Package evaluation of StochasticIntegrators on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T14:35:19.774


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.08s


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# Installation
#

Installing StochasticIntegrators...
   Resolving package versions...
   Installed FastTransforms ─ v0.17.0
   Installed HDF5 ─────────── v0.16.16
    Updating `~/.julia/environments/v1.10/Project.toml`
  [62159e39] + StochasticIntegrators v0.2.0
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [a4c015fc] + ANSIColoredPrinters v0.0.1
  [621f4979] + AbstractFFTs v1.5.0
  [79e6a3ab] + Adapt v4.2.0
⌅ [4c88cf16] + Aqua v0.5.6
  [4fba245c] + ArrayInterface v7.18.0
  [4c555306] + ArrayLayouts v1.11.1
  [aae01518] + BandedMatrices v1.9.1
  [8e7c35d0] + BlockArrays v1.4.0
  [bbf7d656] + CommonSubexpressions v0.3.1
  [a09551c4] + CompactBasisFunctions v0.2.14
  [34da2185] + Compat v4.16.0
  [b152e2b5] + CompositeTypes v0.1.4
  [187b0558] + ConstructionBase v1.5.8
  [7ae1f121] + ContinuumArrays v0.19.2
  [a8cc5b0e] + Crayons v4.1.1
⌃ [717857b8] + DSP v0.7.10
  [9a962f9c] + DataAPI v1.16.0
  [e2d170a0] + DataValueInterfaces v1.0.0
  [55939f99] + DecFP v1.4.1
  [8bb1440f] + DelimitedFiles v1.9.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.3
⌅ [e30172f5] + Documenter v0.27.25
  [5b8099bc] + DomainSets v0.7.15
  [7a1cc6ca] + FFTW v1.8.1
  [442a2c76] + FastGaussQuadrature v1.0.2
  [057dd010] + FastTransforms v0.17.0
  [1a297f60] + FillArrays v1.13.0
  [6a86dc24] + FiniteDiff v2.27.0
  [f6369f11] + ForwardDiff v0.10.38
  [a8297547] + GenericFFT v0.1.6
  [14197337] + GenericLinearAlgebra v0.3.15
⌅ [9a0b12b7] + GeometricBase v0.2.6
⌅ [c85262ba] + GeometricEquations v0.2.1
⌅ [dcce2d33] + GeometricIntegrators v0.9.2
⌅ [f67ccb44] + HDF5 v0.16.16
  [b5f81e59] + IOCapture v0.2.5
  [4858937d] + InfiniteArrays v0.15.5
  [e1ba4f0e] + Infinities v0.1.11
  [8197267c] + IntervalSets v0.7.10
  [92d709cd] + IrrationalConstants v0.2.4
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [682c06a0] + JSON v0.21.4
  [b964fa9f] + LaTeXStrings v1.4.0
  [5078a376] + LazyArrays v2.6.0
  [d3d80556] + LineSearches v7.3.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [3da0fdf6] + MPIPreferences v0.1.11
  [1914dd2f] + MacroTools v0.5.15
  [d41bc354] + NLSolversBase v7.8.3
  [2774e3e8] + NLsolve v4.5.1
  [77ba4419] + NaNMath v1.1.2
  [6fe1bfb0] + OffsetArrays v1.15.0
  [bac558e1] + OrderedCollections v1.8.0
  [d96e819e] + Parameters v0.12.3
  [69de0a69] + Parsers v2.8.1
⌅ [f27b6e38] + Polynomials v3.2.13
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [92933f4c] + ProgressMeter v1.10.2
  [a08977f5] + QuadratureRules v0.1.6
  [c4ea9172] + QuasiArrays v0.12.0
  [3cdcf5f2] + RecipesBase v1.3.4
  [807425ed] + RecurrenceRelationships v0.2.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
⌅ [fb486d5c] + RungeKutta v0.3.8
  [efcf1570] + Setfield v1.1.1
⌅ [36b790f5] + SimpleSolvers v0.2.4
  [276daf66] + SpecialFunctions v2.5.0
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [82ae8749] + StatsAPI v1.7.0
  [62159e39] + StochasticIntegrators v0.2.0
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [c751599d] + ToeplitzMatrices v0.8.5
  [3a884ed6] + UnPack v1.0.2
  [47200ebd] + DecFP_jll v2.0.3+1
  [f5851436] + FFTW_jll v3.3.10+3
  [34b6f7d7] + FastTransforms_jll v0.6.3+0
  [0234f1f7] + HDF5_jll v1.14.5+0
  [e33a78d0] + Hwloc_jll v2.12.0+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0
  [1d63c593] + LLVMOpenMP_jll v18.1.7+0
  [856f044c] + MKL_jll v2025.0.1+1
  [7cb0a576] + MPICH_jll v4.3.0+0
  [f1f71cc9] + MPItrampoline_jll v5.5.2+0
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  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
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  [37e2e46d] + LinearAlgebra
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        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`
    Building HDF5 ──────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/114e20044677badbc631ee6fdc80a67920561a29/build.log`
    Building FastTransforms → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b41969ccec1379b33967c9b720a250d4687cfc2d/build.log`

Installation completed after 18.21s


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# Precompilation
#

Precompiling PkgEval dependencies...

┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.9/activate_set.jl:63
Precompiling package dependencies...
┌ Warning: Circular dependency detected.
│ Precompilation will be skipped for dependencies in this cycle:
│  ┌ Distributions → DistributionsChainRulesCoreExt
│  └─ Distributions → DistributionsTestExt
│ Precompilation will also be skipped for the following, which depend on the above cycle:
│   Latexify → ParameterizedFunctionsExt
│   ModelingToolkit
│   DiffEqJump
│   GeometricProblems
│   DiffEqCallbacks
│   Symbolics
│   DiffEqBase
└ @ Pkg.API.Precompilation /opt/julia/share/julia/stdlib/v1.10/Pkg/src/precompilation.jl:583

Precompilation completed after 685.25s


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# Testing
#

     Testing StochasticIntegrators
┌ Warning: Could not use exact versions of packages in manifest, re-resolving
└ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1829
      Status `/tmp/jl_pNigBv/Project.toml`
⌅ [9a0b12b7] GeometricBase v0.2.6
⌅ [c85262ba] GeometricEquations v0.2.1
⌅ [dcce2d33] GeometricIntegrators v0.9.2
⌃ [18cb22b4] GeometricProblems v0.2.2
⌅ [f67ccb44] HDF5 v0.16.16
  [6fe1bfb0] OffsetArrays v1.15.0
  [d96e819e] Parameters v0.12.3
  [189a3867] Reexport v1.2.2
⌅ [fb486d5c] RungeKutta v0.3.8
⌅ [1bc83da4] SafeTestsets v0.0.1
⌅ [36b790f5] SimpleSolvers v0.2.4
  [62159e39] StochasticIntegrators v0.2.0
  [37e2e46d] LinearAlgebra
  [9a3f8284] Random
  [8dfed614] Test
      Status `/tmp/jl_pNigBv/Manifest.toml`
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  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [781609d7] GMP_jll v6.2.1+6
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [3a97d323] MPFR_jll v4.2.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [05823500] OpenLibm_jll v0.8.1+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation.
WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52.
WARNING: Wrapping `Vararg` directly in UnionAll is deprecated (wrap the tuple instead).
You may need to write `f(x::Vararg{T})` rather than `f(x::Vararg{<:T})` or `f(x::Vararg{T}) where T` instead of `f(x::Vararg{T} where T)`.
┌ Warning: Module DomainSets with build ID ffffffff-ffff-ffff-0019-83a57deb8863 is missing from the cache.
│ This may mean DomainSets [5b8099bc-c8ec-5219-889f-1d9e522a28bf] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:2018
┌ Warning: Module CompactBasisFunctions with build ID ffffffff-ffff-ffff-0019-83a3bb55fa71 is missing from the cache.
│ This may mean CompactBasisFunctions [a09551c4-f815-4143-809e-dd1986753ba7] does not support precompilation but is imported by a module that does.
└ @ Base loading.jl:2018
Atomic Solutions                                                                : Error During Test at /home/pkgeval/.julia/packages/SafeTestsets/A83XK/src/SafeTestsets.jl:25
  Got exception outside of a @test
  LoadError: TypeError: in Type{...} expression, expected UnionAll, got Type{SimpleSolvers.NonlinearSolver}
  Stacktrace:
    [1] top-level scope
      @ ~/.julia/packages/GeometricIntegrators/Yo3w3/src/integrators/rk/integrators_firk.jl:65
    [2] include(mod::Module, _path::String)
      @ Base ./Base.jl:495
    [3] include(x::String)
      @ GeometricIntegrators.Integrators ~/.julia/packages/GeometricIntegrators/Yo3w3/src/Integrators.jl:1
    [4] top-level scope
      @ ~/.julia/packages/GeometricIntegrators/Yo3w3/src/Integrators.jl:89
    [5] include(mod::Module, _path::String)
      @ Base ./Base.jl:495
    [6] include(x::String)
      @ GeometricIntegrators ~/.julia/packages/GeometricIntegrators/Yo3w3/src/GeometricIntegrators.jl:1
    [7] top-level scope
      @ ~/.julia/packages/GeometricIntegrators/Yo3w3/src/GeometricIntegrators.jl:15
    [8] include(mod::Module, _path::String)
      @ Base ./Base.jl:495
    [9] _require(pkg::Base.PkgId, env::String)
      @ Base ./loading.jl:2084
   [10] __require_prelocked(uuidkey::Base.PkgId, env::String)
      @ Base ./loading.jl:1882
   [11] #invoke_in_world#3
      @ ./essentials.jl:926 [inlined]
   [12] invoke_in_world
      @ ./essentials.jl:923 [inlined]
