Package evaluation of TrajGWAS on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T14:52:24.906


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 4.93s


################################################################################
# Installation
#

Installing TrajGWAS...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [9514c204] + TrajGWAS v0.4.6
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.41
  [79e6a3ab] + Adapt v4.2.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.18.0
⌅ [67c07d97] + Automa v0.8.4
⌃ [13072b0f] + AxisAlgorithms v1.0.1
⌅ [6db4b851] + BGEN v0.1.17
  [28d598bf] + BGZFStreams v0.3.2
  [6e4b80f9] + BenchmarkTools v1.6.0
  [47718e42] + BioGenerics v0.1.5
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] + BufferedStreams v1.2.2
  [2a0fbf3d] + CPUSummary v0.2.6
  [336ed68f] + CSV v0.10.15
  [324d7699] + CategoricalArrays v0.10.8
  [d360d2e6] + ChainRulesCore v1.25.1
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [523fee87] + CodecBzip2 v0.8.5
  [ba30903b] + CodecXz v0.7.4
  [944b1d66] + CodecZlib v0.7.8
  [6b39b394] + CodecZstd v0.8.6
  [861a8166] + Combinatorics v1.0.2
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.5.8
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [a10d1c49] + DBInterface v2.6.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [31c24e10] + Distributions v0.25.117
  [ffbed154] + DocStringExtensions v0.9.3
  [48062228] + FilePathsBase v0.9.23
  [1a297f60] + FillArrays v1.13.0
  [6a86dc24] + FiniteDiff v2.27.0
  [f6369f11] + ForwardDiff v0.10.38
  [c27321d9] + Glob v1.3.1
  [3e5b6fbb] + HostCPUFeatures v0.1.17
  [34004b35] + HypergeometricFunctions v0.3.27
  [09f84164] + HypothesisTests v0.11.3
  [615f187c] + IfElse v0.1.1
  [842dd82b] + InlineStrings v1.4.3
⌅ [a98d9a8b] + Interpolations v0.14.0
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
  [b6b21f68] + Ipopt v1.7.2
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [0f8b85d8] + JSON3 v1.14.1
  [b964fa9f] + LaTeXStrings v1.4.0
  [10f19ff3] + LayoutPointers v0.1.17
  [d3d80556] + LineSearches v7.3.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [bdcacae8] + LoopVectorization v0.12.171
  [1914dd2f] + MacroTools v0.5.15
  [d125e4d3] + ManualMemory v0.1.8
  [b8f27783] + MathOptInterface v1.37.0
  [fdba3010] + MathProgBase v0.7.8
  [e1d29d7a] + Missings v1.2.0
  [d8a4904e] + MutableArithmetics v1.6.4
  [d41bc354] + NLSolversBase v7.8.3
⌅ [76087f3c] + NLopt v0.6.5
  [77ba4419] + NaNMath v1.1.2
  [6fe1bfb0] + OffsetArrays v1.15.0
  [429524aa] + Optim v1.11.0
  [bac558e1] + OrderedCollections v1.8.0
  [90014a1f] + PDMats v0.11.32
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.1
  [1d0040c9] + PolyesterWeave v0.2.2
  [2dfb63ee] + PooledArrays v1.4.3
  [85a6dd25] + PositiveFactorizations v0.2.4
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [92933f4c] + ProgressMeter v1.10.2
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [c84ed2f1] + Ratios v0.4.5
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [79098fc4] + Rmath v0.8.0
  [f2b01f46] + Roots v2.2.5
  [fdea26ae] + SIMD v3.7.1
  [94e857df] + SIMDTypes v0.1.0
  [476501e8] + SLEEFPirates v0.6.43
  [0aa819cd] + SQLite v1.6.1
  [91c51154] + SentinelArrays v1.4.8
  [efcf1570] + Setfield v1.1.1
  [1277b4bf] + ShiftedArrays v2.0.0
  [4e780e97] + SnpArrays v0.3.22
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.0
  [aedffcd0] + Static v1.1.1
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.3.2
  [3eaba693] + StatsModels v0.7.4
  [892a3eda] + StringManipulation v0.4.1
  [856f2bd8] + StructTypes v1.11.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [8290d209] + ThreadingUtilities v0.5.2
  [9514c204] + TrajGWAS v0.4.6
⌅ [3bb67fe8] + TranscodingStreams v0.9.13
  [3a884ed6] + UnPack v1.0.2
  [a620830f] + VCFTools v0.2.10
  [28eba6e3] + VariantCallFormat v0.5.6
  [3d5dd08c] + VectorizationBase v0.21.71
  [ea10d353] + WeakRefStrings v1.4.2
  [2ff19380] + WiSER v0.2.6
⌅ [efce3f68] + WoodburyMatrices v0.5.6
  [76eceee3] + WorkerUtilities v1.6.1
  [ae81ac8f] + ASL_jll v0.1.3+0
  [6e34b625] + Bzip2_jll v1.0.9+0
  [e33a78d0] + Hwloc_jll v2.12.0+0
  [9cc047cb] + Ipopt_jll v300.1400.1700+0
  [d00139f3] + METIS_jll v5.1.3+0
  [d7ed1dd3] + MUMPS_seq_jll v500.700.301+0
  [079eb43e] + NLopt_jll v2.10.0+0
⌅ [656ef2d0] + OpenBLAS32_jll v0.3.24+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
⌅ [319450e9] + SPRAL_jll v2024.5.8+0
  [76ed43ae] + SQLite_jll v3.48.0+0
  [ffd25f8a] + XZ_jll v5.6.4+1
  [3161d3a3] + Zstd_jll v1.5.7+1
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [9abbd945] + Profile
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [1a1011a3] + SharedArrays
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 9.72s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 500.69s


