Package evaluation of BaytesDiff on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T08:54:59.364 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 5.3s ################################################################################ # Installation # Installing BaytesDiff... Resolving package versions... Updating `~/.julia/environments/v1.10/Project.toml` [12a76ff9] + BaytesDiff v0.3.1 Updating `~/.julia/environments/v1.10/Manifest.toml` [7d9f7c33] + Accessors v0.1.41 [79e6a3ab] + Adapt v4.2.0 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.4.0 [e5a8efeb] + BaytesCore v0.2.0 [12a76ff9] + BaytesDiff v0.3.1 ⌅ [76274a88] + Bijectors v0.13.18 [082447d4] + ChainRules v1.72.2 [d360d2e6] + ChainRulesCore v1.25.1 [9e997f8a] + ChangesOfVariables v0.1.9 [38540f10] + CommonSolve v0.2.4 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.20 [e2d170a0] + DataValueInterfaces v1.0.0 [31c24e10] + Distributions v0.25.117 [ffbed154] + DocStringExtensions v0.9.3 [1a297f60] + FillArrays v1.13.0 ⌅ [d9f16b24] + Functors v0.4.12 [46192b85] + GPUArraysCore v0.2.0 [34004b35] + HypergeometricFunctions v0.3.27 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.15 [dbb5928d] + MappedArrays v0.4.2 [e1d29d7a] + Missings v1.2.0 [44c54197] + ModelWrappers v0.5.6 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.32 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.0 [79098fc4] + Rmath v0.8.0 [f2b01f46] + Roots v2.2.5 [ce78b400] + SimpleUnPack v1.1.0 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.0 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [09ab397b] + StructArrays v0.7.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts [2a0f44e3] + Base64 [ade2ca70] + Dates [8ba89e20] + Distributed [b77e0a4c] + InteractiveUtils [76f85450] + LibGit2 [8f399da3] + Libdl [37e2e46d] + LinearAlgebra [d6f4376e] + Markdown [ca575930] + NetworkOptions v1.2.0 [de0858da] + Printf [9a3f8284] + Random [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization [6462fe0b] + Sockets [2f01184e] + SparseArrays v1.10.0 [10745b16] + Statistics v1.10.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs [4ec0a83e] + Unicode [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [e37daf67] + LibGit2_jll v1.6.4+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.2+1 [4536629a] + OpenBLAS_jll v0.3.23+4 [05823500] + OpenLibm_jll v0.8.1+4 [bea87d4a] + SuiteSparse_jll v7.2.1+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.15s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.9/activate_set.jl:63 Precompiling package dependencies... Precompilation completed after 757.23s ################################################################################ # Testing # Testing BaytesDiff ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1829 Status `/tmp/jl_2U6lQU/Project.toml` [dce04be8] ArgCheck v2.4.0 [e5a8efeb] BaytesCore v0.2.0 [12a76ff9] BaytesDiff v0.3.1 [163ba53b] DiffResults v1.1.0 [31c24e10] Distributions v0.25.117 [ffbed154] DocStringExtensions v0.9.3 ⌅ [7da242da] Enzyme v0.11.20 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v0.10.38 [44c54197] ModelWrappers v0.5.6 [90014a1f] PDMats v0.11.32 [37e2e3b7] ReverseDiff v1.15.3 [ce78b400] SimpleUnPack v1.1.0 ⌅ [e88e6eb3] Zygote v0.6.75 [37e2e46d] LinearAlgebra [9a3f8284] Random [8dfed614] Test Status `/tmp/jl_2U6lQU/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.41 [79e6a3ab] Adapt v4.2.0 [66dad0bd] AliasTables v1.1.3 [dce04be8] ArgCheck v2.4.0 [e5a8efeb] BaytesCore v0.2.0 [12a76ff9] BaytesDiff v0.3.1 ⌅ [76274a88] Bijectors v0.13.16 [fa961155] CEnum v0.5.0 [082447d4] ChainRules v1.72.2 [d360d2e6] ChainRulesCore v1.25.1 [9e997f8a] ChangesOfVariables v0.1.9 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.5.8 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.20 [e2d170a0] DataValueInterfaces v1.0.0 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [31c24e10] Distributions v0.25.117 [ffbed154] DocStringExtensions v0.9.3 ⌅ [7da242da] Enzyme v0.11.20 ⌅ [f151be2c] EnzymeCore v0.6.6 [e2ba6199] ExprTools v0.1.10 [1a297f60] FillArrays v1.13.0 [26cc04aa] FiniteDifferences v0.12.32 [f6369f11] ForwardDiff v0.10.38 [069b7b12] FunctionWrappers v1.1.3 ⌅ [d9f16b24] Functors v0.4.12 ⌃ [0c68f7d7] GPUArrays v10.3.1 ⌅ [46192b85] GPUArraysCore v0.1.6 ⌅ [61eb1bfa] GPUCompiler v0.25.0 [34004b35] HypergeometricFunctions v0.3.27 [7869d1d1] IRTools v0.4.14 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [692b3bcd] JLLWrappers v1.7.0 ⌅ [929cbde3] LLVM v6.6.3 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.15 [dbb5928d] MappedArrays v0.4.2 [e1d29d7a] Missings v1.2.0 [44c54197] ModelWrappers v0.5.6 [77ba4419] NaNMath v1.1.2 [d8793406] ObjectFile v0.4.3 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.32 [aea7be01] PrecompileTools v1.2.1 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 ⌃ [1fd47b50] QuadGK v2.10.1 [c1ae055f] RealDot v0.1.