Package evaluation of SampleChainsDynamicHMC on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T14:17:00.458


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.22s


################################################################################
# Installation
#

Installing SampleChainsDynamicHMC...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [6d9fd711] + SampleChainsDynamicHMC v0.3.5
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.41
  [79e6a3ab] + Adapt v4.2.0
  [dce04be8] + ArgCheck v2.4.0
⌅ [4c555306] + ArrayLayouts v0.8.19
⌅ [65a8f2f4] + ArraysOfArrays v0.5.0
⌅ [198e06fe] + BangBang v0.3.40
  [49dc2e85] + Calculus v0.5.2
  [d360d2e6] + ChainRulesCore v1.25.1
  [9e997f8a] + ChangesOfVariables v0.1.9
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [2569d6c7] + ConcreteStructs v0.2.3
  [187b0558] + ConstructionBase v1.5.8
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [ffbed154] + DocStringExtensions v0.9.3
⌃ [bbc10e6e] + DynamicHMC v3.3.0
  [fdbdab4c] + ElasticArrays v1.2.12
⌅ [1a297f60] + FillArrays v0.13.11
  [f6369f11] + ForwardDiff v0.10.38
⌅ [46192b85] + GPUArraysCore v0.1.6
  [6b9d7cbe] + GeneralizedGenerated v0.3.3
  [615f187c] + IfElse v0.1.1
  [22cec73e] + InitialValues v0.3.1
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [b14d175d] + JuliaVariables v0.2.4
⌅ [5078a376] + LazyArrays v0.22.18
  [1fad7336] + LazyStack v0.1.3
⌅ [6fdf6af0] + LogDensityProblems v0.11.5
  [2ab3a3ac] + LogExpFunctions v0.3.29
⌅ [6e857e4b] + MCMCDiagnostics v0.3.0
  [d8e11817] + MLStyle v0.4.17
  [1914dd2f] + MacroTools v0.5.15
  [dbb5928d] + MappedArrays v0.4.2
⌅ [a3b82374] + MatrixFactorizations v0.9.6
  [eff96d63] + Measurements v2.12.0
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.2
  [71a1bf82] + NameResolution v0.1.5
  [d9ec5142] + NamedTupleTools v0.14.3
⌃ [a734d2a7] + NestedTuples v0.3.10
  [bac558e1] + OrderedCollections v1.8.0
  [65ce6f38] + PackageExtensionCompat v1.0.2
  [d96e819e] + Parameters v0.12.3
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [8162dcfd] + PrettyPrint v0.2.0
  [92933f4c] + ProgressMeter v1.10.2
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [754583d1] + SampleChains v0.5.1
  [6d9fd711] + SampleChainsDynamicHMC v0.3.5
  [efcf1570] + Setfield v1.1.1
  [a2af1166] + SortingAlgorithms v1.2.1
  [276daf66] + SpecialFunctions v2.5.0
⌅ [aedffcd0] + Static v0.6.6
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [82ae8749] + StatsAPI v1.7.0
⌅ [2913bbd2] + StatsBase v0.33.21
  [5e0ebb24] + Strided v2.2.0
  [4db3bf67] + StridedViews v0.3.2
⌅ [09ab397b] + StructArrays v0.6.18
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [02d47bb6] + TensorCast v0.4.8
⌅ [84d833dd] + TransformVariables v0.6.4
  [24ddb15e] + TransmuteDims v0.1.16
  [9d95972d] + TupleTools v1.6.0
⌅ [615932cf] + TupleVectors v0.1.5
  [3a884ed6] + UnPack v1.0.2
  [c4a57d5a] + UnsafeArrays v1.0.6
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [0dad84c5] + ArgTools v1.1.1
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 9.14s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 109.29s


################################################################################
# Testing
#

