Package evaluation of HDF5Utils on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T07:30:47.348 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 3.88s ################################################################################ # Installation # Installing HDF5Utils... Resolving package versions... Installed HDF5 ─ v0.13.6 Updating `~/.julia/environments/v1.10/Project.toml` [2ec8e600] + HDF5Utils v0.1.46 Updating `~/.julia/environments/v1.10/Manifest.toml` [a74b3585] + Blosc v0.7.3 ⌅ [3c3547ce] + DiskArrays v0.2.13 ⌅ [1a297f60] + FillArrays v0.12.8 [c27321d9] + Glob v1.3.1 ⌅ [f67ccb44] + HDF5 v0.13.6 [2ec8e600] + HDF5Utils v0.1.46 [692b3bcd] + JLLWrappers v1.7.0 [3da0fdf6] + MPIPreferences v0.1.11 [21216c6a] + Preferences v1.4.3 [92933f4c] + ProgressMeter v1.10.2 [ae029012] + Requires v1.3.0 [0b7ba130] + Blosc_jll v1.21.6+2 [0234f1f7] + HDF5_jll v1.14.5+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.0+0 [f1f71cc9] + MPItrampoline_jll v5.5.2+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [fe0851c0] + OpenMPI_jll v5.0.7+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building HDF5 → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0713cbabdf855852dfab3ce6447c87145f3d9ea8/build.log` Installation completed after 12.77s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 20.6s ################################################################################ # Testing # Testing HDF5Utils Status `/tmp/jl_Iyi0Rh/Project.toml` ⌅ [3c3547ce] DiskArrays v0.2.13 ⌅ [1a297f60] FillArrays v0.12.8 [c27321d9] Glob v1.3.1 ⌅ [f67ccb44] HDF5 v0.13.6 [2ec8e600] HDF5Utils v0.1.46 [92933f4c] ProgressMeter v1.10.2 [ae029012] Requires v1.3.0 [8ba89e20] Distributed [a63ad114] Mmap [9a3f8284] Random [8dfed614] Test Status `/tmp/jl_Iyi0Rh/Manifest.toml` [a74b3585] Blosc v0.7.3 ⌅ [3c3547ce] DiskArrays v0.2.13 ⌅ [1a297f60] FillArrays v0.12.8 [c27321d9] Glob v1.3.1 ⌅ [f67ccb44] HDF5 v0.13.6 [2ec8e600] HDF5Utils v0.1.46 [692b3bcd] JLLWrappers v1.7.0 [3da0fdf6] MPIPreferences v0.1.11 [21216c6a] Preferences v1.4.3 [92933f4c] ProgressMeter v1.10.2 [ae029012] Requires v1.3.0 [0b7ba130] Blosc_jll v1.21.6+2 [0234f1f7] HDF5_jll v1.14.5+0 [e33a78d0] Hwloc_jll v2.12.0+0 [5ced341a] Lz4_jll v1.10.1+0 [7cb0a576] MPICH_jll v4.3.0+0 [f1f71cc9] MPItrampoline_jll v5.5.2+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [fe0851c0] OpenMPI_jll v5.0.7+0 [458c3c95] OpenSSL_jll v3.0.16+0 [3161d3a3] Zstd_jll v1.5.7+1 [477f73a3] libaec_jll v1.1.3+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition _Array(AbstractArray{T, N}) where {T, N} in module DiskArrays at /home/pkgeval/.julia/packages/DiskArrays/iCPtn/src/array.jl:33 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/diskarrays.jl:129. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition _Array(AbstractArray{T, N}) where {T, N} in module DiskArrays at /home/pkgeval/.julia/packages/DiskArrays/iCPtn/src/array.jl:33 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/diskarrays.jl:129. WARNING: Method definition h5open(AbstractString) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:660 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:1. WARNING: Method definition h5open(AbstractString, AbstractString, Any...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:660 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:1. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(HDF5.h5open), AbstractString) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:660 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:1. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(HDF5.h5open), AbstractString, AbstractString, Any...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:660 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:1. WARNING: Method definition h5open(Function, Any...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:693 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:34. WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(HDF5.h5open), Function, Any...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:693 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:34. WARNING: Method definition close(HDF5.HDF5File) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:780 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/io.jl:43. WARNING: Method definition _getindex(HDF5.HDF5Dataset, Type, Union{Int64, Base.AbstractRange{Int64}}...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:1771 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/hyperslab.jl:1. WARNING: Method definition _setindex!(HDF5.HDF5Dataset, Type, Array{T, N} where N where T, Union{Int64, Base.AbstractRange{Int64}}...) in module HDF5 at /home/pkgeval/.julia/packages/HDF5/T1b9x/src/HDF5.jl:1803 overwritten in module HDF5Utils at /home/pkgeval/.julia/packages/HDF5Utils/bFZUF/src/hyperslab.jl:16. ┌ Warning: Assignment to `x` in soft scope is ambiguous because a global variable by the same name exists: `x` will be treated as a new local. Disambiguate by using `local x` to suppress this warning or `global x` to assign to the existing global variable. └ @ ~/.julia/packages/HDF5Utils/bFZUF/test/runtests.jl:102 (n, d, t_cache / t_read) = (10, 1, 0.3669173753395487) (n, d, t_cache / t_read) = (100, 1, 0.38342989437795877) (n, d, t_cache / t_read) = (200, 1, 0.35813439955407395) (n, d, t_cache / t_read) = (500, 1, 0.3464490386463055) (n, d, t_cache / t_read) = (10000000, 1, 1.384574803496838) (n, d, t_cache / t_read) = (10, 2, 0.5079153613172493) (n, d, t_cache / t_read) = (100, 2, 0.47387446315916315) (n, d, t_cache / t_read) = (200, 2, 0.4747220306720845) (n, d, t_cache / t_read) = (500, 2, 0.3754337672485748) (n, d, t_cache / t_read) = (10, 3, 0.4765205516299569) (n, d, t_cache / t_read) = (100, 3, 0.6845947673535517) (n, d, t_cache / t_read) = (200, 3, 2.0929487692188795) (n, d, t_cache / t_read) = (500, 3, 0.7893128554968082) Testing HDF5Utils tests passed Testing completed after 89.06s PkgEval succeeded after 146.0s