex at /source/src/toplevel.c:934
jl_toplevel_eval_flex at /source/src/toplevel.c:877
ijl_toplevel_eval_in at /source/src/toplevel.c:985
typeinf_local at ./compiler/abstractinterpretation.jl:3122
eval at ./boot.jl:385 [inlined]
include_string at ./loading.jl:2146
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_include at ./loading.jl:2206
_typeinf at ./compiler/typeinfer.jl:247
include at ./Base.jl:495
typeinf at ./compiler/typeinfer.jl:216
jfptr_include_46645.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
typeinf_edge at ./compiler/typeinfer.jl:930
exec_options at ./client.jl:323
abstract_call_method at ./compiler/abstractinterpretation.jl:633
_start at ./client.jl:557
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
jfptr__start_83099.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
true_main at /source/src/jlapi.c:582
jl_repl_entrypoint at /source/src/jlapi.c:731
main at /source/cli/loader_exe.c:58
unknown function (ip: 0x76c3b19e1249)
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8)
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================

abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
┌ Warning: There were no samples collected in one or more groups.
│ This may be due to idle threads, or you may need to run your
│ program longer (perhaps by running it multiple times),
│ or adjust the delay between samples with `Profile.init()`.
└ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225
Overhead ╎ [+additional indent] Count File:Line; Function
=========================================================
Thread 1 Task 0x000076c3a4400010 Total snapshots: 1. Utilization: 0%
 ╎1 @Base/client.jl:557; _start()
 ╎ 1 @Base/client.jl:323; exec_options(opts::Base.JLOptions)
 ╎  1 @Base/Base.jl:495; include(mod::Module, _path::String)
 ╎   1 @Base/loading.jl:2206; _include(mapexpr::Function, mod::Module, _path::S…
 ╎    1 @Base/loading.jl:2146; include_string(mapexpr::typeof(identity), mod::M…
 ╎     1 @Base/boot.jl:385; eval
 ╎    ╎ 1 @Pkg/src/API.jl:146; kwcall(::@NamedTuple{julia_args::Cmd}, ::typeof(…
 ╎    ╎  1 @Pkg/src/API.jl:146; #test#74
 ╎    ╎   1 @Pkg/src/API.jl:147; test
 ╎    ╎    1 @Pkg/src/API.jl:147; #test#75
 ╎    ╎     1 @Pkg/src/API.jl:148; kwcall(::@NamedTuple{julia_args::Cmd}, ::typ…
 ╎    ╎    ╎ 1 @Pkg/src/API.jl:159; test(pkgs::Vector{Pkg.Types.PackageSpec}; i…
 ╎    ╎    ╎  1 @Pkg/src/API.jl:423; kwcall(::@NamedTuple{julia_args::Cmd, io::…
 ╎    ╎    ╎   1 @Pkg/src/API.jl:444; test(ctx::Pkg.Types.Context, pkgs::Vector…
 ╎    ╎    ╎    1 …/src/Operations.jl:1915; test
 ╎    ╎    ╎     1 …src/Operations.jl:1971; test(ctx::Pkg.Types.Context, pkgs::…
 ╎    ╎    ╎    ╎ 1 …src/Operations.jl:1759; kwcall(::@NamedTuple{preferences::…
 ╎    ╎    ╎    ╎  1 …src/Operations.jl:1768; sandbox(fn::Function, ctx::Pkg.Ty…
 ╎    ╎    ╎    ╎   1 @Base/file.jl:762; mktempdir
 ╎    ╎    ╎    ╎    1 @Base/file.jl:762; mktempdir(fn::Function, parent::Strin…
 ╎    ╎    ╎    ╎     1 @Base/file.jl:766; mktempdir(fn::Pkg.Operations.var"#11…
 ╎    ╎    ╎    ╎    ╎ 1 …c/Operations.jl:1810; (::Pkg.Operations.var"#115#120"…
 ╎    ╎    ╎    ╎    ╎  1 …c/Operations.jl:1721; with_temp_env(fn::Pkg.Operatio…
 ╎    ╎    ╎    ╎    ╎   1 …/Operations.jl:1840; (::Pkg.Operations.var"#117#122…
 ╎    ╎    ╎    ╎    ╎    1 @Base/env.jl:257; withenv(::Pkg.Operations.var"#130…
 ╎    ╎    ╎    ╎    ╎     1 …Operations.jl:1992; (::Pkg.Operations.var"#130#13…
 ╎    ╎    ╎    ╎    ╎    ╎ 1 …Operations.jl:2048; subprocess_handler(cmd::Cmd,…
 ╎    ╎    ╎    ╎    ╎    ╎  1 …se/process.jl:661; wait(x::Base.Process)
 ╎    ╎    ╎    ╎    ╎    ╎   1 …/condition.jl:125; wait
 ╎    ╎    ╎    ╎    ╎    ╎    1 …condition.jl:130; wait(c::Base.GenericConditi…
 ╎    ╎    ╎    ╎    ╎    ╎     1 …ase/task.jl:1008; wait()
 ╎    ╎    ╎    ╎    ╎    ╎    ╎ 1 …ase/task.jl:999; poptask(W::Base.IntrusiveL…

abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2904
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_edge at ./compiler/typeinfer.jl:930
abstract_call_method at ./compiler/abstractinterpretation.jl:633
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95
abstract_call_known at ./compiler/abstractinterpretation.jl:2101
abstract_call at ./compiler/abstractinterpretation.jl:2184
abstract_call at ./compiler/abstractinterpretation.jl:2177
abstract_call at ./compiler/abstractinterpretation.jl:2369
abstract_eval_call at ./compiler/abstractinterpretation.jl:2385
abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395
abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639
abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928
typeinf_local at ./compiler/abstractinterpretation.jl:3122
typeinf_nocycle at ./compiler/abstractinterpretation.jl:3210
_typeinf at ./compiler/typeinfer.jl:247
typeinf at ./compiler/typeinfer.jl:216
typeinf_ext at ./compiler/typeinfer.jl:1051
typeinf_ext_toplevel at ./compiler/typeinfer.jl:1082
typeinf_ext_toplevel at ./compiler/typeinfer.jl:1078
jfptr_typeinf_ext_toplevel_35735.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
jl_type_infer at /source/src/gf.c:394
jl_generate_fptr_impl at /source/src/jitlayers.cpp:512
jl_compile_method_internal at /source/src/gf.c:2481 [inlined]
jl_compile_method_internal at /source/src/gf.c:2368
_jl_invoke at /source/src/gf.c:2887 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
macro expansion at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:873 [inlined]
macro expansion at ./timing.jl:503 [inlined]
macro expansion at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/utils/utilities.jl:336 [inlined]
get_simulation at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/solver/type_getters.jl:872
AtmosSimulation at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/src/simulation/AtmosSimulations.jl:38 [inlined]
generate_test_simulation at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/test_helpers.jl:24
unknown function (ip: 0x74c2f3f2f505)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
macro expansion at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/parameterized_tendencies/microphysics/precipitation.jl:94 [inlined]
macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
top-level scope at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/parameterized_tendencies/microphysics/precipitation.jl:84
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_invoke at /source/src/gf.c:2902
jl_toplevel_eval_flex at /source/src/toplevel.c:925
jl_toplevel_eval_flex at /source/src/toplevel.c:877
ijl_toplevel_eval_in at /source/src/toplevel.c:985
eval at ./boot.jl:385 [inlined]
include_string at ./loading.jl:2146
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
_include at ./loading.jl:2206
include at ./Base.jl:495
jfptr_include_46645.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
jl_f__call_latest at /source/src/builtins.c:812
include at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:28 [inlined]
macro expansion at ./timing.jl:279 [inlined]
macro expansion at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/runtests.jl:31 [inlined]
macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
macro expansion at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/runtests.jl:31 [inlined]
top-level scope at /home/pkgeval/.julia/packages/SafeTestsets/raUNr/src/SafeTestsets.jl:30
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_invoke at /source/src/gf.c:2902
jl_toplevel_eval_flex at /source/src/toplevel.c:925
jl_eval_module_expr at /source/src/toplevel.c:215 [inlined]
jl_toplevel_eval_flex at /source/src/toplevel.c:736
ijl_toplevel_eval_in at /source/src/toplevel.c:985
eval at ./boot.jl:385
jfptr_eval_25794.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
do_call at /source/src/interpreter.c:126
eval_value at /source/src/interpreter.c:223
eval_stmt_value at /source/src/interpreter.c:174 [inlined]
eval_body at /source/src/interpreter.c:635
jl_interpret_toplevel_thunk at /source/src/interpreter.c:775
jl_toplevel_eval_flex at /source/src/toplevel.c:934
jl_toplevel_eval_flex at /source/src/toplevel.c:877
ijl_toplevel_eval_in at /source/src/toplevel.c:985
eval at ./boot.jl:385 [inlined]
include_string at ./loading.jl:2146
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
_include at ./loading.jl:2206
include at ./client.jl:494
unknown function (ip: 0x74c319f55125)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
do_call at /source/src/interpreter.c:126
eval_value at /source/src/interpreter.c:223
eval_stmt_value at /source/src/interpreter.c:174 [inlined]
eval_body at /source/src/interpreter.c:635
jl_interpret_toplevel_thunk at /source/src/interpreter.c:775
jl_toplevel_eval_flex at /source/src/toplevel.c:934
jl_toplevel_eval_flex at /source/src/toplevel.c:877
ijl_toplevel_eval_in at /source/src/toplevel.c:985
eval at ./boot.jl:385 [inlined]
exec_options at ./client.jl:296
_start at ./client.jl:557
jfptr__start_83099.1 at /opt/julia/lib/julia/sys.so (unknown line)
_jl_invoke at /source/src/gf.c:2876 [inlined]
ijl_apply_generic at /source/src/gf.c:3077
jl_apply at /source/src/julia.h:1982 [inlined]
true_main at /source/src/jlapi.c:582
jl_repl_entrypoint at /source/src/jlapi.c:731
main at /source/cli/loader_exe.c:58
unknown function (ip: 0x74c31ad8b249)
__libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line)
unknown function (ip: 0x4010b8)
unknown function (ip: (nil))