   [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
      @ Base ./loading.jl:1873
   [14] macro expansion
      @ ./loading.jl:1860 [inlined]
   [15] macro expansion
      @ ./lock.jl:267 [inlined]
   [16] __require(into::Module, mod::Symbol)
      @ Base ./loading.jl:1823
   [17] #invoke_in_world#3
      @ ./essentials.jl:926 [inlined]
   [18] invoke_in_world
      @ ./essentials.jl:923 [inlined]
   [19] require(into::Module, mod::Symbol)
      @ Base ./loading.jl:1816
   [20] include(mod::Module, _path::String)
      @ Base ./Base.jl:495
   [21] _require(pkg::Base.PkgId, env::String)
      @ Base ./loading.jl:2084
   [22] __require_prelocked(uuidkey::Base.PkgId, env::String)
      @ Base ./loading.jl:1882
   [23] #invoke_in_world#3
      @ ./essentials.jl:926 [inlined]
   [24] invoke_in_world
      @ ./essentials.jl:923 [inlined]
   [25] _require_prelocked(uuidkey::Base.PkgId, env::String)
      @ Base ./loading.jl:1873
   [26] macro expansion
      @ ./loading.jl:1860 [inlined]
   [27] macro expansion
      @ ./lock.jl:267 [inlined]
   [28] __require(into::Module, mod::Symbol)
      @ Base ./loading.jl:1823
   [29] #invoke_in_world#3
      @ ./essentials.jl:926 [inlined]
   [30] invoke_in_world
      @ ./essentials.jl:923 [inlined]
   [31] require(into::Module, mod::Symbol)
      @ Base ./loading.jl:1816
   [32] include(mod::Module, _path::String)
      @ Base ./Base.jl:495
   [33] include(x::String)
      @ Main.var"##225" ~/.julia/packages/SafeTestsets/A83XK/src/SafeTestsets.jl:23
   [34] macro expansion
      @ ~/.julia/packages/StochasticIntegrators/wYX67/test/runtests.jl:3 [inlined]
   [35] macro expansion
      @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined]
   [36] macro expansion
      @ ~/.julia/packages/StochasticIntegrators/wYX67/test/runtests.jl:3 [inlined]
   [37] top-level scope
      @ ~/.julia/packages/SafeTestsets/A83XK/src/SafeTestsets.jl:25
   [38] eval(m::Module, e::Any)
      @ Core ./boot.jl:385
   [39] top-level scope
      @ ~/.julia/packages/StochasticIntegrators/wYX67/test/runtests.jl:23
   [40] include(fname::String)
      @ Base.MainInclude ./client.jl:494
   [41] top-level scope
      @ none:6
   [42] eval
      @ ./boot.jl:385 [inlined]
   [43] exec_options(opts::Base.JLOptions)
      @ Base ./client.jl:296
   [44] _start()
      @ Base ./client.jl:557
  in expression starting at /home/pkgeval/.julia/packages/GeometricIntegrators/Yo3w3/src/integrators/rk/integrators_firk.jl:65
  in expression starting at /home/pkgeval/.julia/packages/GeometricIntegrators/Yo3w3/src/Integrators.jl:1
  in expression starting at /home/pkgeval/.julia/packages/GeometricIntegrators/Yo3w3/src/GeometricIntegrators.jl:1
  in expression starting at /home/pkgeval/.julia/packages/StochasticIntegrators/wYX67/src/StochasticIntegrators.jl:1
  in expression starting at /home/pkgeval/.julia/packages/StochasticIntegrators/wYX67/test/atomic_solutions_tests.jl:2
Test Summary:                                                                    | Error  Total     Time
Atomic Solutions                                                                 |     1      1  1m55.0s
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/StochasticIntegrators/wYX67/test/runtests.jl:3

Testing failed after 124.44s

ERROR: LoadError: Package StochasticIntegrators errored during testing
Stacktrace:
 [1] pkgerror(msg::String)
   @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70
 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
   @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034
 [3] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined]
 [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444
 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd})
   @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159
 [6] test
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined]
 [7] #test#74
   @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined]
 [8] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:219
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 893.55s: illegal method overwrites during precompilation