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.0 [37e2e3b7] ReverseDiff v1.15.3 [708f8203] Richardson v1.4.2 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.5 [6c6a2e73] Scratch v1.2.1 [ce78b400] SimpleUnPack v1.1.0 [a2af1166] SortingAlgorithms v1.2.1 [dc90abb0] SparseInverseSubset v0.1.2 [276daf66] SpecialFunctions v2.5.0 [90137ffa] StaticArrays v1.9.12 [1e83bf80] StaticArraysCore v1.4.3 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.3.2 ⌃ [09ab397b] StructArrays v0.6.18 [53d494c1] StructIO v0.3.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [a759f4b9] TimerOutputs v0.5.27 ⌅ [e88e6eb3] Zygote v0.6.75 [700de1a5] ZygoteRules v0.2.7 ⌅ [7cc45869] Enzyme_jll v0.0.102+0 ⌅ [dad2f222] LLVMExtra_jll v0.0.29+0 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [0dad84c5] ArgTools v1.1.1 [56f22d72] Artifacts [2a0f44e3] Base64 [ade2ca70] Dates [8ba89e20] Distributed [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching [b77e0a4c] InteractiveUtils [4af54fe1] LazyArtifacts [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 [8f399da3] Libdl [37e2e46d] LinearAlgebra [56ddb016] Logging [d6f4376e] Markdown [ca575930] NetworkOptions v1.2.0 [44cfe95a] Pkg v1.10.0 [de0858da] Printf [3fa0cd96] REPL [9a3f8284] Random [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization [6462fe0b] Sockets [2f01184e] SparseArrays v1.10.0 [10745b16] Statistics v1.10.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test [cf7118a7] UUIDs [4ec0a83e] Unicode [e66e0078] CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] LibCURL_jll v8.4.0+0 [e37daf67] LibGit2_jll v1.6.4+0 [29816b5a] LibSSH2_jll v1.11.0+1 [c8ffd9c3] MbedTLS_jll v2.28.2+1 [14a3606d] MozillaCACerts_jll v2023.1.10 [4536629a] OpenBLAS_jll v0.3.23+4 [05823500] OpenLibm_jll v0.8.1+4 [bea87d4a] SuiteSparse_jll v7.2.1+1 [83775a58] Zlib_jll v1.2.13+1 [8e850b90] libblastrampoline_jll v5.11.0+0 [8e850ede] nghttp2_jll v1.52.0+1 [3f19e933] p7zip_jll v17.4.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. Testing Running tests... Attribute 'nocapture' applied to incompatible type! call void (...) @llvm.enzyme.sret_use([2 x [2 x double]*] nocapture %20), !dbg !1388 julia: /source/src/llvm-alloc-opt.cpp:1265: bool {anonymous}::AllocOpt::runOnFunction(llvm::Function&, llvm::function_ref): Assertion `!verifyFunction(F, &errs())' failed. [351] signal (6.-6): Aborted in expression starting at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/test/test-differentiation.jl:492 unknown function (ip: 0x7c68414f0ebc) gsignal at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) abort at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x7c684148c394) __assert_fail at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) runOnFunction at /source/src/llvm-alloc-opt.cpp:1265 runOnFunction at /source/src/llvm-alloc-opt.cpp:1280 _ZN4llvm13FPPassManager13runOnFunctionERNS_8FunctionE at /opt/julia/bin/../lib/julia/libLLVM-15jl.so (unknown line) _ZN4llvm13FPPassManager11runOnModuleERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-15jl.so (unknown line) _ZN4llvm6legacy15PassManagerImpl3runERNS_6ModuleE at /opt/julia/bin/../lib/julia/libLLVM-15jl.so (unknown line) LLVMRunPassManager at /opt/julia/bin/../lib/julia/libLLVM-15jl.so (unknown line) LLVMRunPassManager at /home/pkgeval/.julia/packages/LLVM/bzSzE/lib/15/libLLVM.jl:3352 [inlined] run! at /home/pkgeval/.julia/packages/LLVM/bzSzE/src/passmanager.jl:39 [inlined] #420 at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler/optimize.jl:1393 #ModulePassManager#51 at /home/pkgeval/.julia/packages/LLVM/bzSzE/src/passmanager.jl:33 ModulePassManager at /home/pkgeval/.julia/packages/LLVM/bzSzE/src/passmanager.jl:30 [inlined] removeDeadArgs! at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler/optimize.jl:1389 post_optimze! at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler/optimize.jl:1676 post_optimze! at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler/optimize.jl:1675 unknown function (ip: 0x7c6823c309d0) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 _thunk at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler.jl:5448 _thunk at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler.jl:5430 [inlined] cached_compilation at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler.jl:5464 [inlined] #532 at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler.jl:5530 JuliaContext at /home/pkgeval/.julia/packages/GPUCompiler/U36Ed/src/driver.jl:47 unknown function (ip: 0x7c6823d3fdf5) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 #s1883#531 at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/compiler.jl:5482 [inlined] #s1883#531 at ./none:0 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 GeneratedFunctionStub at ./boot.jl:602 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_call_staged at /source/src/method.c:540 ijl_code_for_staged at /source/src/method.c:593 get_staged at ./compiler/utilities.jl:123 retrieve_code_info at ./compiler/utilities.jl:135 [inlined] InferenceState at ./compiler/inferencestate.jl:430 typeinf_ext at ./compiler/typeinfer.jl:1049 typeinf_ext_toplevel at ./compiler/typeinfer.jl:1082 typeinf_ext_toplevel at ./compiler/typeinfer.jl:1078 jfptr_typeinf_ext_toplevel_35711.