==============================================================
Profile collected. A report will print at the next yield point
==============================================================


[489] signal (15): Terminated
in expression starting at /home/pkgeval/.julia/packages/ClimaAtmos/ciLMs/test/parameterized_tendencies/microphysics/precipitation.jl:81
egal_types at /source/src/builtins.c:159
egal_types at /source/src/builtins.c:162
ijl_types_equal at /source/src/subtype.c:2284
jl_specializations_get_linfo_ at /source/src/gf.c:221
cache_method at /source/src/gf.c:1292
ml_matches at /source/src/gf.c:3925
ml_matches at /source/src/gf.c:3588 [inlined]
ijl_matching_methods at /source/src/gf.c:2284
_methods_by_ftype at ./reflection.jl:1031
_findall at ./compiler/methodtable.jl:105 [inlined]
#findall#283 at ./compiler/methodtable.jl:74 [inlined]
findall at ./compiler/methodtable.jl:73 [inlined]
#findall#285 at ./compiler/methodtable.jl:113
findall at ./compiler/methodtable.jl:110 [inlined]
find_matching_methods at ./compiler/abstractinterpretation.jl:289
abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:24
abstract_call_known at ./compiler/abstractinterpretation.jl:2101

PkgEval terminated after 2732.09s: test duration exceeded the time limit