################################################################################
# Testing
#

     Testing TrajGWAS
      Status `/tmp/jl_IGiZUt/Project.toml`
⌅ [6db4b851] BGEN v0.1.17
  [336ed68f] CSV v0.10.15
  [a93c6f00] DataFrames v1.7.0
  [31c24e10] Distributions v0.25.117
⌅ [a98d9a8b] Interpolations v0.14.0
  [b8f27783] MathOptInterface v1.37.0
  [429524aa] Optim v1.11.0
  [189a3867] Reexport v1.2.2
  [4e780e97] SnpArrays v0.3.22
  [2913bbd2] StatsBase v0.34.4
  [3eaba693] StatsModels v0.7.4
  [bd369af6] Tables v1.12.0
  [9514c204] TrajGWAS v0.4.6
  [a620830f] VCFTools v0.2.10
  [28eba6e3] VariantCallFormat v0.5.6
  [2ff19380] WiSER v0.2.6
  [37e2e46d] LinearAlgebra
  [de0858da] Printf
  [10745b16] Statistics v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_IGiZUt/Manifest.toml`
  [7d9f7c33] Accessors v0.1.41
  [79e6a3ab] Adapt v4.2.0
  [66dad0bd] AliasTables v1.1.3
  [4fba245c] ArrayInterface v7.18.0
⌅ [67c07d97] Automa v0.8.4
⌃ [13072b0f] AxisAlgorithms v1.0.1
⌅ [6db4b851] BGEN v0.1.17
  [28d598bf] BGZFStreams v0.3.2
  [6e4b80f9] BenchmarkTools v1.6.0
  [47718e42] BioGenerics v0.1.5
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] BufferedStreams v1.2.2
  [2a0fbf3d] CPUSummary v0.2.6
  [336ed68f] CSV v0.10.15
  [324d7699] CategoricalArrays v0.10.8
  [d360d2e6] ChainRulesCore v1.25.1
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [523fee87] CodecBzip2 v0.8.5
  [ba30903b] CodecXz v0.7.4
  [944b1d66] CodecZlib v0.7.8
  [6b39b394] CodecZstd v0.8.6
  [861a8166] Combinatorics v1.0.2
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [187b0558] ConstructionBase v1.5.8
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [a10d1c49] DBInterface v2.6.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [48062228] FilePathsBase v0.9.23
  [1a297f60] FillArrays v1.13.0
  [6a86dc24] FiniteDiff v2.27.0
  [f6369f11] ForwardDiff v0.10.38
  [c27321d9] Glob v1.3.1
  [3e5b6fbb] HostCPUFeatures v0.1.17
  [34004b35] HypergeometricFunctions v0.3.27
  [09f84164] HypothesisTests v0.11.3
  [615f187c] IfElse v0.1.1
  [842dd82b] InlineStrings v1.4.3
⌅ [a98d9a8b] Interpolations v0.14.0
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
  [b6b21f68] Ipopt v1.7.2
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [0f8b85d8] JSON3 v1.14.1
  [b964fa9f] LaTeXStrings v1.4.0
  [10f19ff3] LayoutPointers v0.1.17
  [d3d80556] LineSearches v7.3.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [bdcacae8] LoopVectorization v0.12.171
