Package evaluation of ClimateTasks on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T13:23:03.151 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.34s ################################################################################ # Installation # Installing ClimateTasks... Resolving package versions... Installed Conda ── v1.10.2 Installed NetCDF ─ v0.10.3 Installed HDF5 ─── v0.13.7 Updating `~/.julia/environments/v1.10/Project.toml` [1a49d507] + ClimateTasks v0.1.1 Updating `~/.julia/environments/v1.10/Manifest.toml` [9e28174c] + BinDeps v1.0.2 [a74b3585] + Blosc v0.7.3 [81a5f4ea] + CatViews v1.0.0 [1a49d507] + ClimateTasks v0.1.1 [19ecbf4d] + Codecs v0.5.0 ⌅ [34da2185] + Compat v2.2.1 [8f4d0f93] + Conda v1.10.2 [a9693cdc] + CondaBinDeps v0.2.0 [8bb1440f] + DelimitedFiles v1.9.1 ⌅ [3c3547ce] + DiskArrays v0.2.13 [b4f34e82] + Distances v0.10.12 [aaf54ef3] + DistributedArrays v0.6.7 [5789e2e9] + FileIO v1.16.6 [59287772] + Formatting v0.4.3 ⌅ [c58ffaec] + FortranFiles v0.5.0 ⌅ [f67ccb44] + HDF5 v0.13.7 [18e54dd8] + IntegerMathUtils v0.1.2 ⌅ [4138dd39] + JLD v0.9.2 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 ⌅ [1b4a561d] + LegacyStrings v0.4.1 ⌅ [62725fbc] + MITgcmTools v0.1.5 ⌅ [cb8c808f] + MeshArrays v0.2.41 [b8a86587] + NearestNeighbors v0.4.21 ⌅ [30363a11] + NetCDF v0.10.3 [69de0a69] + Parsers v2.8.1 [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [27ebfcd6] + Primes v0.5.6 [ae029012] + Requires v1.3.0 [90137ffa] + StaticArrays v1.9.12 [1e83bf80] + StaticArraysCore v1.4.3 [82ae8749] + StatsAPI v1.7.0 [30578b45] + URIParser v0.4.1 [1986cc42] + Unitful v1.22.0 [81def892] + VersionParsing v1.3.0 ⌅ [ddb6d928] + YAML v0.3.2 [0b7ba130] + Blosc_jll v1.21.6+2 ⌅ [0234f1f7] + HDF5_jll v1.10.5+7 [5ced341a] + Lz4_jll v1.10.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [0dad84c5] + ArgTools v1.1.1 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching [b77e0a4c] + InteractiveUtils [4af54fe1] + LazyArtifacts [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [56ddb016] + Logging [d6f4376e] + Markdown [a63ad114] + Mmap [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.10.0 [de0858da] + Printf [3fa0cd96] + REPL [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [1a1011a3] + SharedArrays [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.4.0+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [14a3606d] + MozillaCACerts_jll v2023.1.10 [4536629a] + OpenBLAS_jll v0.3.23+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.52.0+1 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building Conda ─→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building NetCDF → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/dda7b49694d15d7d1a1ba1d7c2a9142777028bd5/build.log` Building HDF5 ──→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0b812e7872e2199a5a04944f486b4048944f1ed8/build.log` Installation completed after 196.7s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 60.37s ################################################################################ # Testing # Testing ClimateTasks Status `/tmp/jl_ry9BV5/Project.toml` [1a49d507] ClimateTasks v0.1.1 [8dfed614] Test Status `/tmp/jl_ry9BV5/Manifest.toml` [9e28174c] BinDeps v1.0.2 [a74b3585] Blosc v0.7.3 [81a5f4ea] CatViews v1.0.0 [1a49d507] ClimateTasks v0.1.1 [19ecbf4d] Codecs v0.5.0 ⌅ [34da2185] Compat v2.2.1 [8f4d0f93] Conda v1.10.2 [a9693cdc] CondaBinDeps v0.2.0 [8bb1440f] DelimitedFiles v1.9.1 ⌅ [3c3547ce] DiskArrays v0.2.13 [b4f34e82] Distances v0.10.12 [aaf54ef3] DistributedArrays v0.6.7 [5789e2e9] FileIO v1.16.6 [59287772] Formatting v0.4.3 ⌅ [c58ffaec] FortranFiles v0.5.0 ⌅ [f67ccb44] HDF5 v0.13.7 [18e54dd8] IntegerMathUtils v0.1.2 ⌅ [4138dd39] JLD v0.9.2 [692b3bcd] JLLWrappers v1.7.0 [682c06a0] JSON v0.21.4 ⌅ [1b4a561d] LegacyStrings v0.4.1 ⌅ [62725fbc] MITgcmTools v0.1.5 ⌅ [cb8c808f] MeshArrays