Package evaluation of Peridynamics on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T10:51:46.302 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 4.8s ################################################################################ # Installation # Installing Peridynamics... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [4dc47793] + Peridynamics v0.3.3 Updating `~/.julia/environments/v1.10/Manifest.toml` [bc6b9049] + AbaqusReader v0.2.6 [79e6a3ab] + Adapt v4.2.0 [4fba245c] + ArrayInterface v7.18.0 [a9b6321e] + Atomix v1.1.0 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] + CEnum v0.5.0 [2a0fbf3d] + CPUSummary v0.2.6 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [adafc99b] + CpuId v0.3.1 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.3 [e2ba6199] + ExprTools v0.1.10 [1a297f60] + FillArrays v1.13.0 [46192b85] + GPUArraysCore v0.2.0 [0e44f5e4] + Hwloc v3.3.0 [615f187c] + IfElse v0.1.1 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [10f19ff3] + LayoutPointers v0.1.17 [9c8b4983] + LightXML v0.9.1 [da04e1cc] + MPI v0.20.22 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.15 [d125e4d3] + ManualMemory v0.1.8 [4d1e1d77] + Nullables v1.0.0 [4dc47793] + Peridynamics v0.3.3 [eebad327] + PkgVersion v0.3.3 [1c4d5385] + PointNeighbors v0.4.8 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [94e857df] + SIMDTypes v0.1.0 [91464d47] + StableTasks v0.1.6 [aedffcd0] + Static v1.1.1 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [7792a7ef] + StrideArraysCore v0.5.7 [90a7ee08] + SysInfo v0.3.0 [811555cd] + ThreadPinning v1.0.2 [6f48bc29] + ThreadPinningCore v0.4.5 [8290d209] + ThreadingUtilities v0.5.2 [a759f4b9] + TimerOutputs v0.5.27 [3bb67fe8] + TranscodingStreams v0.11.3 [013be700] + UnsafeAtomics v0.3.0 [4004b06d] + VTKBase v1.0.1 [64499a7a] + WriteVTK v1.21.1 [e33a78d0] + Hwloc_jll v2.12.0+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [7cb0a576] + MPICH_jll v4.3.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.2+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+0 [02c8fc9c] + XML2_jll v2.13.6+1 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Installation completed after 7.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 65.85s ################################################################################ # Testing # Testing Peridynamics Status `/tmp/jl_uvzG0K/Project.toml` [4c88cf16] Aqua v0.8.11 [4dc47793] Peridynamics v0.3.3 [f8b46487] TestItemRunner v1.1.0 [8dfed614] Test Status `/tmp/jl_uvzG0K/Manifest.toml` [bc6b9049] AbaqusReader v0.2.6 [79e6a3ab] Adapt v4.2.0 [4c88cf16] Aqua v0.8.11 [4fba245c] ArrayInterface v7.18.0 [a9b6321e] Atomix v1.1.0 [62783981] BitTwiddlingConvenienceFunctions v0.1.6 [fa961155] CEnum v0.5.0 [2a0fbf3d] CPUSummary v0.2.6 [fb6a15b2] CloseOpenIntervals v0.1.13 [944b1d66] CodecZlib v0.7.8 [f70d9fcc] CommonWorldInvalidations v1.0.0 [34da2185] Compat v4.16.0 [adafc99b] CpuId v0.3.1 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.3 [e2ba6199] ExprTools v0.1.10 [1a297f60] FillArrays v1.13.0 [46192b85] GPUArraysCore v0.2.0 [0e44f5e4] Hwloc v3.3.0 [615f187c] IfElse v0.1.1 [692b3bcd] JLLWrappers v1.7.0 [63c18a36] KernelAbstractions v0.9.34 [10f19ff3] LayoutPointers v0.1.17 [9c8b4983] LightXML v0.9.1 [da04e1cc] MPI v0.20.22 [3da0fdf6] MPIPreferences v0.1.11 [1914dd2f] MacroTools v0.5.15 [d125e4d3] ManualMemory v0.1.8 [4d1e1d77] Nullables v1.0.0 [4dc47793] Peridynamics v0.3.3 [eebad327] PkgVersion v0.3.3 [1c4d5385] PointNeighbors v0.4.8 [f517fe37] Polyester v0.7.16 [1d0040c9] PolyesterWeave v0.2.2 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.2 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [94e857df] SIMDTypes v0.1.0 [91464d47] StableTasks v0.1.6 [aedffcd0] Static v1.1.1 [0d7ed370] StaticArrayInterface v1.8.0 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [7792a7ef] StrideArraysCore v0.5.7 [90a7ee08] SysInfo v0.3.0 [f8b46487] TestItemRunner v1.1.0 [1c621080] TestItems v1.0.0 [811555cd] ThreadPinning v1.0.2 [6f48bc29] ThreadPinningCore v0.4.5 [8290d209] ThreadingUtilities v0.5.2 [a759f4b9] TimerOutputs v0.5.27 [3bb67fe8] TranscodingStreams v0.11.3 [013be700] UnsafeAtomics v0.3.0 [4004b06d] VTKBase v1.0.1 [64499a7a] WriteVTK v1.21.1 [e33a78d0] Hwloc_jll v2.12.0+0 [94ce4f54] Libiconv_jll v1.18.0+0 [7cb0a576] MPICH_jll v4.3.0+0 [f1f71cc9] MPItrampoline_jll v5.5.2+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+0 [02c8fc9c] XML2_jll v2.13.6+1 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Testing Running tests... ERROR: LoadError: InitError: TaskFailedException Stacktrace: [1] wait @ ./task.jl:359 [inlined] [2] fetch @ ./task.jl:379 [inlined] [3] fetch @ ~/.julia/packages/StableTasks/cSY7d/src/internals.jl:9 [inlined] [4] uv_thread_setaffinity(tid::Int64, mask::Vector{Int8}) @ ThreadPinningCore.LibCalls ~/.julia/packages/ThreadPinningCore/fdkhT/src/libcalls.jl:65 [5] setaffinity(mask::Vector{Int8}; threadid::Int64) @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:177 [6] setaffinity @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:145 [inlined] [7] pinthread(cpuid::Int64; threadid::Int64) @ ThreadPinningCore.Internals ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:192 [8] pinthread @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:182 [inlined] [9] #pinthreads#24 @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/internals.jl:210 [inlined] [10] pinthreads(cpuids::Vector{Int64}; warn::Bool, force::Bool, kwargs::@Kwargs{}) @ ThreadPinning.Pinning ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:305 [11] pinthreads @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:292 [inlined] [12] #pinthreads#19 @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:352 [inlined] [13] pinthreads(symb::Symbol; kwargs::@Kwargs{force::Bool}) @ ThreadPinning.Pinning ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:346 [14] pinthreads @ ~/.julia/packages/ThreadPinning/qBVhU/src/pinning.jl:346 [inlined] [15] __init__() @ Peridynamics ~/.julia/packages/Peridynamics/LZzLb/src/Peridynamics.jl:36 [16] run_module_init(mod::Module, i::Int64) @ Base ./loading.jl:1193 [17] register_restored_modules(sv::Core.SimpleVector, pkg::Base.PkgId, path::String) @ Base ./loading.jl:1181 [18] _include_from_serialized(pkg::Base.PkgId, path::String, ocachepath::Nothing, depmods::Vector{Any}) @ Base ./loading.jl:1126 [19] _require_search_from_serialized(pkg::Base.PkgId, sourcepath::String, build_id::UInt128) @ Base ./loading.jl:1651 [20] _require(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2008 [21] __require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1882 [22] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [23] invoke_in_world @ ./essentials.jl:923 [inlined] [24] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:1873 [25] macro expansion @ ./loading.jl:1860 [inlined] [26] macro expansion @ ./lock.jl:267 [inlined] [27] __require(into::Module, mod::Symbol) @ Base ./loading.jl:1823 [28] #invoke_in_world#3 @ ./essentials.jl:926 [inlined] [29] invoke_in_world @ ./essentials.jl:923 [inlined] [30] require(into::Module, mod::Symbol) @ Base ./loading.jl:1816 [31] eval @ ./boot.jl:385 [inlined] [32] run_testitem(filepath::String, use_default_usings::Bool, setups::Vector{Symbol}, package_name::String, original_code::String, line::Int64, column::Int64, test_setup_module_set::TestItemRunner.TestSetupModuleSet, testsetups::Dict{Symbol, Any}) @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:94 [33] run_tests(path::String; filter::Nothing, verbose::Bool) @ TestItemRunner ~/.julia/packages/TestItemRunner/Q6zqe/src/TestItemRunner.jl:221 [34] top-level scope @ ~/.julia/packages/Peridynamics/LZzLb/test/runtests.jl:3 [35] include(fname::String) @ Base.MainInclude ./client.jl:494 [36] top-level scope @ none:6 nested task error: uv_thread_setaffinity returned a non-zero error code: -22 Stacktrace: [1] uv_thread_setaffinity @ ~/.julia/packages/ThreadPinningCore/fdkhT/src/libcalls.jl:60 [inlined] [2] #5 @ ~/.julia/packages/StableTasks/cSY7d/src/internals.jl:169 [inlined] [3] (::ThreadPinningCore.LibCalls.var"#6#8"{StableTasks.AtomicRef{Nothing}, ThreadPinningCore.LibCalls.var"#5#7"{Vector{Int8}}})() @ ThreadPinningCore.LibCalls ~/.julia/packages/StableTasks/cSY7d/src/internals.jl:141 during initialization of module Peridynamics in expression starting at /home/pkgeval/.julia/packages/Peridynamics/LZzLb/test/runtests.jl:3 Testing failed after 33.14s ERROR: LoadError: Package Peridynamics errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 149.26s: package tests unexpectedly errored