Package evaluation of KernelFunctions on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T07:48:33.232 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 4.82s ################################################################################ # Installation # Installing KernelFunctions... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [ec8451be] + KernelFunctions v0.10.64 Updating `~/.julia/environments/v1.10/Manifest.toml` [66dad0bd] + AliasTables v1.1.3 [d360d2e6] + ChainRulesCore v1.25.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.3 [1a297f60] + FillArrays v1.13.0 ⌅ [d9f16b24] + Functors v0.4.12 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [ec8451be] + KernelFunctions v0.10.64 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [e1d29d7a] + Missings v1.2.0 [bac558e1] + OrderedCollections v1.8.0 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [ae029012] + Requires v1.3.0 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [62fd8b95] + TensorCore v0.1.1 [700de1a5] + ZygoteRules v0.2.7 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.1+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.43s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 13.12s ################################################################################ # Testing # Testing KernelFunctions Status `/tmp/jl_dx2vHE/Project.toml` [39de3d68] AxisArrays v0.4.7 [d360d2e6] ChainRulesCore v1.25.1 [cdddcdb0] ChainRulesTestUtils v1.13.0 [34da2185] Compat v4.16.0 [b4f34e82] Distances v0.10.12 ⌅ [e30172f5] Documenter v0.27.25 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v0.10.38 ⌅ [d9f16b24] Functors v0.4.12 [ec8451be] KernelFunctions v0.10.64 [2c470bb0] Kronecker v0.5.5 [2ab3a3ac] LogExpFunctions v0.3.29 [90014a1f] PDMats v0.11.32 [37e2e3b7] ReverseDiff v1.15.3 [276daf66] SpecialFunctions v2.5.0 [860ef19b] StableRNGs v1.0.2 [90137ffa] StaticArrays v1.9.12 ⌅ [e88e6eb3] Zygote v0.6.75 [37e2e46d] LinearAlgebra [9a3f8284] Random [10745b16] Statistics v1.10.0 [8dfed614] Test Status `/tmp/jl_dx2vHE/Manifest.toml` [a4c015fc] ANSIColoredPrinters v0.0.1 [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [a9b6321e] Atomix v1.1.0 [39de3d68] AxisArrays v0.4.7 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.2 [d360d2e6] ChainRulesCore v1.25.1 [cdddcdb0] ChainRulesTestUtils v1.13.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.3 ⌅ [e30172f5] Documenter v0.27.25 [1a297f60] FillArrays v1.13.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 ⌅ [d9f16b24] Functors v0.4.12 [0c68f7d7] GPUArrays v11.2.2 [46192b85] GPUArraysCore v0.2.0 [076d061b] HashArrayMappedTries v0.2.0 [b5f81e59] IOCapture v0.2.5 [7869d1d1] IRTools v0.4.14 [8197267c] IntervalSets v0.7.10 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 [63c18a36] KernelAbstractions v0.9.34 [ec8451be] KernelFunctions v0.10.64 [2c470bb0] Kronecker v0.5.5 [929cbde3] LLVM v9.2.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 [e1d29d7a] Missings v1.2.0 [77ba4419] NaNMath v1.1.2 [356022a1] NamedDims v1.2.2 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.32 [69de0a69] Parsers v2.8.1 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [b3c3ace0] RangeArrays v0.3.2 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [37e2e3b7] ReverseDiff v1.15.3 [708f8203] Richardson v1.4.2 [7e506255] ScopedValues v1.3.0 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.0 [860ef19b] StableRNGs v1.0.2 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [09ab397b] StructArrays v0.7.0 [fd094767] Suppressor v0.2.8 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [62fd8b95] TensorCore v0.1.1 [013be700] UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] Zygote v0.6.75 [700de1a5] ZygoteRules v0.2.7 [dad2f222] LLVMExtra_jll v0.0.35+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.1+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... ┌ Warning: inference tests have been disabled └ @ ChainRulesTestUtils ~/.julia/packages/ChainRulesTestUtils/Ko1Wr/src/global_config.jl:13 [ Info: Packages Loaded Zygote: Error During Test at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/transform/selecttransform.jl:75 Got exception outside of a @test ArgumentError: unable to check bounds for indices of type Symbol Stacktrace: [1] checkindex(::Type{Bool}, inds::Base.OneTo{Int64}, i::Symbol) @ Base ./abstractarray.jl:759 [2] checkindex @ ./abstractarray.jl:775 [inlined] [3] checkbounds_indices @ ./abstractarray.jl:728 [inlined] [4] checkbounds @ ./abstractarray.jl:681 [inlined] [5] checkbounds @ ./abstractarray.jl:702 [inlined] [6] view(::Matrix{Float64}, ::Vector{Symbol}, ::Base.Slice{Base.OneTo{Int64}}) @ Base ./subarray.jl:184 [7] ∇getindex!