Package evaluation of TraitSimulation on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T15:07:47.317


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 3.78s


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# Installation
#

Installing TraitSimulation...
   Resolving package versions...
   Installed Ipopt ─ v0.8.0
    Updating `~/.julia/environments/v1.10/Project.toml`
  [dec3038e] + TraitSimulation v0.1.2
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [a4c015fc] + ANSIColoredPrinters v0.0.1
  [79e6a3ab] + Adapt v4.2.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.18.0
⌅ [67c07d97] + Automa v0.8.4
  [28d598bf] + BGZFStreams v0.3.2
  [6e4b80f9] + BenchmarkTools v1.6.0
  [b99e7846] + BinaryProvider v0.5.10
  [47718e42] + BioGenerics v0.1.5
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] + BufferedStreams v1.2.2
  [2a0fbf3d] + CPUSummary v0.2.6
  [336ed68f] + CSV v0.10.15
  [324d7699] + CategoricalArrays v0.10.8
  [d360d2e6] + ChainRulesCore v1.25.1
  [fb6a15b2] + CloseOpenIntervals v0.1.13
⌅ [523fee87] + CodecBzip2 v0.7.2
  [ba30903b] + CodecXz v0.7.4
  [944b1d66] + CodecZlib v0.7.8
  [6b39b394] + CodecZstd v0.8.6
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [31c24e10] + Distributions v0.25.117
  [ffbed154] + DocStringExtensions v0.9.3
⌅ [e30172f5] + Documenter v0.27.25
  [e2ba6199] + ExprTools v0.1.10
  [5789e2e9] + FileIO v1.16.6
  [48062228] + FilePathsBase v0.9.23
  [1a297f60] + FillArrays v1.13.0
⌃ [38e38edf] + GLM v1.8.3
  [c27321d9] + Glob v1.3.1
  [3e5b6fbb] + HostCPUFeatures v0.1.17
  [b5f81e59] + IOCapture v0.2.5
  [615f187c] + IfElse v0.1.1
  [842dd82b] + InlineStrings v1.4.3
  [3587e190] + InverseFunctions v0.1.17
  [41ab1584] + InvertedIndices v1.3.1
⌅ [b6b21f68] + Ipopt v0.8.0
⌅ [92d709cd] + IrrationalConstants v0.1.1
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [10f19ff3] + LayoutPointers v0.1.17
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [bdcacae8] + LoopVectorization v0.12.171
  [d125e4d3] + ManualMemory v0.1.8
⌅ [b8f27783] + MathOptInterface v0.10.9
  [fdba3010] + MathProgBase v0.7.8
  [e1d29d7a] + Missings v1.2.0
  [78c3b35d] + Mocking v0.8.1
⌅ [d8a4904e] + MutableArithmetics v0.3.3
⌅ [76087f3c] + NLopt v0.6.5
  [6fe1bfb0] + OffsetArrays v1.15.0
  [bac558e1] + OrderedCollections v1.8.0
⌅ [b51826c6] + OrdinalMultinomialModels v0.3.5
  [90014a1f] + PDMats v0.11.32
  [69de0a69] + Parsers v2.8.1
  [1d0040c9] + PolyesterWeave v0.2.2
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
⌅ [df47a6cb] + RData v0.8.3
  [ce6b1742] + RDatasets v0.7.7
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
⌅ [79098fc4] + Rmath v0.7.1
  [94e857df] + SIMDTypes v0.1.0
  [476501e8] + SLEEFPirates v0.6.43
  [6c6a2e73] + Scratch v1.2.1
  [91c51154] + SentinelArrays v1.4.8
  [1277b4bf] + ShiftedArrays v2.0.0
  [4e780e97] + SnpArrays v0.3.22
  [a2af1166] + SortingAlgorithms v1.2.1
⌅ [276daf66] + SpecialFunctions v1.8.8
  [aedffcd0] + Static v1.1.1
  [0d7ed370] + StaticArrayInterface v1.8.0
  [82ae8749] + StatsAPI v1.7.0
⌅ [2913bbd2] + StatsBase v0.33.21
⌅ [4c63d2b9] + StatsFuns v0.9.18
⌅ [3eaba693] + StatsModels v0.6.33
  [892a3eda] + StringManipulation v0.4.1
  [fd094767] + Suppressor v0.2.8
  [dc5dba14] + TZJData v1.4.0+2025a
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [8290d209] + ThreadingUtilities v0.5.2
  [f269a46b] + TimeZones v1.21.2
  [dec3038e] + TraitSimulation v0.1.2
⌅ [3bb67fe8] + TranscodingStreams v0.9.13
  [3a884ed6] + UnPack v1.0.2
  [813005db] + VarianceComponentModels v0.1.3
  [28eba6e3] + VariantCallFormat v0.5.6
  [3d5dd08c] + VectorizationBase v0.21.71
  [ea10d353] + WeakRefStrings v1.4.2
  [76eceee3] + WorkerUtilities v1.6.1
  [ae81ac8f] + ASL_jll v0.1.3+0
  [6e34b625] + Bzip2_jll v1.0.9+0
⌅ [9cc047cb] + Ipopt_jll v3.13.4+2
  [d00139f3] + METIS_jll v5.1.3+0
⌅ [d7ed1dd3] + MUMPS_seq_jll v5.2.1+4
  [079eb43e] + NLopt_jll v2.10.0+0
⌅ [656ef2d0] + OpenBLAS32_jll v0.3.24+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
⌅ [f50d1b31] + Rmath_jll v0.4.3+0
  [ffd25f8a] + XZ_jll v5.6.4+1
  [3161d3a3] + Zstd_jll v1.5.7+1
  [0dad84c5] + ArgTools v1.1.1
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  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
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  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
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  [9e88b42a] + Serialization
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  [10745b16] + Statistics v1.10.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
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  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
    Building Ipopt → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/539b23ab8fb86c6cc3e8cacaeb1f784415951be5/build.log`