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] jl_type_infer at /source/src/gf.c:394 jl_generate_fptr_impl at /source/src/jitlayers.cpp:512 jl_compile_method_internal at /source/src/gf.c:2481 [inlined] jl_compile_method_internal at /source/src/gf.c:2368 _jl_invoke at /source/src/gf.c:2887 [inlined] ijl_apply_generic at /source/src/gf.c:3077 autodiff at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/Enzyme.jl:322 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 autodiff at /home/pkgeval/.julia/packages/Enzyme/l4FS0/src/Enzyme.jl:224 [inlined] _log_density_and_gradient at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/ext/BaytesDiffEnzymeExt.jl:48 _log_density_and_gradient at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/src/Differentiation/automatic/automatic.jl:67 [inlined] log_density_and_gradient at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/src/Differentiation/results.jl:77 log_density_and_gradient at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/src/Differentiation/diffobjective.jl:35 unknown function (ip: 0x7c68230d5d99) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 macro expansion at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/test/test-differentiation.jl:511 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.10/Test/src/Test.jl:1577 [inlined] top-level scope at /home/pkgeval/.julia/packages/BaytesDiff/C8qKE/test/test-differentiation.jl:494 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_invoke at /source/src/gf.c:2902 jl_toplevel_eval_flex at /source/src/toplevel.c:925 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] include_string at ./loading.jl:2146 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 _include at ./loading.jl:2206 include at ./client.jl:494 unknown function (ip: 0x7c68405ff125) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:635 eval_body at /source/src/interpreter.c:544 eval_body at /source/src/interpreter.c:544 jl_interpret_toplevel_thunk at /source/src/interpreter.c:775 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] include_string at ./loading.jl:2146 _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 _include at ./loading.jl:2206 include at ./client.jl:494 unknown function (ip: 0x7c68405ff125) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] do_call at /source/src/interpreter.c:126 eval_value at /source/src/interpreter.c:223 eval_stmt_value at /source/src/interpreter.c:174 [inlined] eval_body at /source/src/interpreter.c:635 jl_interpret_toplevel_thunk at /source/src/interpreter.c:775 jl_toplevel_eval_flex at /source/src/toplevel.c:934 jl_toplevel_eval_flex at /source/src/toplevel.c:877 ijl_toplevel_eval_in at /source/src/toplevel.c:985 eval at ./boot.jl:385 [inlined] exec_options at ./client.jl:296 _start at ./client.jl:557 jfptr__start_82985.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:2876 [inlined] ijl_apply_generic at /source/src/gf.c:3077 jl_apply at /source/src/julia.h:1982 [inlined] true_main at /source/src/jlapi.c:582 jl_repl_entrypoint at /source/src/jlapi.c:731 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7c684148d249) __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) Allocations: 526464786 (Pool: 526067794; Big: 396992); GC: 405 Testing failed after 1300.32s ERROR: LoadError: Package BaytesDiff errored during testing (received signal: 6) Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Types.jl:70 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:2034 [3] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/Operations.jl:1915 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::Base.PipeEndpoint}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:444 [5] test(pkgs::Vector{Pkg.Types.PackageSpec}; io::Base.PipeEndpoint, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:159 [6] test @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:147 [inlined] [7] #test#74 @ /opt/julia/share/julia/stdlib/v1.10/Pkg/src/API.jl:146 [inlined] [8] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval crashed after 2103.54s: the process was aborted