  [1914dd2f] MacroTools v0.5.15
  [d125e4d3] ManualMemory v0.1.8
  [b8f27783] MathOptInterface v1.37.0
  [fdba3010] MathProgBase v0.7.8
  [e1d29d7a] Missings v1.2.0
  [d8a4904e] MutableArithmetics v1.6.4
  [d41bc354] NLSolversBase v7.8.3
⌅ [76087f3c] NLopt v0.6.5
  [77ba4419] NaNMath v1.1.2
  [6fe1bfb0] OffsetArrays v1.15.0
  [429524aa] Optim v1.11.0
  [bac558e1] OrderedCollections v1.8.0
  [90014a1f] PDMats v0.11.32
  [d96e819e] Parameters v0.12.3
  [69de0a69] Parsers v2.8.1
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [85a6dd25] PositiveFactorizations v0.2.4
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [92933f4c] ProgressMeter v1.10.2
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [c84ed2f1] Ratios v0.4.5
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [79098fc4] Rmath v0.8.0
  [f2b01f46] Roots v2.2.5
  [fdea26ae] SIMD v3.7.1
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.43
  [0aa819cd] SQLite v1.6.1
  [91c51154] SentinelArrays v1.4.8
  [efcf1570] Setfield v1.1.1
  [1277b4bf] ShiftedArrays v2.0.0
  [4e780e97] SnpArrays v0.3.22
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.0
  [aedffcd0] Static v1.1.1
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.3.2
  [3eaba693] StatsModels v0.7.4
  [892a3eda] StringManipulation v0.4.1
  [856f2bd8] StructTypes v1.11.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [8290d209] ThreadingUtilities v0.5.2
  [9514c204] TrajGWAS v0.4.6
⌅ [3bb67fe8] TranscodingStreams v0.9.13
  [3a884ed6] UnPack v1.0.2
  [a620830f] VCFTools v0.2.10
  [28eba6e3] VariantCallFormat v0.5.6
  [3d5dd08c] VectorizationBase v0.21.71
  [ea10d353] WeakRefStrings v1.4.2
  [2ff19380] WiSER v0.2.6
⌅ [efce3f68] WoodburyMatrices v0.5.6
  [76eceee3] WorkerUtilities v1.6.1
  [ae81ac8f] ASL_jll v0.1.3+0
  [6e34b625] Bzip2_jll v1.0.9+0
  [e33a78d0] Hwloc_jll v2.12.0+0
  [9cc047cb] Ipopt_jll v300.1400.1700+0
  [d00139f3] METIS_jll v5.1.3+0
  [d7ed1dd3] MUMPS_seq_jll v500.700.301+0
  [079eb43e] NLopt_jll v2.10.0+0
⌅ [656ef2d0] OpenBLAS32_jll v0.3.24+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
⌅ [319450e9] SPRAL_jll v2024.5.8+0
  [76ed43ae] SQLite_jll v3.48.0+0
  [ffd25f8a] XZ_jll v5.6.4+1
  [3161d3a3] Zstd_jll v1.5.7+1
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [9abbd945] Profile
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [1a1011a3] SharedArrays
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [05823500] OpenLibm_jll v0.8.1+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...