Installation completed after 7.37s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 455.62s


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# Testing
#

     Testing TraitSimulation
      Status `/tmp/jl_Ai9ciX/Project.toml`
  [6e4b80f9] BenchmarkTools v1.6.0
  [a93c6f00] DataFrames v1.7.0
  [8bb1440f] DelimitedFiles v1.9.1
  [31c24e10] Distributions v0.25.117
⌅ [e30172f5] Documenter v0.27.25
⌃ [38e38edf] GLM v1.8.3
⌅ [b51826c6] OrdinalMultinomialModels v0.3.5
  [4e780e97] SnpArrays v0.3.22
⌅ [276daf66] SpecialFunctions v1.8.8
⌅ [2913bbd2] StatsBase v0.33.21
⌅ [4c63d2b9] StatsFuns v0.9.18
⌅ [3eaba693] StatsModels v0.6.33
  [fd094767] Suppressor v0.2.8
  [bd369af6] Tables v1.12.0
  [dec3038e] TraitSimulation v0.1.2
  [813005db] VarianceComponentModels v0.1.3
  [37e2e46d] LinearAlgebra
  [44cfe95a] Pkg v1.10.0
  [9a3f8284] Random
  [10745b16] Statistics v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_Ai9ciX/Manifest.toml`
  [a4c015fc] ANSIColoredPrinters v0.0.1
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⌅ [67c07d97] Automa v0.8.4
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  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
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  [336ed68f] CSV v0.10.15
  [324d7699] CategoricalArrays v0.10.8
  [d360d2e6] ChainRulesCore v1.25.1
  [fb6a15b2] CloseOpenIntervals v0.1.13
⌅ [523fee87] CodecBzip2 v0.7.2
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  [34da2185] Compat v4.16.0
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [31c24e10] Distributions v0.25.117
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⌅ [e30172f5] Documenter v0.27.25
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  [5789e2e9] FileIO v1.16.6
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  [1a297f60] FillArrays v1.13.0
⌃ [38e38edf] GLM v1.8.3
  [c27321d9] Glob v1.3.1
  [3e5b6fbb] HostCPUFeatures v0.1.17
  [b5f81e59] IOCapture v0.2.5
  [615f187c] IfElse v0.1.1
  [842dd82b] InlineStrings v1.4.3
  [3587e190] InverseFunctions v0.1.17
  [41ab1584] InvertedIndices v1.3.1
⌅ [b6b21f68] Ipopt v0.8.0
⌅ [92d709cd] IrrationalConstants v0.1.1
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
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  [bdcacae8] LoopVectorization v0.12.171
  [d125e4d3] ManualMemory v0.1.8
⌅ [b8f27783] MathOptInterface v0.10.9
  [fdba3010] MathProgBase v0.7.8
  [e1d29d7a] Missings v1.2.0
  [78c3b35d] Mocking v0.8.1
⌅ [d8a4904e] MutableArithmetics v0.3.3
⌅ [76087f3c] NLopt v0.6.5
  [6fe1bfb0] OffsetArrays v1.15.0
  [bac558e1] OrderedCollections v1.8.0
⌅ [b51826c6] OrdinalMultinomialModels v0.3.5
  [90014a1f] PDMats v0.11.32
  [69de0a69] Parsers v2.8.1
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
⌅ [df47a6cb] RData v0.8.3
  [ce6b1742] RDatasets v0.7.7
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
⌅ [79098fc4] Rmath v0.7.1
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.43
  [6c6a2e73] Scratch v1.2.1
  [91c51154] SentinelArrays v1.4.8
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  [a2af1166] SortingAlgorithms v1.2.1
⌅ [276daf66] SpecialFunctions v1.8.8
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  [0d7ed370] StaticArrayInterface v1.8.0
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⌅ [2913bbd2] StatsBase v0.33.21
⌅ [4c63d2b9] StatsFuns v0.9.18
⌅ [3eaba693] StatsModels v0.6.33
  [892a3eda] StringManipulation v0.4.1
  [fd094767] Suppressor v0.2.8
  [dc5dba14] TZJData v1.4.0+2025a
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [8290d209] ThreadingUtilities v0.5.2
  [f269a46b] TimeZones v1.21.2
  [dec3038e] TraitSimulation v0.1.2
⌅ [3bb67fe8] TranscodingStreams v0.9.13
  [3a884ed6] UnPack v1.0.2
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  [28eba6e3] VariantCallFormat v0.5.6
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  [ea10d353] WeakRefStrings v1.4.2
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  [ae81ac8f] ASL_jll v0.1.3+0
  [6e34b625] Bzip2_jll v1.0.9+0
⌅ [9cc047cb] Ipopt_jll v3.13.4+2
  [d00139f3] METIS_jll v5.1.3+0
⌅ [d7ed1dd3] MUMPS_seq_jll v5.2.1+4
  [079eb43e] NLopt_jll v2.10.0+0
⌅ [656ef2d0] OpenBLAS32_jll v0.3.24+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
⌅ [f50d1b31] Rmath_jll v0.4.3+0
  [ffd25f8a] XZ_jll v5.6.4+1
  [3161d3a3] Zstd_jll v1.5.7+1
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
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  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
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  [56ddb016] Logging
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        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Test Summary:   | Pass  Total   Time
modelparameters |  430    430  26.3s
WARNING: Method definition generateSPDmatrix(Any) in module Main at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/modelparameters.jl:6 overwritten at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/simulationmodels.jl:12.
WARNING: Method definition generateRandomVCM(Int64, Int64, Int64, Int64) in module Main at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/modelparameters.jl:13 overwritten at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/simulationmodels.jl:19.
WARNING: Method definition generateSPDmatrix(Any) in module Main at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/simulationmodels.jl:12 overwritten at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/matrixnormalsimulation.jl:10.
WARNING: Method definition generateRandomVCM(Int64, Int64, Int64, Int64) in module Main at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/simulationmodels.jl:19 overwritten at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/matrixnormalsimulation.jl:17.
Test Summary:    | Pass  Total     Time
simulationmodels |   62     62  1m38.4s
  5.177559 seconds (1.41 M allocations: 98.562 MiB, 9.36% gc time, 99.36% compilation time)