v0.2.41 [b8a86587] NearestNeighbors v0.4.21 ⌅ [30363a11] NetCDF v0.10.3 [69de0a69] Parsers v2.8.1 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [27ebfcd6] Primes v0.5.6 [ae029012] Requires v1.3.0 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [30578b45] URIParser v0.4.1 [1986cc42] Unitful v1.22.0 [81def892] VersionParsing v1.3.0 ⌅ [ddb6d928] YAML v0.3.2 [0b7ba130] Blosc_jll v1.21.6+2 ⌅ [0234f1f7] HDF5_jll v1.10.5+7 [5ced341a] Lz4_jll v1.10.1+0 [3161d3a3] Zstd_jll v1.5.7+1 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [a63ad114] Mmap [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [1a1011a3] SharedArrays [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Cloning into 'MITgcm'... 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OK (COMMAND='./mitgcmuv > output.txt') creating the comparison code (using CC=cc)... OK skipping mpack build default 10 ----T----- ----S----- ----U----- ----V----- --PTR 01-- --PTR 02-- --PTR 03-- --PTR 04-- --PTR 05-- G D M c m s m s m s m s m s m s m s m s m s e p a R g m m e . m m e . m m e . m m e . m m e . m m e . m m e . m m e . m m e . n n k u 2 i a a d i a a d i a a d i a a d i a a d i a a d i a a d i a a d i a a d 2 d e n d n x n . n x n . n x n . n x n . n x n . n x n . n x n . n x n . n x n . ------------------------------------------------------------------------------- Experiment: hs94.cs-32x32x5 ; extra_runs= impIGW genmake ... head: cannot open 'Makefile' for reading: No such file or directory === Searching for possible settings for OPTFILE === The platform appears to be: linux_amd64 Error: No Fortran compilers were found in your path. Please specify one using: 1) an "optfile" on (eg. "-optfile=path/to/OPTFILE"), 2) a command-line option (eg. "-fc NAME"), or 3) the FC or MITGCM_FC environment variables. genmakemodel: genmake failed cp: cannot stat 'genmake_*': No such file or directory clean run-dir ... successful linkdata from dirs: input.impIGW input ldir=input.impIGW: data data.diagnostics data.pkg data.shap eedata.mth pickup.0000025920 pickup.0000025920.meta pickup_nh.0000025920 prepare_run ; link files: dxC1_dXYa.face001.bin dxC1_dXYa.face002.bin dxC1_dXYa.face003.bin dxC1_dXYa.face004.bin dxC1_dXYa.face005.bin dxC1_dXYa.face006.bin from dir: ../../fizhi-cs-32x32x40/input ldir=input: data.mnc eedata ; link files: tile001.mitgrid tile002.mitgrid tile003.mitgrid tile004.mitgrid tile005.mitgrid tile006.mitgrid from dir: ../../aim.5l_cs/input runmodel in hs94.cs-32x32x5/tr_run.impIGW ... failed (run: 8 end: -1 ) => output from running in hs94.cs-32x32x5/tr_run.impIGW : > no executable: mitgcmuv ------------------------------------------------------------------------------- No results email was sent. Tue Feb 25 13:29:50 UTC 2025 run: ./testreport -t hs94.cs-32x32x5 on : Linux ClimateTasks-primary-WGU77JFC 6.8.0-49-generic #49-Ubuntu SMP PREEMPT_DYNAMIC Mon Nov 4 02:06:24 UTC 2024 x86_64 GNU/Linux No "OPTFILE" was specified ; genmake2 found and uses: default 10 ----T----- ----S----- ----U----- ----V----- --PTR 01-- --PTR 02-- --PTR 03-- --PTR 04-- --PTR 05-- G D M c m s m s m s m s m s m s m s m s m s e p a R g m m e . m m e . m m e . m m e . m m e . m m e . m m e . m m e . m m e . n n k u 2 i a a d i a a d i a a d i a a d i a a d i a a d i a a d i a a d i a a d 2 d e n d n x n . n x n . n x n . n x n . n x n . n x n . n x n . n x n . n x n . N N N N .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. . . . . . . . . N/O hs94.cs-32x32x5 N N N N .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. .. . . . . . . . . N/O hs94.cs-32x32x5.impIGW Start time: Tue Feb 25 13:29:50 UTC 2025 End time: Tue Feb 25 13:29:51 UTC 2025 ======== End of testreport execution ======== Test Summary: | Time ClimateTasks.jl | None 2m11.8s Testing ClimateTasks tests passed Testing completed after 59.15s PkgEval succeeded after 441.55s