Package evaluation of StateSpaceRoutines on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T10:11:32.952 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.04s ################################################################################ # Installation # Installing StateSpaceRoutines... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [261fd431] + StateSpaceRoutines v0.4.3 Updating `~/.julia/environments/v1.10/Manifest.toml` [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [a9b6321e] + Atomix v1.1.0 [d360d2e6] + ChainRulesCore v1.25.1 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [aaf54ef3] + DistributedArrays v0.6.7 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [1a297f60] + FillArrays v1.13.0 [f6369f11] + ForwardDiff v0.10.38 [d9f16b24] + Functors v0.5.2 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.27 [18e54dd8] + IntegerMathUtils v0.1.2 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [872c559c] + NNlib v0.9.27 [77ba4419] + NaNMath v1.1.2 [3bd65402] + Optimisers v0.4.5 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.6 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [79098fc4] + Rmath v0.8.0 ⌅ [f2b01f46] + Roots v1.4.1 ⌅ [efcf1570] + Setfield v0.8.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [261fd431] + StateSpaceRoutines v0.4.3 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [9f7883ad] + Tracker v0.2.37 [013be700] + UnsafeAtomics v0.3.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.1+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 8.74s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 19.62s ################################################################################ # Testing # Testing StateSpaceRoutines Status `/tmp/jl_FayEzE/Project.toml` [6e4b80f9] BenchmarkTools v1.6.0 [aaf54ef3] DistributedArrays v0.6.7 [31c24e10] Distributions v0.25.117 [5789e2e9] FileIO v1.16.6 [f67ccb44] HDF5 v0.17.2 [4138dd39] JLD v0.13.5 [033835bb] JLD2 v0.5.11 [90014a1f] PDMats v0.11.32 ⌅ [f2b01f46] Roots v1.4.1 [261fd431] StateSpaceRoutines v0.4.3 [9f7883ad] Tracker v0.2.37 [8ba89e20] Distributed [37e2e46d] LinearAlgebra [9a3f8284] Random [1a1011a3] SharedArrays [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [8dfed614] Test Status `/tmp/jl_FayEzE/Manifest.toml` [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [a9b6321e] Atomix v1.1.0 [6e4b80f9] BenchmarkTools v1.6.0 [a74b3585] Blosc v0.7.3 [d360d2e6] ChainRulesCore v1.25.1 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [aaf54ef3] DistributedArrays v0.6.7 [31c24e10] Distributions v0.25.117 [ffbed154] DocStringExtensions v0.9.3 [5789e2e9] FileIO v1.16.6 [1a297f60] FillArrays v1.13.0 [f6369f11] ForwardDiff v0.10.38 [d9f16b24] Functors v0.5.2 [46192b85] GPUArraysCore v0.2.0 [c8ec2601] H5Zblosc v0.1.2 [f67ccb44] HDF5 v0.17.2 [34004b35] HypergeometricFunctions v0.3.27 [18e54dd8] IntegerMathUtils v0.1.2 [92d709cd] IrrationalConstants v0.2.4 [4138dd39] JLD v0.13.5 [033835bb] JLD2 v0.5.11 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.34 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [872c559c] NNlib v0.9.27 [77ba4419] NaNMath v1.1.2 [3bd65402] Optimisers v0.4.5 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.32 [69de0a69] Parsers v2.8.1 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.6 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [79098fc4] Rmath v0.8.0 ⌅ [f2b01f46] Roots v1.4.1 ⌅ [efcf1570] Setfield v0.8.2 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [261fd431] StateSpaceRoutines v0.4.3 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.3.2 [9f7883ad] Tracker v0.2.37 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.0 [0b7ba130] Blosc_jll v1.21.6+2 [0234f1f7] HDF5_jll v1.14.5+0 [e33a78d0] Hwloc_jll v2.12.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.0+0 [f1f71cc9] MPItrampoline_jll v5.5.2+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [9abbd945] Profile [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [1a1011a3] SharedArrays [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.1+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time kalman_filter.jl | 26 26 1m09.7s Test Summary: | Pass Total Time chand_recursion.jl | 12 12 1.5s WARNING: using JLD.@load in module Main conflicts with an existing identifier. ┌ Warning: the following fields are present in type PDMat{Float64, Matrix{Float64}} saved in the file but not present in the type in the workspace: │ │ dim, │ │ Data in these fields will not be accessible └ @ JLD2 ~/.julia/packages/JLD2/nPYlZ/src/data/reconstructing_datatypes.jl:237 ┌ Warning: `MvNormal(σ::AbstractVector{<:Real})` is deprecated, use `MvNormal(LinearAlgebra.Diagonal(map(abs2, σ)))` instead. │ caller = ip:0x0 └ @ Core :-1 Mutation Tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 Expression: s_t_nontemp[1] ≈ (test_file_outputs["s_t_nontemp_mutation"])[1] Evaluated: -4.848189271926299 ≈ -4.984343110376641 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:672 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 Mutation Tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:73 Expression: ϵ_t[1] ≈ (test_file_outputs["eps_t_mutation"])[1] Evaluated: 0.1822008815715733 ≈ 0.1950520731790098 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:672 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:73 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:72 TPF tests: Test Failed at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 Expression: out_no_parallel[1] ≈ out_parallel_one_worker[1] Evaluated: -304.0513258041208 ≈ -307.81103946674784 Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:672 [inlined] [2] macro expansion @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 [inlined] [3] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [4] top-level scope @ ~/.julia/packages/StateSpaceRoutines/MzGQi/test/tempered_particle_filter.jl:82 Test Summary: | Pass Fail Total Time tempered_particle_filter.jl | 8 3 11 2m01.9s Corection and Auxiliary Tests | 5 5 0.0s Selection Tests | 3 3 0.0s Mutation Tests | 2 2 3.1s TPF tests | 1 1 0.0s ERROR: LoadError: Some tests did not pass: 8 passed, 3 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/StateSpaceRoutines/MzGQi/test/runtests.jl:13 Testing failed after 300.24s ERROR: LoadError: Package StateSpaceRoutines errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 342.77s: package has test failures