Package evaluation of FaSTLMM on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T10:15:16.802 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.14s ################################################################################ # Installation # Installing FaSTLMM... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [18d3ab0b] + FaSTLMM v0.2.3 Updating `~/.julia/environments/v1.10/Manifest.toml` [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [ffbed154] + DocStringExtensions v0.9.3 [18d3ab0b] + FaSTLMM v0.2.3 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v0.10.38 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 ⌅ [e1d29d7a] + Missings v0.4.5 [d41bc354] + NLSolversBase v7.8.3 [77ba4419] + NaNMath v1.1.2 [429524aa] + Optim v1.11.0 [bac558e1] + OrderedCollections v1.8.0 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [ae029012] + Requires v1.3.0 [efcf1570] + Setfield v1.1.1 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [3a884ed6] + UnPack v1.0.2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.1+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.13s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 32.84s ################################################################################ # Testing # Testing FaSTLMM Status `/tmp/jl_Wo3pMt/Project.toml` [8bb1440f] DelimitedFiles v1.9.1 [18d3ab0b] FaSTLMM v0.2.3 ⌅ [e1d29d7a] Missings v0.4.5 [429524aa] Optim v1.11.0 [37e2e46d] LinearAlgebra [8dfed614] Test Status `/tmp/jl_Wo3pMt/Manifest.toml` [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [ffbed154] DocStringExtensions v0.9.3 [18d3ab0b] FaSTLMM v0.2.3 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 [f6369f11] ForwardDiff v0.10.38 [92d709cd] IrrationalConstants v0.2.4 [692b3bcd] JLLWrappers v1.7.0 [d3d80556] LineSearches v7.3.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 ⌅ [e1d29d7a] Missings v0.4.5 [d41bc354] NLSolversBase v7.8.3 [77ba4419] NaNMath v1.1.2 [429524aa] Optim v1.11.0 [bac558e1] OrderedCollections v1.8.0 [d96e819e] Parameters v0.12.3 [85a6dd25] PositiveFactorizations v0.2.4 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [ae029012] Requires v1.3.0 [efcf1570] Setfield v1.1.1 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [3a884ed6] UnPack v1.0.2 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [9fa8497b] Future [b77e0a4c] InteractiveUtils [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [de0858da] Printf [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.1+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [8e850b90] libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... WARNING: Method definition flmm(Array{Float64, 2}, Array{Float64, 2}, Array{Float64, 1}) in module FaSTLMM at /home/pkgeval/.julia/packages/FaSTLMM/n7kpb/src/lmm.jl:107 overwritten at /home/pkgeval/.julia/packages/FaSTLMM/n7kpb/src/lmm.jl:132. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. WARNING: Method definition flmm(Array{Float64, 2}, Array{Float64, 2}, Array{Float64, 1}) in module FaSTLMM at /home/pkgeval/.julia/packages/FaSTLMM/n7kpb/src/lmm.jl:107 overwritten at /home/pkgeval/.julia/packages/FaSTLMM/n7kpb/src/lmm.jl:132. Testing FaSTLMM tests passed Testing completed after 37.45s PkgEval succeeded after 87.24s