     Testing SampleChainsDynamicHMC
      Status `/tmp/jl_RTzH2y/Project.toml`
  [2569d6c7] ConcreteStructs v0.2.3
⌃ [bbc10e6e] DynamicHMC v3.3.0
  [fdbdab4c] ElasticArrays v1.2.12
⌅ [6fdf6af0] LogDensityProblems v0.11.5
  [dbb5928d] MappedArrays v0.4.2
⌃ [a734d2a7] NestedTuples v0.3.10
  [189a3867] Reexport v1.2.2
  [37e2e3b7] ReverseDiff v1.15.3
  [754583d1] SampleChains v0.5.1
  [6d9fd711] SampleChainsDynamicHMC v0.3.5
⌅ [09ab397b] StructArrays v0.6.18
⌅ [84d833dd] TransformVariables v0.6.4
⌅ [615932cf] TupleVectors v0.1.5
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [9a3f8284] Random
  [8dfed614] Test
      Status `/tmp/jl_RTzH2y/Manifest.toml`
  [7d9f7c33] Accessors v0.1.41
  [79e6a3ab] Adapt v4.2.0
  [dce04be8] ArgCheck v2.4.0
⌅ [4c555306] ArrayLayouts v0.8.19
⌅ [65a8f2f4] ArraysOfArrays v0.5.0
⌅ [198e06fe] BangBang v0.3.40
  [49dc2e85] Calculus v0.5.2
  [d360d2e6] ChainRulesCore v1.25.1
  [9e997f8a] ChangesOfVariables v0.1.9
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.8
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [ffbed154] DocStringExtensions v0.9.3
⌃ [bbc10e6e] DynamicHMC v3.3.0
  [fdbdab4c] ElasticArrays v1.2.12
⌅ [1a297f60] FillArrays v0.13.11
  [f6369f11] ForwardDiff v0.10.38
  [069b7b12] FunctionWrappers v1.1.3
⌅ [46192b85] GPUArraysCore v0.1.6
  [6b9d7cbe] GeneralizedGenerated v0.3.3
  [615f187c] IfElse v0.1.1
  [22cec73e] InitialValues v0.3.1
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [b14d175d] JuliaVariables v0.2.4
⌅ [5078a376] LazyArrays v0.22.18
  [1fad7336] LazyStack v0.1.3
⌅ [6fdf6af0] LogDensityProblems v0.11.5
  [2ab3a3ac] LogExpFunctions v0.3.29
⌅ [6e857e4b] MCMCDiagnostics v0.3.0
  [d8e11817] MLStyle v0.4.17
  [1914dd2f] MacroTools v0.5.15
  [dbb5928d] MappedArrays v0.4.2
⌅ [a3b82374] MatrixFactorizations v0.9.6
  [eff96d63] Measurements v2.12.0
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.2
  [71a1bf82] NameResolution v0.1.5
  [d9ec5142] NamedTupleTools v0.14.3
⌃ [a734d2a7] NestedTuples v0.3.10
  [bac558e1] OrderedCollections v1.8.0
  [65ce6f38] PackageExtensionCompat v1.0.2
  [d96e819e] Parameters v0.12.3
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [8162dcfd] PrettyPrint v0.2.0
  [92933f4c] ProgressMeter v1.10.2
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [37e2e3b7] ReverseDiff v1.15.3
  [754583d1] SampleChains v0.5.1
  [6d9fd711] SampleChainsDynamicHMC v0.3.5
  [efcf1570] Setfield v1.1.1
  [a2af1166] SortingAlgorithms v1.2.1
  [276daf66] SpecialFunctions v2.5.0
⌅ [aedffcd0] Static v0.6.6
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [82ae8749] StatsAPI v1.7.0
⌅ [2913bbd2] StatsBase v0.33.21
  [5e0ebb24] Strided v2.2.0
  [4db3bf67] StridedViews v0.3.2
⌅ [09ab397b] StructArrays v0.6.18
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [02d47bb6] TensorCast v0.4.8
⌅ [84d833dd] TransformVariables v0.6.4
  [24ddb15e] TransmuteDims v0.1.16
  [9d95972d] TupleTools v1.6.0
⌅ [615932cf] TupleVectors v0.1.5
  [3a884ed6] UnPack v1.0.2
  [c4a57d5a] UnsafeArrays v1.0.6
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions v1.2.0
  [44cfe95a] Pkg v1.10.0
  [de0858da] Printf
  [3fa0cd96] REPL
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [05823500] OpenLibm_jll v0.8.1+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
┌ Info: found initial stepsize
└   ϵ = 0.258
┌ Info: Starting MCMC
│   total_steps = 75
└   tuning = "stepsize"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 4.2e-5
│   estimated_seconds_left = 0.0031
└   ϵ = 0.258
┌ Info: Starting MCMC
│   total_steps = 25
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 4.2e-5
│   estimated_seconds_left = 0.001
└   ϵ = 0.231
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [1.625323005467725, 0.8760835355062648]
┌ Info: Starting MCMC
│   total_steps = 50
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 0.00014
│   estimated_seconds_left = 0.0068
└   ϵ = 0.19
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [1.0944441549749477, 0.9463991529903644]
┌ Info: Starting MCMC
│   total_steps = 100
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 4.0e-5
│   estimated_seconds_left = 0.004
└   ϵ = 0.201
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [1.2142690825311788, 0.9514163344724056]
┌ Info: Starting MCMC
│   total_steps = 200
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 4.5e-5
│   estimated_seconds_left = 0.009
└   ϵ = 0.219
┌ Info: MCMC progress
│   step = 101
│   seconds_per_step = 0.00012
│   estimated_seconds_left = 0.012
└   ϵ = 0.0802
