Package evaluation of BedgraphFiles on Julia 1.10.9 (96dc2d8c45*) started at 2025-06-06T13:28:01.916


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.19s


################################################################################
# Installation
#

Installing BedgraphFiles...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [85eb9095] + BedgraphFiles v2.4.0
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [0bcc2ff6] + Bedgraph v2.3.0
  [85eb9095] + BedgraphFiles v2.4.0
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [e7dc6d0d] + DataValues v0.4.13
  [5789e2e9] + FileIO v1.17.0
  [1c8ee90f] + IterableTables v1.0.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [682c06a0] + JSON v0.21.4
  [e1d29d7a] + Missings v1.2.0
  [69de0a69] + Parsers v2.8.3
⌅ [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [ae029012] + Requires v1.3.1
  [5e66a065] + TableShowUtils v0.2.6
  [3783bdb8] + TableTraits v1.0.1
  [382cd787] + TableTraitsUtils v1.0.2
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [b77e0a4c] + InteractiveUtils
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 5.14s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 18.88s


################################################################################
# Testing
#

     Testing BedgraphFiles
      Status `/tmp/jl_ichtV2/Project.toml`
  [0bcc2ff6] Bedgraph v2.3.0
  [85eb9095] BedgraphFiles v2.4.0
  [a93c6f00] DataFrames v1.7.0
  [e7dc6d0d] DataValues v0.4.13
  [5789e2e9] FileIO v1.17.0
  [1c8ee90f] IterableTables v1.0.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [1a8c2f83] Query v1.0.0
  [5e66a065] TableShowUtils v0.2.6
  [3783bdb8] TableTraits v1.0.1
  [382cd787] TableTraitsUtils v1.0.2
  [56ddb016] Logging
  [8dfed614] Test
      Status `/tmp/jl_ichtV2/Manifest.toml`
  [0bcc2ff6] Bedgraph v2.3.0
  [85eb9095] BedgraphFiles v2.4.0
  [34da2185] Compat v4.16.0
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [e7dc6d0d] DataValues v0.4.13
  [5789e2e9] FileIO v1.17.0
  [842dd82b] InlineStrings v1.4.3
  [41ab1584] InvertedIndices v1.3.1
  [1c8ee90f] IterableTables v1.0.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [1914dd2f] MacroTools v0.5.16
  [e1d29d7a] Missings v1.2.0
  [bac558e1] OrderedCollections v1.8.1
  [69de0a69] Parsers v2.8.3
  [2dfb63ee] PooledArrays v1.4.3
⌅ [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [1a8c2f83] Query v1.0.0
  [2aef5ad7] QueryOperators v0.9.3
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [91c51154] SentinelArrays v1.4.8
  [a2af1166] SortingAlgorithms v1.2.1
  [892a3eda] StringManipulation v0.4.1
  [5e66a065] TableShowUtils v0.2.6
  [3783bdb8] TableTraits v1.0.1
  [382cd787] TableTraitsUtils v1.0.2
  [bd369af6] Tables v1.12.1
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...

9x4 bedGraph file
chrom │ first    │ last     │ value
──────┼──────────┼──────────┼──────
chr19 │ 49302000 │ 49302300 │ -1.0 
chr19 │ 49302300 │ 49302600 │ -0.75
chr19 │ 49302600 │ 49302900 │ -0.5 
chr19 │ 49302900 │ 49303200 │ -0.25
chr19 │ 49303200 │ 49303500 │ 0.0  
chr19 │ 49303500 │ 49303800 │ 0.25 
chr19 │ 49303800 │ 49304100 │ 0.5  
chr19 │ 49304100 │ 49304400 │ 0.75 
chr19 │ 49304400 │ 49304700 │ 1.0  
Test Summary: | Pass  Total   Time
BedgraphFiles |   42     42  36.7s
     Testing BedgraphFiles tests passed 

Testing completed after 43.26s

PkgEval succeeded after 75.39s