******************************************************************************
This program contains Ipopt, a library for large-scale nonlinear optimization.
 Ipopt is released as open source code under the Eclipse Public License (EPL).
         For more information visit https://github.com/coin-or/Ipopt
******************************************************************************

run = 1, ‖Δβ‖ = 0.226739, ‖Δτ‖ = 0.457389, ‖ΔL‖ = 0.109248, status = LOCALLY_SOLVED, time(s) = 1.722697
run = 2, ‖Δβ‖ = 0.057532, ‖Δτ‖ = 0.014932, ‖ΔL‖ = 0.041254, status = LOCALLY_SOLVED, time(s) = 0.147044
Test Summary: | Pass  Total     Time
generic       |    4      4  1m07.1s
Test Summary:     | Pass  Total   Time
generic_invariant |    4      4  13.9s
run = 1, ‖Δβ‖ = 0.037090, ‖Δτ‖ = 0.136339, ‖ΔL‖ = 0.005441, status = LOCALLY_SOLVED, time(s) = 0.069375
run = 2, ‖Δβ‖ = 0.000913, ‖Δτ‖ = 0.019810, ‖ΔL‖ = 0.001582, status = LOCALLY_SOLVED, time(s) = 0.058728
0.2089229077734306
0.19055788036352628
run = 1, ‖Δβ‖ = 0.037090, ‖Δτ‖ = 0.136339, ‖ΔL‖ = 0.005441, status = LOCALLY_SOLVED, time(s) = 0.065233
run = 2, ‖Δβ‖ = 0.000913, ‖Δτ‖ = 0.019810, ‖ΔL‖ = 0.001582, status = LOCALLY_SOLVED, time(s) = 0.061960
WARNING: using deprecated binding Distributions.MatrixReshaped in WiSER.
, use Distributions.ReshapedDistribution{2, S, D} where D<:Distributions.Distribution{Distributions.ArrayLikeVariate{1}, S} where S<:Distributions.ValueSupport instead.
WARNING: using deprecated binding WiSER.MatrixReshaped in TrajGWAS.
, use Distributions.ReshapedDistribution{2, S, D} where D<:Distributions.Distribution{Distributions.ArrayLikeVariate{1}, S} where S<:Distributions.ValueSupport instead.
WARNING: both StatsModels and WiSER export "coefnames"; uses of it in module TrajGWAS must be qualified
WARNING: both Distributions and VCFTools export "nsamples"; uses of it in module TrajGWAS must be qualified
WARNING: both Interpolations and WiSER export "scale"; uses of it in module TrajGWAS must be qualified
trajgwas_singlesnp_plink: Error During Test at /home/pkgeval/.julia/packages/TrajGWAS/R4aGq/test/runtests.jl:89
  Got exception outside of a @test
  UndefVarError: `linear_interpolation` not defined
  Stacktrace:
    [1] ecgf(vs::Vector{Float64}, zs::Vector{Float64})
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/spa.jl:39
    [2] ecgf(z::Vector{Float64}; knots::Int64)
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/spa.jl:13
    [3] ecgf
      @ ~/.julia/packages/TrajGWAS/R4aGq/src/spa.jl:7 [inlined]
    [4] ecgf(st::WSVarScoreTestInvariant{Float64})
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/spa.jl:58
    [5] (::TrajGWAS.var"#27#39"{FormulaTerm{Term, Term}, Bool, Symbol, Val{1}, Bool, Bool, UnitRange{Int64}, Ipopt.Optimizer, Dict{String, Any}, typeof(init_ls!), Bool, Int64, Float64, Nothing, Float64, WSVarLmmModel{Float64}, String, Bool, Vector{Float64}, Matrix{Int64}, SnpArrays.SnpArray})(io::IOStream)
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:456
    [6] makestream(::TrajGWAS.var"#27#39"{FormulaTerm{Term, Term}, Bool, Symbol, Val{1}, Bool, Bool, UnitRange{Int64}, Ipopt.Optimizer, Dict{String, Any}, typeof(init_ls!), Bool, Int64, Float64, Nothing, Float64, WSVarLmmModel{Float64}, String, Bool, Vector{Float64}, Matrix{Int64}, SnpArrays.SnpArray}, ::String, ::Vararg{String})
