Package evaluation of GaussianMixtureAlignment on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T12:01:47.955 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.29s ################################################################################ # Installation # Installing GaussianMixtureAlignment... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [f2431ed1] + GaussianMixtureAlignment v0.2.2 Updating `~/.julia/environments/v1.10/Manifest.toml` [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌅ [5ae59095] + Colors v0.12.11 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [150eb455] + CoordinateTransformations v0.6.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.3 [497a8b3b] + DoubleFloats v1.4.2 [411431e0] + Extents v0.1.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v0.10.38 [f2431ed1] + GaussianMixtureAlignment v0.2.2 [14197337] + GenericLinearAlgebra v0.3.15 [68eda718] + GeoFormatTypes v0.4.4 [cf35fbd7] + GeoInterface v1.4.1 ⌅ [5c1252a2] + GeometryBasics v0.4.11 [e91730f6] + Hungarian v0.7.0 [8197267c] + IntervalSets v0.7.10 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 ⌅ [20f20a25] + MakieCore v0.8.12 [e1d29d7a] + Missings v1.2.0 [948c7aac] + MutableConvexHulls v0.2.4 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [b8a86587] + NearestNeighbors v0.4.21 [510215fc] + Observables v0.5.5 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [7a42b37b] + PairedLinkedLists v0.2.2 [d96e819e] + Parameters v0.12.3 [f27b6e38] + Polynomials v4.0.17 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [be4d8f0f] + Quadmath v0.5.11 [94ee1d12] + Quaternions v0.7.6 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [6038ab10] + Rotations v1.7.1 [efcf1570] + Setfield v1.1.1 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 ⌅ [09ab397b] + StructArrays v0.6.21 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [3a884ed6] + UnPack v1.0.2 [5ae413db] + EarCut_jll v2.2.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.1+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 7.21s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 81.98s ################################################################################ # Testing # Testing GaussianMixtureAlignment Status `/tmp/jl_nasiBo/Project.toml` ⌅ [5ae59095] Colors v0.12.11 [150eb455] CoordinateTransformations v0.6.4 [b4f34e82] Distances v0.10.12 [f6369f11] ForwardDiff v0.10.38 [f2431ed1] GaussianMixtureAlignment v0.2.2 [14197337] GenericLinearAlgebra v0.3.15 ⌅ [5c1252a2] GeometryBasics v0.4.11 [e91730f6] Hungarian v0.7.0 [8197267c] IntervalSets v0.7.10 ⌅ [20f20a25] MakieCore v0.8.12 [948c7aac] MutableConvexHulls v0.2.4 [b8a86587] NearestNeighbors v0.4.21 [429524aa] Optim v1.11.0 [7a42b37b] PairedLinkedLists v0.2.2 [ae029012] Requires v1.3.0 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.12 [37e2e46d] LinearAlgebra [8dfed614] Test Status `/tmp/jl_nasiBo/Manifest.toml` [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 ⌅ [3da002f7] ColorTypes v0.11.5 ⌅ [5ae59095] Colors v0.12.11 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [150eb455] CoordinateTransformations v0.6.4 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.3 [497a8b3b] DoubleFloats v1.4.2 [411431e0] Extents v0.1.5 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [53c48c17] FixedPointNumbers v0.8.5 [f6369f11] ForwardDiff v0.10.38 [f2431ed1] GaussianMixtureAlignment v0.2.2 [14197337] GenericLinearAlgebra v0.3.15 [68eda718] GeoFormatTypes v0.4.4 [cf35fbd7] GeoInterface v1.4.1 ⌅ [5c1252a2] GeometryBasics v0.4.11 [e91730f6] Hungarian v0.7.0 [8197267c] IntervalSets v0.7.10 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 [d3d80556] LineSearches v7.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 ⌅ [20f20a25] MakieCore v0.8.12 [e1d29d7a] Missings v1.2.0 [948c7aac] MutableConvexHulls v0.2.4 [d41bc354] NLSolversBase v7.8.3 [77ba4419] NaNMath v1.1.2 [b8a86587] NearestNeighbors v0.4.21 [510215fc] Observables v0.5.5 [429524aa] Optim v1.11.0 [bac558e1] OrderedCollections v1.8.0 [7a42b37b] PairedLinkedLists v0.2.2 [d96e819e] Parameters v0.12.3 [f27b6e38] Polynomials v4.0.17 [85a6dd25] PositiveFactorizations v0.2.4 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [be4d8f0f] Quadmath v0.5.11 [94ee1d12] Quaternions v0.7.6 [c1ae055f] RealDot v0.1.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [6038ab10] Rotations v1.7.1 [efcf1570] Setfield v1.1.1 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 ⌅ [09ab397b] StructArrays v0.6.21 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [3a884ed6] UnPack v1.0.2 [5ae413db] EarCut_jll v2.2.4+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.1+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Test Summary: | Pass Total Time search space bounds | 18 18 3.9s Test Summary: | Pass Total Time divide a searchspace | 14 14 1.5s Test Summary: | Pass Total Time GMM interface | 21 21 2.1s Test Summary: | Pass Total Time bounds for shrinking searchspace around an optimum | 41 41 2.1s Test Summary: | Pass Total Time GOGMA runs without errors | 1 1 1m22.9s Test Summary: | Pass Total Time Evaluation at a point | 2 2 0.6s Test Summary: | Pass Total Time MultiGMMs with interactions | 1 1 7.4s Test Summary: | Pass Total Time Forces | 2 2 6.0s Test Summary: | Pass Total Time GO-ICP and GO-IH run without errors | 2 2 27.4s WARNING: both CoordinateTransformations and GaussianMixtureAlignment export "kabsch"; uses of it in module Main must be qualified Kabsch: Error During Test at /home/pkgeval/.julia/packages/GaussianMixtureAlignment/QPXB6/test/runtests.jl:293 Got exception outside of a @test UndefVarError: `kabsch` not defined Stacktrace: [1] macro expansion @ ~/.julia/packages/GaussianMixtureAlignment/QPXB6/test/runtests.jl:300 [inlined] [2] macro expansion @ /opt/julia/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] [3] top-level scope @ ~/.julia/packages/GaussianMixtureAlignment/QPXB6/test/runtests.jl:294 [4] include(fname::String) @ Base.MainInclude ./client.jl:494 [5] top-level scope @ none:6 [6] eval @ ./boot.jl:385 [inlined] [7] exec_options(opts::Base.JLOptions) @ Base ./client.jl:296 [8] _start() @ Base ./client.jl:557 Test Summary: | Error Total Time Kabsch | 1 1 2.3s ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/GaussianMixtureAlignment/QPXB6/test/runtests.jl:293 Testing failed after 151.46s ERROR: LoadError: Package GaussianMixtureAlignment errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 261.48s: package tests unexpectedly errored