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [0.6316417750470789, 0.8618059743642182]
┌ Info: Starting MCMC
│   total_steps = 400
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 7.3e-5
│   estimated_seconds_left = 0.029
└   ϵ = 0.162
┌ Info: MCMC progress
│   step = 101
│   seconds_per_step = 8.3e-5
│   estimated_seconds_left = 0.025
└   ϵ = 0.308
┌ Info: MCMC progress
│   step = 201
│   seconds_per_step = 8.1e-5
│   estimated_seconds_left = 0.016
└   ϵ = 0.487
┌ Info: MCMC progress
│   step = 301
│   seconds_per_step = 0.00011
│   estimated_seconds_left = 0.011
└   ϵ = 0.34
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [1.3379133905271552, 1.0509795424274078]
┌ Info: Starting MCMC
│   total_steps = 800
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 2.3e-5
│   estimated_seconds_left = 0.019
└   ϵ = 0.298
┌ Info: MCMC progress
│   step = 101
│   seconds_per_step = 9.1e-5
│   estimated_seconds_left = 0.064
└   ϵ = 0.122
┌ Info: MCMC progress
│   step = 201
│   seconds_per_step = 9.0e-5
│   estimated_seconds_left = 0.054
└   ϵ = 0.181
┌ Info: MCMC progress
│   step = 301
│   seconds_per_step = 0.00022
│   estimated_seconds_left = 0.11
└   ϵ = 0.299
┌ Info: MCMC progress
│   step = 401
│   seconds_per_step = 0.00011
│   estimated_seconds_left = 0.043
└   ϵ = 0.0386
┌ Info: MCMC progress
│   step = 501
│   seconds_per_step = 0.00011
│   estimated_seconds_left = 0.033
└   ϵ = 0.17
┌ Info: MCMC progress
│   step = 601
│   seconds_per_step = 6.8e-5
│   estimated_seconds_left = 0.013
└   ϵ = 0.102
┌ Info: MCMC progress
│   step = 701
│   seconds_per_step = 7.3e-5
│   estimated_seconds_left = 0.0072
└   ϵ = 0.239
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [1.0332736818460089, 0.8416644118157801]
┌ Info: Starting MCMC
│   total_steps = 1600
└   tuning = "stepsize and Symmetric metric"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 8.2e-5
│   estimated_seconds_left = 0.13
└   ϵ = 0.218
┌ Info: MCMC progress
│   step = 101
│   seconds_per_step = 9.1e-5
│   estimated_seconds_left = 0.14
└   ϵ = 0.028
┌ Info: MCMC progress
│   step = 201
│   seconds_per_step = 0.00014
│   estimated_seconds_left = 0.2
└   ϵ = 0.12
┌ Info: MCMC progress
│   step = 301
│   seconds_per_step = 0.00019
│   estimated_seconds_left = 0.25
└   ϵ = 0.194
┌ Info: MCMC progress
│   step = 401
│   seconds_per_step = 7.7e-5
│   estimated_seconds_left = 0.092
└   ϵ = 0.149
┌ Info: MCMC progress
│   step = 501
│   seconds_per_step = 0.00022
│   estimated_seconds_left = 0.24
└   ϵ = 0.157
┌ Info: MCMC progress
│   step = 601
│   seconds_per_step = 8.1e-5
│   estimated_seconds_left = 0.081
└   ϵ = 0.243
┌ Info: MCMC progress
│   step = 701
│   seconds_per_step = 8.7e-5
│   estimated_seconds_left = 0.078
└   ϵ = 0.0876
┌ Info: MCMC progress
│   step = 801
│   seconds_per_step = 7.9e-5
│   estimated_seconds_left = 0.063
└   ϵ = 0.274
┌ Info: MCMC progress
│   step = 901
│   seconds_per_step = 5.8e-5
│   estimated_seconds_left = 0.041
└   ϵ = 0.185
┌ Info: MCMC progress
│   step = 1001
│   seconds_per_step = 0.00011
│   estimated_seconds_left = 0.068
└   ϵ = 0.242
┌ Info: MCMC progress
│   step = 1101
│   seconds_per_step = 0.0001
│   estimated_seconds_left = 0.051
└   ϵ = 0.164
┌ Info: MCMC progress
│   step = 1201
│   seconds_per_step = 0.0002
│   estimated_seconds_left = 0.081
└   ϵ = 0.235
┌ Info: MCMC progress
│   step = 1301
│   seconds_per_step = 6.9e-5
│   estimated_seconds_left = 0.021
└   ϵ = 0.277
┌ Info: MCMC progress
│   step = 1401
│   seconds_per_step = 8.5e-5
│   estimated_seconds_left = 0.017
└   ϵ = 0.186
┌ Info: MCMC progress
│   step = 1501
│   seconds_per_step = 0.00013
│   estimated_seconds_left = 0.013
└   ϵ = 0.278
┌ Info: adaptation finished
└   adapted_kinetic_energy = Gaussian kinetic energy (Symmetric), √diag(M⁻¹): [0.791379726919712, 1.016304491411812]
┌ Info: Starting MCMC
│   total_steps = 50
└   tuning = "stepsize"
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 2.2e-5
│   estimated_seconds_left = 0.0011
└   ϵ = 0.208
┌ Info: Starting MCMC
└   total_steps = 0
┌ Info: Starting MCMC
└   total_steps = 9
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 9.0e-5
└   estimated_seconds_left = 0.00072
┌ Info: Starting MCMC
└   total_steps = 90
┌ Info: MCMC progress
│   step = 1
│   seconds_per_step = 1.9e-5
└   estimated_seconds_left = 0.0017
Test Summary:             | Pass  Total     Time
SampleChainsDynamicHMC.jl |   16     16  1m15.3s
     Testing SampleChainsDynamicHMC tests passed 

Testing completed after 88.4s

PkgEval succeeded after 217.96s