(::Matrix{Float64}, ::Matrix{Float64}, ::Vector{Symbol}, ::Vararg{Any}) @ ChainRules ~/.julia/packages/ChainRules/sm2ny/src/rulesets/Base/indexing.jl:151 [8] ∇getindex(::AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, ::Matrix{Float64}, ::Vector{Symbol}, ::Vararg{Any}) @ ChainRules ~/.julia/packages/ChainRules/sm2ny/src/rulesets/Base/indexing.jl:89 [9] #672 @ ~/.julia/packages/ChainRules/sm2ny/src/rulesets/Base/indexing.jl:69 [inlined] [10] unthunk @ ~/.julia/packages/ChainRulesCore/U6wNx/src/tangent_types/thunks.jl:213 [inlined] [11] unthunk @ ~/.julia/packages/ChainRulesCore/U6wNx/src/tangent_types/thunks.jl:252 [inlined] [12] wrap_chainrules_output @ ~/.julia/packages/Zygote/TWpme/src/compiler/chainrules.jl:110 [inlined] [13] map @ ./tuple.jl:293 [inlined] [14] map @ ./tuple.jl:294 [inlined] [15] wrap_chainrules_output @ ~/.julia/packages/Zygote/TWpme/src/compiler/chainrules.jl:111 [inlined] [16] ZBack @ ~/.julia/packages/Zygote/TWpme/src/compiler/chainrules.jl:212 [inlined] [17] _map @ ~/.julia/packages/KernelFunctions/nkiEB/src/transform/selecttransform.jl:28 [inlined] [18] kernelmatrix @ ~/.julia/packages/KernelFunctions/nkiEB/src/kernels/transformedkernel.jl:113 [inlined] [19] #kernelmatrix#78 @ ~/.julia/packages/KernelFunctions/nkiEB/src/matrix/kernelmatrix.jl:189 [inlined] [20] (::Zygote.Pullback{Tuple{KernelFunctions.var"##kernelmatrix#78", Int64, typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Tuple{Zygote.Pullback{Tuple{Type{NamedTuple{(:obsdim,)}}, Tuple{Int64}}, Tuple{Zygote.var"#2220#back#319"{Zygote.Jnew{@NamedTuple{obsdim::Int64}, Nothing, true}}}}, Zygote.Pullback{Tuple{typeof(Core.kwcall), @NamedTuple{obsdim::Int64}, typeof(KernelFunctions.vec_of_vecs), AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Any}, Zygote.var"#2013#back#208"{typeof(identity)}, Zygote.Pullback{Tuple{typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, ColVecs{Float64, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Base.Slice{Base.OneTo{Int64}}, Int64}, true}, Tuple{Axis{:row, Vector{Symbol}}}}}}, Tuple{Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:kernel, Zygote.Context{false}, TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, SqExponentialKernel{Euclidean}}}, Zygote.Pullback{Tuple{typeof(KernelFunctions._map), SelectTransform{Vector{Symbol}}, ColVecs{Float64, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Base.Slice{Base.OneTo{Int64}}, Int64}, true}, Tuple{Axis{:row, Vector{Symbol}}}}}}, Tuple{Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:X, Zygote.Context{false}, ColVecs{Float64, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Base.Slice{Base.OneTo{Int64}}, Int64}, true}, Tuple{Axis{:row, Vector{Symbol}}}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}}, Zygote.ZBack{ChainRules.var"#view_pullback#680"{AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, Tuple{Vector{Symbol}, Colon}, Tuple{NoTangent, NoTangent}}}, Zygote.Pullback{Tuple{typeof(KernelFunctions._wrap), AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, Type{ColVecs}}, Tuple{Zygote.ZBack{KernelFunctions.var"#ColVecs_pullback#161"}}}, Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:select, Zygote.Context{false}, SelectTransform{Vector{Symbol}}, Vector{Symbol}}}}}, Zygote.Pullback{Tuple{typeof(kernelmatrix), SqExponentialKernel{Euclidean}, ColVecs{Float64, AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Vector{Int64}, Int64}, false}, Tuple{Axis{:row, Vector{Symbol}}}}}}, Tuple{Zygote.Pullback{Tuple{typeof(metric), SqExponentialKernel{Euclidean}}, Tuple{Zygote.Pullback{Tuple{Type{SqEuclidean}}, Tuple{}}}}, Zygote.Pullback{Tuple{typeof(KernelFunctions.pairwise), SqEuclidean, ColVecs{Float64, AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Vector{Int64}, Int64}, false}, Tuple{Axis{:row, Vector{Symbol}}}}}}, Tuple{Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:X, Zygote.Context{false}, ColVecs{Float64, AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, AxisVector{Float64, SubArray{Float64, 