******************************************************************************
This program contains Ipopt, a library for large-scale nonlinear optimization.
 Ipopt is released as open source code under the Eclipse Public License (EPL).
         For more information visit https://github.com/coin-or/Ipopt
******************************************************************************

simulatepower: Error During Test at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/runtests.jl:22
  Got exception outside of a @test
  LoadError: ArgumentError: matrix contains Infs or NaNs
  Stacktrace:
    [1] chkuplofinite(A::Matrix{Float64}, uplo::Char)
      @ LinearAlgebra.LAPACK /opt/julia/share/julia/stdlib/v1.10/LinearAlgebra/src/lapack.jl:98
    [2] syevr!(jobz::Char, range::Char, uplo::Char, A::Matrix{Float64}, vl::Float64, vu::Float64, il::Int64, iu::Int64, abstol::Float64)
      @ LinearAlgebra.LAPACK /opt/julia/share/julia/stdlib/v1.10/LinearAlgebra/src/lapack.jl:5222
    [3] eigen!
      @ /opt/julia/share/julia/stdlib/v1.10/LinearAlgebra/src/symmetriceigen.jl:8 [inlined]
    [4] polrtest(d::OrdinalMultinomialScoreTest{Int64, Float64, LogitLink})
      @ OrdinalMultinomialModels ~/.julia/packages/OrdinalMultinomialModels/gxGhZ/src/ordmntest.jl:94
    [5] power_simulation(nsim::Int64, γs::Vector{Float64}, traitobject::OrderedMultinomialTrait{Matrix{Float64}, Vector{Float64}, Vector{Float64}, LogitLink}, randomseed::Int64)
      @ TraitSimulation ~/.julia/packages/TraitSimulation/gba7q/src/simulatepower.jl:167
    [6] top-level scope
      @ ~/.julia/packages/TraitSimulation/gba7q/test/univariate_power.jl:29
    [7] include(fname::String)
      @ Base.MainInclude ./client.jl:494
    [8] macro expansion
      @ ~/.julia/packages/TraitSimulation/gba7q/test/runtests.jl:24 [inlined]
    [9] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
   [10] top-level scope
      @ ~/.julia/packages/TraitSimulation/gba7q/test/runtests.jl:23
   [11] include(fname::String)
      @ Base.MainInclude ./client.jl:494
   [12] top-level scope
      @ none:6
   [13] eval
      @ ./boot.jl:385 [inlined]
   [14] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:296
   [15] _start()
      @ Base ./client.jl:557
  in expression starting at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/univariate_power.jl:29
Test Summary: | Pass  Error  Total     Time
simulatepower |    3      1      4  2m57.0s
ERROR: LoadError: Some tests did not pass: 3 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/TraitSimulation/gba7q/test/runtests.jl:22

Testing failed after 323.85s

ERROR: LoadError: Package TraitSimulation errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 802.79s: package tests unexpectedly errored