Package evaluation of ClusterEnsembles on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T10:17:31.998 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.03s ################################################################################ # Installation # Installing ClusterEnsembles... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [e493a4bf] + ClusterEnsembles v1.0.0 Updating `~/.julia/environments/v1.10/Manifest.toml` ⌅ [ec485272] + ArnoldiMethod v0.1.0 [fa961155] + CEnum v0.5.0 ⌅ [336ed68f] + CSV v0.8.5 [e493a4bf] + ClusterEnsembles v1.0.0 ⌅ [aaaa29a8] + Clustering v0.14.4 [34da2185] + Compat v4.16.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.4.4 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [b4f34e82] + Distances v0.10.12 [ffbed154] + DocStringExtensions v0.9.3 ⌃ [86223c79] + Graphs v1.9.0 [d25df0c9] + Inflate v0.1.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 ⌅ [2a6221f6] + KaHyPar v0.2.0 [b964fa9f] + LaTeXStrings v1.4.0 [093fc24a] + LightGraphs v1.3.5 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [2679e427] + Metis v1.5.0 [e1d29d7a] + Missings v1.2.0 [b8a86587] + NearestNeighbors v0.4.21 [bac558e1] + OrderedCollections v1.8.0 ⌅ [69de0a69] + Parsers v1.1.2 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [189a3867] + Reexport v1.2.2 [91c51154] + SentinelArrays v1.4.8 [699a6c99] + SimpleTraits v0.9.4 [47aef6b3] + SimpleWeightedGraphs v1.4.0 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.1 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [892a3eda] + StringManipulation v0.4.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [87a0c12d] + KaHyPar_jll v1.3.3+0 [d00139f3] + METIS_jll v5.1.3+0 ⌅ [28df3c45] + boost_jll v1.76.0+1 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [9fa8497b] + Future [b77e0a4c] + InteractiveUtils [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 5.85s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 38.91s ################################################################################ # Testing # Testing ClusterEnsembles Status `/tmp/jl_HwqHfC/Project.toml` ⌅ [336ed68f] CSV v0.8.5 [e493a4bf] ClusterEnsembles v1.0.0 ⌅ [aaaa29a8] Clustering v0.14.4 ⌃ [a93c6f00] DataFrames v1.4.4 [b4f34e82] Distances v0.10.12 ⌅ [2a6221f6] KaHyPar v0.2.0 [093fc24a] LightGraphs v1.3.5 [2679e427] Metis v1.5.0 [47aef6b3] SimpleWeightedGraphs v1.4.0 [37e2e46d] LinearAlgebra [9a3f8284] Random [2f01184e] SparseArrays v1.10.0 [8dfed614] Test Status `/tmp/jl_HwqHfC/Manifest.toml` ⌅ [ec485272] ArnoldiMethod v0.1.0 [fa961155] CEnum v0.5.0 ⌅ [336ed68f] CSV v0.8.5 [e493a4bf] ClusterEnsembles v1.0.0 ⌅ [aaaa29a8] Clustering v0.14.4 [34da2185] Compat v4.16.0 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 ⌃ [a93c6f00] DataFrames v1.4.4 [864edb3b] DataStructures v0.18.20 [e2d170a0] DataValueInterfaces v1.0.0 [b4f34e82] Distances v0.10.12 [ffbed154] DocStringExtensions v0.9.3 ⌃ [86223c79] Graphs v1.9.0 [d25df0c9] Inflate v0.1.5 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 ⌅ [2a6221f6] KaHyPar v0.2.0 [b964fa9f] LaTeXStrings v1.4.0 [093fc24a] LightGraphs v1.3.5 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 [2679e427] Metis v1.5.0 [e1d29d7a] Missings v1.2.0 [b8a86587] NearestNeighbors v0.4.21 [bac558e1] OrderedCollections v1.8.0 ⌅ [69de0a69] Parsers v1.1.2 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [189a3867] Reexport v1.2.2 [91c51154] SentinelArrays v1.4.8 [699a6c99] SimpleTraits v0.9.4 [47aef6b3] SimpleWeightedGraphs v1.4.0 [66db9d55] SnoopPrecompile v1.0.3 [a2af1166] SortingAlgorithms v1.2.1 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 ⌅ [2913bbd2] StatsBase v0.33.21 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [87a0c12d] KaHyPar_jll v1.3.3+0 [d00139f3] METIS_jll v5.1.3+0 ⌅ [28df3c45] boost_jll v1.76.0+1 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [9fa8497b] Future [b77e0a4c] InteractiveUtils [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [1a1011a3] SharedArrays [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Tests for ClusterEnsembles.jl * set_nclass -- OK * hbgf -- OK * nmf -- OK * cspa -- ERROR: LoadError: MethodError: no method matching unsafe_convert(::Type{Ptr{Int32}}, ::Int32) Closest candidates are: unsafe_convert(::Type{Ptr{T}}, !Matched::Array{T}) where T @ Base pointer.jl:65 unsafe_convert(::Type{Ptr{T}}, !Matched::Base.ReshapedArray{T}) where T @ Base reshapedarray.jl:299 unsafe_convert(::Type{Ptr{T}}, !Matched::Base.RefValue{FA}) where {N, T, D, FA<:StaticArraysCore.FieldArray{N, T, D}} @ StaticArrays ~/.julia/packages/StaticArrays/2dZx4/src/FieldArray.jl:20 ... Stacktrace: [1] METIS_PartGraphRecursive(nvtxs::Int32, ncon::Int32, xadj::Vector{Int32}, adjncy::Vector{Int32}, vwgt::Vector{Int32}, vsize::Ptr{Nothing}, adjwgt::Vector{Int32}, nparts::Int32, tpwgts::Ptr{Nothing}, ubvec::Ptr{Nothing}, options::Vector{Int32}, edgecut::Vector{Int32}, part::Vector{Int32}) @ Metis.LibMetis ~/.julia/packages/Metis/rg9xr/lib/LibMetis.jl:13 [2] partition(G::ClusterEnsembles.SWGraph, nparts::Int64; alg::Symbol) @ ClusterEnsembles ~/.julia/packages/ClusterEnsembles/0qp8G/src/metis_patch.jl:58 [3] partition(G::SimpleWeightedGraphs.SimpleWeightedGraph{Int64, Float64}, nparts::Int64; alg::Symbol) @ ClusterEnsembles ~/.julia/packages/ClusterEnsembles/0qp8G/src/metis_patch.jl:50 [4] cspa(labels::Matrix{Union{Missing, Int64}}, nclass::Int64) @ ClusterEnsembles ~/.julia/packages/ClusterEnsembles/0qp8G/src/ClusterEnsembles.jl:57 [5] cluster_ensembles(labels::Matrix{Union{Missing, Int64}}; nclass::Nothing, random_state::Int64, alg::Symbol) @ ClusterEnsembles ~/.julia/packages/ClusterEnsembles/0qp8G/src/ClusterEnsembles.jl:238 [6] top-level scope @ ~/.julia/packages/ClusterEnsembles/0qp8G/test/runtests.jl:33 [7] include(fname::String) @ Base.MainInclude ./client.jl:494 [8] top-level scope @ none:6 in expression starting at /home/pkgeval/.julia/packages/ClusterEnsembles/0qp8G/test/runtests.jl:31 Testing failed after 133.53s ERROR: LoadError: Package ClusterEnsembles errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 193.93s: package tests unexpectedly errored