1, Matrix{Float64}, Tuple{Vector{Int64}, Int64}, false}, Tuple{Axis{:row, Vector{Symbol}}}}}, AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}}, Zygote.Pullback{Tuple{Type{NamedTuple{(:dims,)}}, Tuple{Int64}}, Tuple{Zygote.var"#2220#back#319"{Zygote.Jnew{@NamedTuple{dims::Int64}, Nothing, true}}}}, Zygote.var"#2013#back#208"{typeof(identity)}, ZygoteDistancesExt.var"#63#back#30"{ZygoteDistancesExt.var"#32#33"{AxisMatrix{Float64, SubArray{Float64, 2, Matrix{Float64}, Tuple{Vector{Int64}, Base.Slice{Base.OneTo{Int64}}}, false}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, typeof(identity)}}}}, Zygote.var"#2845#back#678"{Zygote.var"#map_back#672"{KernelFunctions.var"#68#69"{SqExponentialKernel{Euclidean}}, 1, Tuple{Matrix{Float64}}, Tuple{Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}}, Matrix{Tuple{Float64, Zygote.Pullback{Tuple{KernelFunctions.var"#68#69"{SqExponentialKernel{Euclidean}}, Float64}, Tuple{Zygote.Pullback{Tuple{typeof(kappa), SqExponentialKernel{Euclidean}, Float64}, Tuple{Zygote.ZBack{ChainRules.var"#-_pullback#421"{Int64, ProjectTo{Float64, @NamedTuple{}}}}, Zygote.ZBack{ChainRules.var"#exp_pullback#397"{Float64, ProjectTo{Float64, @NamedTuple{}}}}, Zygote.ZBack{ChainRules.var"#/_pullback#413"{Float64, Float64, ProjectTo{Float64, @NamedTuple{}}, ProjectTo{Float64, @NamedTuple{}}}}}}, Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:κ, Zygote.Context{false}, KernelFunctions.var"#68#69"{SqExponentialKernel{Euclidean}}, SqExponentialKernel{Euclidean}}}}}}}}}, Zygote.var"#2210#back#317"{Zygote.Jnew{KernelFunctions.var"#68#69"{SqExponentialKernel{Euclidean}}, Nothing, false}}}}, Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:transform, Zygote.Context{false}, TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, SelectTransform{Vector{Symbol}}}}}}}})(Δ::FillArrays.Fill{Float64, 2, Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}}) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface2.jl:0 [21] kernelmatrix @ ~/.julia/packages/KernelFunctions/nkiEB/src/matrix/kernelmatrix.jl:188 [inlined] [22] (::Zygote.Pullback{Tuple{typeof(Core.kwcall), @NamedTuple{obsdim::Int64}, typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Any})(Δ::FillArrays.Fill{Float64, 2, Tuple{Base.OneTo{Int64}, Base.OneTo{Int64}}}) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface2.jl:0 [23] testfunction @ ~/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:83 [inlined] [24] (::Zygote.Pullback{Tuple{typeof(testfunction), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, Int64}, Tuple{Zygote.Pullback{Tuple{Type{NamedTuple{(:obsdim,)}}, Tuple{Int64}}, Tuple{Zygote.var"#2220#back#319"{Zygote.Jnew{@NamedTuple{obsdim::Int64}, Nothing, true}}}}, Zygote.Pullback{Tuple{typeof(Core.kwcall), @NamedTuple{obsdim::Int64}, typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Any}, Zygote.var"#3021#back#789"{Zygote.var"#783#787"{Matrix{Float64}}}, Zygote.var"#2013#back#208"{typeof(identity)}}})(Δ::Float64) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface2.jl:0 [25] #193 @ ~/.julia/packages/KernelFunctions/nkiEB/test/transform/selecttransform.jl:80 [inlined] [26] (::Zygote.Pullback{Tuple{var"#193#218"{TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Tuple{Zygote.Pullback{Tuple{typeof(testfunction), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, Int64}, Tuple{Zygote.Pullback{Tuple{Type{NamedTuple{(:obsdim,)}}, Tuple{Int64}}, Tuple{Zygote.var"#2220#back#319"{Zygote.Jnew{@NamedTuple{obsdim::Int64}, Nothing, true}}}}, Zygote.Pullback{Tuple{typeof(Core.kwcall), @NamedTuple{obsdim::Int64}, typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Any}, Zygote.var"#3021#back#789"{Zygote.var"#783#787"{Matrix{Float64}}}, Zygote.var"#2013#back#208"{typeof(identity)}}}, Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:ta_row, Zygote.Context{false}, var"#193#218"{TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}, TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}}}})(Δ::Float64) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface2.jl:0 [27] (::Zygote.var"#78#79"{Zygote.Pullback{Tuple{var"#193#218"{TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Tuple{Zygote.Pullback{Tuple{typeof(testfunction), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}, Int64}, Tuple{Zygote.Pullback{Tuple{Type{NamedTuple{(:obsdim,)}}, Tuple{Int64}}, Tuple{Zygote.var"#2220#back#319"{Zygote.Jnew{@NamedTuple{obsdim::Int64}, Nothing, true}}}}, Zygote.Pullback{Tuple{typeof(Core.kwcall), @NamedTuple{obsdim::Int64}, typeof(kernelmatrix), TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}, AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}}, Any}, Zygote.var"#3021#back#789"{Zygote.var"#783#787"{Matrix{Float64}}}, Zygote.var"#2013#back#208"{typeof(identity)}}}, Zygote.var"#2180#back#307"{Zygote.var"#back#306"{:ta_row, Zygote.Context{false}, var"#193#218"{TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}, TransformedKernel{SqExponentialKernel{Euclidean}, SelectTransform{Vector{Symbol}}}}}}}})(Δ::Float64) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface.jl:91 [28] gradient(f::Function, args::AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}) @ Zygote ~/.julia/packages/Zygote/TWpme/src/compiler/interface.jl:148 [29] gradient(f::Function, ::Val{:Zygote}, args::AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}) @ Main ~/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:48 [30] gradient(f::Function, s::Symbol, args::AxisMatrix{Float64, Matrix{Float64}, Tuple{Axis{:row, Vector{Symbol}}, Axis{:col, Vector{Symbol}}}}) @ Main ~/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:45 [31] macro expansion @ ~/.julia/packages/KernelFunctions/nkiEB/test/transform/selecttransform.jl:79 [inlined] [32] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] [33] macro expansion @ ~/.julia/packages/KernelFunctions/nkiEB/test/transform/selecttransform.jl:75 [inlined] [34] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [35] top-level scope @ ~/.julia/packages/KernelFunctions/nkiEB/test/transform/selecttransform.jl:2 [36] include(fname::String) @ Base.MainInclude ./client.jl:494 [37] macro expansion @ ~/.julia/packages/KernelFunctions/nkiEB/test/runtests.jl:79 [inlined] [38] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [39] macro expansion @ ~/.julia/packages/KernelFunctions/nkiEB/test/runtests.jl:69 [inlined] [40] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [41] top-level scope @ ~/.julia/packages/KernelFunctions/nkiEB/test/runtests.jl:67 [42] include(fname::String) @ Base.MainInclude ./client.jl:494 [43] top-level scope @ none:6 [44] eval @ ./boot.jl:385 [inlined] [45] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [46] _start() @ Base ./client.jl:557 [ Info: Ran tests on Transform ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 21 running 1 of 1 signal (10): User defined signal 1 subtype_tuple at /source/src/subtype.c:1312 [inlined] subtype at /source/src/subtype.c:1486 subtype_unionall at /source/src/subtype.c:948 subtype at /source/src/subtype.c:1449 exists_subtype at /source/src/subtype.c:1716 [inlined] forall_exists_subtype at /source/src/subtype.c:1745 ijl_subtype_env at /source/src/subtype.c:2204 jl_type_intersection_env_s at /source/src/subtype.c:4264 jl_typemap_intersection_node_visitor at /source/src/typemap.c:543 jl_typemap_intersection_visitor at /source/src/typemap.c:812 jl_typemap_intersection_visitor at /source/src/typemap.c:793 ml_mtable_visitor at /source/src/gf.c:3296 [inlined] ml_matches at /source/src/gf.c:3669 ml_matches at /source/src/gf.c:3588 [inlined] ijl_matching_methods at /source/src/gf.c:2284 _methods_by_ftype at ./reflection.jl:1031 _findall at ./compiler/methodtable.jl:105 [inlined] #findall#281 at ./compiler/methodtable.jl:74 [inlined] findall at ./compiler/methodtable.jl:73 [inlined] #findall#283 at ./compiler/methodtable.jl:119 findall at ./compiler/methodtable.jl:110 [inlined] find_matching_methods at ./compiler/abstractinterpretation.jl:289 abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:24 abstract_call_known at ./compiler/abstractinterpretation.jl:2101 abstract_call at ./compiler/abstractinterpretation.jl:2184 abstract_call at ./compiler/abstractinterpretation.jl:2177 abstract_call at ./compiler/abstractinterpretation.jl:2369 abstract_eval_call at ./compiler/abstractinterpretation.jl:2385 abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395 abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639 abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2904 typeinf_local at ./compiler/abstractinterpretation.jl:3113 typeinf_nocycle at ./compiler/abstractinterpretation.jl:3201 _typeinf at ./compiler/typeinfer.jl:247 typeinf at ./compiler/typeinfer.jl:216 typeinf_edge at ./compiler/typeinfer.jl:930 abstract_call_method at ./compiler/abstractinterpretation.jl:633 abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95 abstract_call_unknown at ./compiler/abstractinterpretation.jl:2171 abstract_call at ./compiler/abstractinterpretation.jl:2181 abstract_call at ./compiler/abstractinterpretation.jl:2177 abstract_call at ./compiler/abstractinterpretation.jl:2369 abstract_eval_call at ./compiler/abstractinterpretation.jl:2385 abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395 abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639 abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928 typeinf_local at ./compiler/abstractinterpretation.jl:3113 typeinf_nocycle at ./compiler/abstractinterpretation.jl:3201 _typeinf at ./compiler/typeinfer.jl:247 typeinf at ./compiler/typeinfer.jl:216 typeinf_edge at ./compiler/typeinfer.jl:930 abstract_call_method at ./compiler/abstractinterpretation.jl:633 abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95 abstract_call_unknown at ./compiler/abstractinterpretation.jl:2171 abstract_call at ./compiler/abstractinterpretation.jl:2181 abstract_call at ./compiler/abstractinterpretation.jl:2177 abstract_call at ./compiler/abstractinterpretation.jl:2369 abstract_eval_call at ./compiler/abstractinterpretation.jl:2385 abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395 abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639 abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928 typeinf_local at ./compiler/abstractinterpretation.jl:3113 typeinf_nocycle at ./compiler/abstractinterpretation.jl:3201 _typeinf at ./compiler/typeinfer.jl:247 typeinf at ./compiler/typeinfer.jl:216 typeinf_edge at ./compiler/typeinfer.jl:930 abstract_call_method at ./compiler/abstractinterpretation.jl:633 abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95 abstract_call_known at ./compiler/abstractinterpretation.jl:2101 abstract_call at ./compiler/abstractinterpretation.jl:2184 abstract_call at ./compiler/abstractinterpretation.jl:2177 abstract_call at ./compiler/abstractinterpretation.jl:2369 abstract_eval_call at ./compiler/abstractinterpretation.jl:2385 abstract_eval_statement_expr at ./compiler/abstractinterpretation.jl:2395 abstract_eval_statement at ./compiler/abstractinterpretation.jl:2639 abstract_eval_basic_statement at ./compiler/abstractinterpretation.jl:2928 typeinf_local at ./compiler/abstractinterpretation.jl:3113 typeinf_nocycle at ./compiler/abstractinterpretation.jl:3201 _typeinf at ./compiler/typeinfer.jl:247 typeinf at ./compiler/typeinfer.jl:216 typeinf_ext at ./compiler/typeinfer.jl:1051 typeinf_ext_toplevel at ./compiler/typeinfer.jl:1082 typeinf_ext_toplevel at ./compiler/typeinfer.jl:1078 jfptr_typeinf_ext_toplevel_35711.