Package evaluation of BaytesSMC on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T09:30:32.962


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.14s


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# Installation
#

Installing BaytesSMC...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [2428e3a5] + BaytesSMC v0.3.6
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [7d9f7c33] + Accessors v0.1.41
  [79e6a3ab] + Adapt v4.2.0
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.4.0
  [e5a8efeb] + BaytesCore v0.2.0
  [12a76ff9] + BaytesDiff v0.3.1
  [26b78818] + BaytesFilters v0.3.6
  [8e6e46a0] + BaytesMCMC v0.3.4
  [c78c806d] + BaytesOptim v0.1.9
  [c4a8eb41] + BaytesPMCMC v0.3.3
  [2428e3a5] + BaytesSMC v0.3.6
⌅ [76274a88] + Bijectors v0.13.18
  [082447d4] + ChainRules v1.72.2
  [d360d2e6] + ChainRulesCore v1.25.1
  [9e997f8a] + ChangesOfVariables v0.1.9
  [38540f10] + CommonSolve v0.2.4
  [34da2185] + Compat v4.16.0
  [a33af91c] + CompositionsBase v0.1.2
  [187b0558] + ConstructionBase v1.5.8
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [31c24e10] + Distributions v0.25.117
  [ffbed154] + DocStringExtensions v0.9.3
  [fdbdab4c] + ElasticArrays v1.2.12
  [1a297f60] + FillArrays v1.13.0
⌅ [d9f16b24] + Functors v0.4.12
  [46192b85] + GPUArraysCore v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.27
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.15
  [dbb5928d] + MappedArrays v0.4.2
  [e1d29d7a] + Missings v1.2.0
  [44c54197] + ModelWrappers v0.5.6
  [bac558e1] + OrderedCollections v1.8.0
  [90014a1f] + PDMats v0.11.32
  [21216c6a] + Preferences v1.4.3
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [c1ae055f] + RealDot v0.1.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [79098fc4] + Rmath v0.8.0
  [f2b01f46] + Roots v2.2.5
  [ce78b400] + SimpleUnPack v1.1.0
  [a2af1166] + SortingAlgorithms v1.2.1
  [dc90abb0] + SparseInverseSubset v0.1.2
  [276daf66] + SpecialFunctions v2.5.0
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.3.2
  [09ab397b] + StructArrays v0.7.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [56f22d72] + Artifacts
  [2a0f44e3] + Base64
  [ade2ca70] + Dates
  [8ba89e20] + Distributed
  [b77e0a4c] + InteractiveUtils
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [d6f4376e] + Markdown
  [ca575930] + NetworkOptions v1.2.0
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization
  [6462fe0b] + Sockets
  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 9.21s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 20.12s