      @ SnpArrays ~/.julia/packages/SnpArrays/CSYLc/src/codec.jl:31
    [7] trajgwas(fittednullmodel::WSVarLmmModel{Float64}, bedfile::String, bimfile::String, bedn::Int64; analysistype::String, testformula::FormulaTerm{Term, Term}, disable_wsvar::Bool, test::Symbol, pvalfile::String, snpmodel::Val{1}, snpinds::Nothing, usespa::Bool, reportchisq::Bool, bedrowinds::UnitRange{Int64}, solver::Ipopt.Optimizer, solver_config::Dict{String, Any}, init::typeof(init_ls!), parallel::Bool, runs::Int64, verbose::Bool, snpset::Nothing, e::Nothing, r::Float64, adjustor::Nothing, adj_cutoff::Float64)
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:446
    [8] trajgwas(fittednullmodel::WSVarLmmModel{Float64}, geneticfile::String; analysistype::String, geneticformat::String, vcftype::Nothing, samplepath::Nothing, testformula::FormulaTerm{Term, Term}, testformula_wsvar::FormulaTerm{Term, Term}, test::Symbol, init::Function, pvalfile::String, snpmodel::Val{1}, snpinds::Nothing, usespa::Bool, reportchisq::Bool, geneticrowinds::Nothing, solver::Ipopt.Optimizer, solver_config::Dict{String, Any}, parallel::Bool, runs::Int64, verbose::Bool, snpset::Nothing, e::Nothing, kwargs::@Kwargs{})
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:305
    [9] trajgwas(nullmeanformula::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, Term}}, reformula::FormulaTerm{Term, ConstantTerm{Int64}}, nullwsvarformula::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, Term}}, idvar::Symbol, nulldf::DataFrame, geneticfile::String; nullfile::String, solver::Ipopt.Optimizer, solver_config::Dict{String, Any}, parallel::Bool, runs::Int64, verbose::Bool, init::typeof(init_ls!), test::Symbol, kwargs::@Kwargs{pvalfile::String, usespa::Bool})
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:182
   [10] trajgwas
      @ ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:150 [inlined]
   [11] trajgwas(nullmeanformula::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, Term}}, reformula::FormulaTerm{Term, ConstantTerm{Int64}}, nullwsvarformula::FormulaTerm{Term, Tuple{ConstantTerm{Int64}, Term, Term}}, idvar::Symbol, covfile::String, geneticfile::String; covtype::Nothing, covrowinds::Nothing, kwargs::@Kwargs{pvalfile::String, usespa::Bool})
      @ TrajGWAS ~/.julia/packages/TrajGWAS/R4aGq/src/gwas.jl:145
   [12] macro expansion
      @ ~/.julia/packages/TrajGWAS/R4aGq/test/runtests.jl:106 [inlined]
   [13] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
   [14] top-level scope
      @ ~/.julia/packages/TrajGWAS/R4aGq/test/runtests.jl:90
   [15] include(fname::String)
      @ Base.MainInclude ./client.jl:494
   [16] top-level scope
      @ none:6
   [17] eval
      @ ./boot.jl:385 [inlined]
   [18] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:296
   [19] _start()
      @ Base ./client.jl:557
Test Summary:            | Pass  Error  Total   Time
trajgwas_singlesnp_plink |    1      1      2  47.0s
ERROR: LoadError: Some tests did not pass: 1 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/TrajGWAS/R4aGq/test/runtests.jl:89

Testing failed after 283.86s

ERROR: LoadError: Package TrajGWAS errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 839.48s: package tests unexpectedly errored