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] jl_type_infer at /source/src/gf.c:394 jl_generate_fptr_impl at /source/src/jitlayers.cpp:512 jl_compile_method_internal at /source/src/gf.c:2481 [inlined] jl_compile_method_internal at /source/src/gf.c:2368 _jl_invoke at /source/src/gf.c:2887 [inlined] ijl_apply_generic at /source/src/gf.c:3077 gradient at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:61 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 gradient at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:45 compare_gradient at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:77 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 macro expansion at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:213 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1669 [inlined] macro expansion at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:205 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] macro expansion at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:203 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] test_AD at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:167 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 #test_ADs#7 at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:98 test_ADs at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/test_utils.jl:92 unknown function (ip: 0x77b196012cc9) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:635 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 jl_interpret_toplevel_thunk at /source/src/interpreter.c:775 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] include_string at ./loading.jl:2146 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 _include at ./loading.jl:2206 include at ./client.jl:494 unknown function (ip: 0x77b1afee1125) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:635 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 jl_interpret_toplevel_thunk at /source/src/interpreter.c:775 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] include_string at ./loading.jl:2146 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 _include at ./loading.jl:2206 include at ./client.jl:494 unknown function (ip: 0x77b1afee1125) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:635 jl_interpret_toplevel_thunk at /source/src/interpreter.c:775 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:557 jfptr__start_82985.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] true_main at /source/src/jlapi.c:582 jl_repl_entrypoint at /source/src/jlapi.c:731 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x77b1b0d75249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 poptask at ./task.jl:999 wait at ./task.jl:1008 task_done_hook at ./task.jl:682 jfptr_task_done_hook_75545.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] jl_finish_task at /source/src/task.c:327 start_task at /source/src/task.c:1267 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.10/Profile/src/Profile.jl:1225 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000714991fb5460 Total snapshots: 143. Utilization: 0% ╎143 @Base/task.jl:682; task_done_hook(t::Task) ╎ 143 @Base/task.jl:1008; wait() 142╎ 143 @Base/task.jl:999; poptask(W::Base.IntrusiveLinkedListSynchronized{Ta… [1] signal (15): Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 epoll_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/epoll.c:236 uv_run at /workspace/srcdir/libuv/src/unix/core.c:400 ijl_task_get_next at /source/src/partr.c:478 poptask at ./task.jl:999 [21] signal (15): Terminated in expression starting at /home/pkgeval/.julia/packages/KernelFunctions/nkiEB/test/basekernels/polynomial.jl:1 wait at ./task.jl:1008 argextype at ./compiler/optimize.jl:339 #wait#645 at ./condition.jl:130 argextype at ./compiler/optimize.jl:340 [inlined] is_known_call at ./compiler/ssair/passes.jl:5 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:142 sroa_pass! at ./compiler/ssair/passes.jl:1034 wait at ./asyncevent.jl:159 [inlined] profile_printing_listener at ./Base.jl:572 #1056 at ./Base.jl:608 run_passes at ./compiler/optimize.jl:489 run_passes at ./compiler/optimize.jl:504 [inlined] optimize at ./compiler/optimize.jl:453 [inlined] _typeinf at ./compiler/typeinfer.jl:272 jfptr_YY.1056_85200.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] start_task at /source/src/task.c:1256 unknown function (ip: (nil)) Allocations: 9911675 (Pool: 9891877; Big: 19798); GC: 12 typeinf at ./compiler/typeinfer.jl:216 typeinf_edge at ./compiler/typeinfer.jl:930 abstract_call_method at ./compiler/abstractinterpretation.jl:633 abstract_call_gf_by_type at ./compiler/abstractinterpretation.jl:95 PkgEval terminated after 2722.18s: test duration exceeded the time limit