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# Testing
#

     Testing BaytesSMC
      Status `/tmp/jl_XbRkeW/Project.toml`
  [dce04be8] ArgCheck v2.4.0
  [e5a8efeb] BaytesCore v0.2.0
  [12a76ff9] BaytesDiff v0.3.1
  [26b78818] BaytesFilters v0.3.6
  [8e6e46a0] BaytesMCMC v0.3.4
  [c78c806d] BaytesOptim v0.1.9
  [c4a8eb41] BaytesPMCMC v0.3.3
  [2428e3a5] BaytesSMC v0.3.6
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [f6369f11] ForwardDiff v0.10.38
  [44c54197] ModelWrappers v0.5.6
  [d41bc354] NLSolversBase v7.8.3
  [429524aa] Optim v1.11.0
  [ce78b400] SimpleUnPack v1.1.0
  [9a3f8284] Random
  [10745b16] Statistics v1.10.0
  [8dfed614] Test
      Status `/tmp/jl_XbRkeW/Manifest.toml`
  [7d9f7c33] Accessors v0.1.41
  [79e6a3ab] Adapt v4.2.0
  [66dad0bd] AliasTables v1.1.3
  [dce04be8] ArgCheck v2.4.0
  [4fba245c] ArrayInterface v7.18.0
  [e5a8efeb] BaytesCore v0.2.0
  [12a76ff9] BaytesDiff v0.3.1
  [26b78818] BaytesFilters v0.3.6
  [8e6e46a0] BaytesMCMC v0.3.4
  [c78c806d] BaytesOptim v0.1.9
  [c4a8eb41] BaytesPMCMC v0.3.3
  [2428e3a5] BaytesSMC v0.3.6
⌅ [76274a88] Bijectors v0.13.18
  [082447d4] ChainRules v1.72.2
  [d360d2e6] ChainRulesCore v1.25.1
  [9e997f8a] ChangesOfVariables v0.1.9
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.16.0
  [a33af91c] CompositionsBase v0.1.2
  [187b0558] ConstructionBase v1.5.8
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [fdbdab4c] ElasticArrays v1.2.12
  [1a297f60] FillArrays v1.13.0
  [6a86dc24] FiniteDiff v2.27.0
  [f6369f11] ForwardDiff v0.10.38
⌅ [d9f16b24] Functors v0.4.12
  [46192b85] GPUArraysCore v0.2.0
  [34004b35] HypergeometricFunctions v0.3.27
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [d3d80556] LineSearches v7.3.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.15
  [dbb5928d] MappedArrays v0.4.2
  [e1d29d7a] Missings v1.2.0
  [44c54197] ModelWrappers v0.5.6
  [d41bc354] NLSolversBase v7.8.3
  [77ba4419] NaNMath v1.1.2
  [429524aa] Optim v1.11.0
  [bac558e1] OrderedCollections v1.8.0
  [90014a1f] PDMats v0.11.32
  [d96e819e] Parameters v0.12.3
  [85a6dd25] PositiveFactorizations v0.2.4
  [21216c6a] Preferences v1.4.3
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [c1ae055f] RealDot v0.1.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [79098fc4] Rmath v0.8.0
  [f2b01f46] Roots v2.2.5
  [efcf1570] Setfield v1.1.1
  [ce78b400] SimpleUnPack v1.1.0
  [a2af1166] SortingAlgorithms v1.2.1
  [dc90abb0] SparseInverseSubset v0.1.2
  [276daf66] SpecialFunctions v2.5.0
  [1e83bf80] StaticArraysCore v1.4.3
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.3.2
  [09ab397b] StructArrays v0.7.0
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [3a884ed6] UnPack v1.0.2
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [8ba89e20] Distributed
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
  [76f85450] LibGit2
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [ca575930] NetworkOptions v1.2.0
  [de0858da] Printf
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [6462fe0b] Sockets
  [2f01184e] SparseArrays v1.10.0
  [10745b16] Statistics v1.10.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [4536629a] OpenBLAS_jll v0.3.23+4
  [05823500] OpenLibm_jll v0.8.1+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Warning: Number of θ particles is no multiple of available number of threads.
SMC algorithm with jitter kernel MCMC Diagnostics:
Sampler finished after 100 iterations with average acceptance ratio of 100.0%.
Initial average ℓlikelihood per particle: -3738.1, variance: 0.01
Final average ℓlikelihood per particle: -3738.1, variance: 0.01
Total number of jittering steps: 0.
Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel MCMC Diagnostics:
Sampler finished after 100 iterations with average acceptance ratio of 100.0%.
Initial average ℓlikelihood per particle: -3738.03, variance: 0.04
Final average ℓlikelihood per particle: -3738.03, variance: 0.04
Total number of jittering steps: 0.
Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel PMCMC Diagnostics:
Sampler finished after 100 iterations with average acceptance ratio of 100.0%.
Initial average ℓlikelihood per particle: -228.17, variance: 1062.06
Final average ℓlikelihood per particle: -228.17, variance: 1062.06
Total number of jittering steps: 0.
Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel MCMC Diagnostics:
Sampler finished after 949 iterations with average acceptance ratio of 99.58%.
Initial average ℓlikelihood per particle: -204.97, variance: 0.38
Final average ℓlikelihood per particle: -3734.0, variance: 0.01
Total number of jittering steps: 20.
Rejuvenations on average every 237.25 step, every 118.5 steps in first half, every Inf steps in second half.
Quantiles for average rejuvenation correlation of parameter: [-0.06, 0.2, 0.59, 0.69, 0.74].
Quantiles for average number rejuvenation steps: [1.3, 1.6, 4.5, 8.2, 9.1].
Quantiles for ESS: [3.37, 3.62, 3.86, 3.98, 3.99] for 4 chains.
SMC algorithm with jitter kernel MCMC Diagnostics:
Sampler finished after 949 iterations with average acceptance ratio of 99.37%.
Initial average ℓlikelihood per particle: -204.98, variance: 0.17
Final average ℓlikelihood per particle: -3734.37, variance: 0.15
Total number of jittering steps: 19.
Rejuvenations on average every 158.17 step, every 94.8 steps in first half, every 475.0 steps in second half.
Quantiles for average rejuvenation correlation of parameter: [-0.12, -0.09, 0.42, 0.7, 0.76].
Quantiles for average number rejuvenation steps: [1.0, 1.0, 2.0, 3.0, 6.5].
Quantiles for ESS: [3.18, 3.29, 3.58, 3.96, 3.98] for 4 chains.
SMC algorithm with jitter kernel Optimizer Diagnostics:
Sampler finished after 100 iterations with average acceptance ratio of 100.0%.
Initial average ℓlikelihood per particle: -206.82, variance: 0.0
Final average ℓlikelihood per particle: -206.82, variance: 0.0
Total number of jittering steps: 0.
Rejuvenations on average every Inf step, every Inf steps in first half, every Inf steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel Optimizer Diagnostics:
Sampler finished after 949 iterations with average acceptance ratio of 0.0%.
Initial average ℓlikelihood per particle: -204.3, variance: 0.0
Final average ℓlikelihood per particle: -3733.93, variance: 0.0
Total number of jittering steps: 4745.
Rejuvenations on average every 1.0 step, every 1.0 steps in first half, every 1.0 steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel Optimizer Diagnostics:
Sampler finished after 949 iterations with average acceptance ratio of 0.0%.
Initial average ℓlikelihood per particle: -204.3, variance: 0.0
Final average ℓlikelihood per particle: -3733.93, variance: 0.0
Total number of jittering steps: 4745.
Rejuvenations on average every 1.0 step, every 1.0 steps in first half, every 1.0 steps in second half.
Quantiles for ESS: [4.0, 4.0, 4.0, 4.0, 4.0] for 4 chains.
SMC algorithm with jitter kernel SMC2Kernel Diagnostics:
Sampler finished after 100 iterations with average acceptance ratio of 97.0%.
Initial average ℓlikelihood per particle: -158.69, variance: 6.72
Final average ℓlikelihood per particle: -322.08, variance: 1.35
Total number of jittering steps: 13.
Rejuvenations on average every 33.33 step, every 50.0 steps in first half, every 25.0 steps in second half.
Quantiles for average rejuvenation correlation of parameter: [0.22, 0.25, 0.34, 0.46, 0.49].
Quantiles for average number rejuvenation steps: [2.6, 3.2, 5.0, 5.6, 5.8].
Quantiles for ESS: [3.33, 3.47, 3.74, 3.91, 3.97] for 4 chains.
Test Summary: | Pass  Total     Time
All tests     |   39     39  1m55.4s
     Testing BaytesSMC tests passed 

Testing completed after 203.52s

PkgEval succeeded after 249.88s