Package evaluation of PkgCite on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T08:52:40.021 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.27s ################################################################################ # Installation # Installing PkgCite... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [50d0efc5] + PkgCite v0.1.3 Updating `~/.julia/environments/v1.10/Manifest.toml` [2027ae74] + BibInternal v0.3.7 [13533e5b] + BibParser v0.2.2 ⌅ [f1be7e48] + Bibliography v0.2.20 [34da2185] + Compat v4.16.0 [864edb3b] + DataStructures v0.18.20 ⌃ [5789e2e9] + FileIO v1.16.5 ⌅ [cd3eb016] + HTTP v0.9.17 [83e8ac13] + IniFile v0.5.1 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.1 [7d188eb4] + JSONSchema v1.4.1 [739be429] + MbedTLS v1.1.9 [bac558e1] + OrderedCollections v1.8.0 [69de0a69] + Parsers v2.8.1 [50d0efc5] + PkgCite v0.1.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.0 [69024149] + StringEncodings v0.3.7 [856f2bd8] + StructTypes v1.11.0 [1c621080] + TestItems v1.0.0 [5c2747f8] + URIs v1.5.1 [ddb6d928] + YAML v0.4.12 [94ce4f54] + Libiconv_jll v1.18.0+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [83775a58] + Zlib_jll v1.2.13+1 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.36s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 18.1s ################################################################################ # Testing # Testing PkgCite Status `/tmp/jl_PDEkKG/Project.toml` [13533e5b] BibParser v0.2.2 ⌅ [f1be7e48] Bibliography v0.2.20 [864edb3b] DataStructures v0.18.20 ⌅ [cd3eb016] HTTP v0.9.17 [50d0efc5] PkgCite v0.1.3 [b77e0a4c] InteractiveUtils [44cfe95a] Pkg v1.10.0 [8dfed614] Test Status `/tmp/jl_PDEkKG/Manifest.toml` [2027ae74] BibInternal v0.3.7 [13533e5b] BibParser v0.2.2 ⌅ [f1be7e48] Bibliography v0.2.20 [34da2185] Compat v4.16.0 [864edb3b] DataStructures v0.18.20 ⌃ [5789e2e9] FileIO v1.16.5 ⌅ [cd3eb016] HTTP v0.9.17 [83e8ac13] IniFile v0.5.1 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [0f8b85d8] JSON3 v1.14.1 [7d188eb4] JSONSchema v1.4.1 [739be429] MbedTLS v1.1.9 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.1 [50d0efc5] PkgCite v0.1.3 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [ae029012] Requires v1.3.0 [69024149] StringEncodings v0.3.7 [856f2bd8] StructTypes v1.11.0 [1c621080] TestItems v1.0.0 [5c2747f8] URIs v1.5.1 [ddb6d928] YAML v0.4.12 [94ce4f54] Libiconv_jll v1.18.0+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [83775a58] Zlib_jll v1.2.13+1 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Activating project at `~/.julia/packages/PkgCite/4M5Zw/test/test_env` ┌ Warning: The active manifest file is an older format with no julia version entry. Dependencies may have been resolved with a different julia version. └ @ ~/.julia/packages/PkgCite/4M5Zw/test/test_env/Manifest.toml:0 Status `~/.julia/packages/PkgCite/4M5Zw/test/test_env/Project.toml` ⌃ [0c5d862f] Symbolics v2.1.0 Info Packages marked with ⌃ have new versions available and may be upgradable. ┌ Warning: There was an error reading the CITATION.bib file for Distributions │ exception = KeyError: key "july" not found └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:27 ┌ Warning: There was an error reading the CITATION.bib file for Distributions │ exception = KeyError: key "july" not found └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:27 [ Info: A julia_citations.bib file with the citations for ArrayInterface, LabelledArrays, QuadGK, RecursiveArrayTools and Symbolics was generated in the current working directory (/home/pkgeval/.julia/packages/PkgCite/4M5Zw/test). ┌ Warning: There was an error reading the CITATION.bib file for Distributions │ exception = KeyError: key "july" not found └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:27 ┌ Warning: There was an error reading the CITATION.bib file for Distributions │ exception = KeyError: key "july" not found └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:27 ┌ Error: ErrorException("no clipboard command found, please install xsel or xclip or wl-clipboard") └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/tool_report.jl:98 ┌ Warning: Overwriting julia_citations.bib └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:69 [ Info: A julia_citations.bib file with the citations for LabelledArrays, QuadGK, Symbolics, RecursiveArrayTools, Julia and ArrayInterface was generated in the current working directory (/home/pkgeval/.julia/packages/PkgCite/4M5Zw/test). Clipboard: Error During Test at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:77 Test threw exception Expression: clipboard() == CITE_STR_JL no clipboard command found, please install xsel or xclip or wl-clipboard Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] clipboardcmd() @ InteractiveUtils /opt/julia/share/julia/stdlib/v1.10/InteractiveUtils/src/clipboard.jl:62 [3] clipboard() @ InteractiveUtils /opt/julia/share/julia/stdlib/v1.10/InteractiveUtils/src/clipboard.jl:73 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:669 [inlined] [5] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:77 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [7] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:72 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [9] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:61 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [11] top-level scope @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:11 ┌ Warning: There was an error reading the CITATION.bib file for Distributions │ exception = KeyError: key "july" not found └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:27 ┌ Error: ErrorException("no clipboard command found, please install xsel or xclip or wl-clipboard") └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/tool_report.jl:98 ┌ Warning: Overwriting julia_citations.bib └ @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:69 [ Info: A julia_citations.bib file with the citations for LabelledArrays, QuadGK, Symbolics, RecursiveArrayTools, Julia and ArrayInterface was generated in the current working directory (/home/pkgeval/.julia/packages/PkgCite/4M5Zw/test). Clipboard: Error During Test at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:83 Test threw exception Expression: clipboard() == CITE_STR no clipboard command found, please install xsel or xclip or wl-clipboard Stacktrace: [1] error(s::String) @ Base ./error.jl:35 [2] clipboardcmd() @ InteractiveUtils /opt/julia/share/julia/stdlib/v1.10/InteractiveUtils/src/clipboard.jl:62 [3] clipboard() @ InteractiveUtils /opt/julia/share/julia/stdlib/v1.10/InteractiveUtils/src/clipboard.jl:73 [4] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:669 [inlined] [5] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:83 [inlined] [6] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [7] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:72 [inlined] [8] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [9] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:61 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [11] top-level scope @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:11 Activating project at `~/.julia/packages/PkgCite/4M5Zw/test/badge_env` Installed GR ─ v0.57.5 Building GR → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b83e3125048a9c3158cbb7ca423790c7b1b57bea/build.log` Status `~/.julia/packages/PkgCite/4M5Zw/test/badge_env/Project.toml` ⌃ [91a5bcdd] Plots v1.16.5 ⌃ [64499a7a] WriteVTK v1.9.2 Info Packages marked with ⌃ have new versions available and may be upgradable. PkgCite using badge: Error During Test at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:87 Got exception outside of a @test ArgumentError: invalid index: nothing of type Nothing Stacktrace: [1] to_index(i::Nothing) @ Base ./indices.jl:300 [2] to_index(A::Vector{Pair{SubString{String}, SubString{String}}}, i::Nothing) @ Base ./indices.jl:277 [3] _to_indices1(A::Vector{Pair{SubString{String}, SubString{String}}}, inds::Tuple{Base.OneTo{Int64}}, I1::Nothing) @ Base ./indices.jl:359 [4] to_indices @ ./indices.jl:354 [inlined] [5] to_indices @ ./indices.jl:345 [inlined] [6] getindex @ ./abstractarray.jl:1290 [inlined] [7] get_citation_badge(urlbadge::String) @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:118 [8] get_citation(pkg::Pkg.API.PackageInfo; badge::Bool) @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:30 [9] get_citation @ ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:10 [inlined] [10] collect_citations(only_direct::Bool; badge::Bool) @ PkgCite ~/.julia/packages/PkgCite/4M5Zw/src/citations.jl:49 [11] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:93 [inlined] [12] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [13] macro expansion @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:88 [inlined] [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [15] top-level scope @ ~/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:11 [16] include(fname::String) @ Base.MainInclude ./client.jl:494 [17] top-level scope @ none:6 [18] eval @ ./boot.jl:385 [inlined] [19] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [20] _start() @ Base ./client.jl:557 Test Summary: | Pass Error Broken Total Time PkgCite.jl | 21 3 1 25 42.7s Empty env | 1 1 6.8s Packages | 5 1 6 1.1s Citations | 3 3 0.3s Citations in .bib | 4 4 0.0s Only direct dependencies | 3 3 0.3s PkgCite sentence | 5 2 7 3.8s Clipboard | 2 2 4 3.7s PkgCite using badge | 1 1 20.2s ERROR: LoadError: Some tests did not pass: 21 passed, 0 failed, 3 errored, 1 broken. in expression starting at /home/pkgeval/.julia/packages/PkgCite/4M5Zw/test/runtests.jl:10 Testing failed after 49.08s ERROR: LoadError: Package PkgCite errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 86.73s: package tests unexpectedly errored