Package evaluation of AutoEncoderToolkit on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T14:52:07.958


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.08s


################################################################################
# Installation
#

Installing AutoEncoderToolkit...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [1575904b] + AutoEncoderToolkit v0.1.2
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [47edcb42] + ADTypes v1.13.0
  [621f4979] + AbstractFFTs v1.5.0
  [1520ce14] + AbstractTrees v0.4.5
  [7d9f7c33] + Accessors v0.1.41
  [79e6a3ab] + Adapt v4.2.0
  [66dad0bd] + AliasTables v1.1.3
  [dce04be8] + ArgCheck v2.4.0
  [4fba245c] + ArrayInterface v7.18.0
  [a9b6321e] + Atomix v1.1.0
  [1575904b] + AutoEncoderToolkit v0.1.2
  [198e06fe] + BangBang v0.4.3
  [9718e550] + Baselet v0.1.1
  [e2ed5e7c] + Bijections v0.1.9
  [fa961155] + CEnum v0.5.0
  [082447d4] + ChainRules v1.72.2
  [d360d2e6] + ChainRulesCore v1.25.1
  [aaaa29a8] + Clustering v0.15.8
  [861a8166] + Combinatorics v1.0.2
  [38540f10] + CommonSolve v0.2.4
  [bbf7d656] + CommonSubexpressions v0.3.1
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [b152e2b5] + CompositeTypes v0.1.4
  [a33af91c] + CompositionsBase v0.1.2
  [2569d6c7] + ConcreteStructs v0.2.3
  [187b0558] + ConstructionBase v1.5.8
  [6add18c4] + ContextVariablesX v0.1.3
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.20
  [e2d170a0] + DataValueInterfaces v1.0.0
  [244e2a9f] + DefineSingletons v0.1.2
  [8bb1440f] + DelimitedFiles v1.9.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [b4f34e82] + Distances v0.10.12
  [31c24e10] + Distributions v0.25.117
  [ffbed154] + DocStringExtensions v0.9.3
  [5b8099bc] + DomainSets v0.7.15
  [7c1d4256] + DynamicPolynomials v0.6.1
  [da5c29d0] + EllipsisNotation v1.8.0
  [4e289a0a] + EnumX v1.0.4
  [e2ba6199] + ExprTools v0.1.10
  [55351af7] + ExproniconLite v0.10.14
  [cc61a311] + FLoops v0.2.2
  [b9860ae5] + FLoopsBase v0.1.1
  [1a297f60] + FillArrays v1.13.0
⌅ [587475ba] + Flux v0.14.25
  [1fa38f19] + Format v1.3.7
  [f6369f11] + ForwardDiff v0.10.38
  [069b7b12] + FunctionWrappers v1.1.3
  [77dc65aa] + FunctionWrappersWrappers v0.1.3
⌅ [d9f16b24] + Functors v0.4.12
  [0c68f7d7] + GPUArrays v11.2.2
  [46192b85] + GPUArraysCore v0.2.0
  [076d061b] + HashArrayMappedTries v0.2.0
  [34004b35] + HypergeometricFunctions v0.3.27
  [7869d1d1] + IRTools v0.4.14
  [615f187c] + IfElse v0.1.1
  [22cec73e] + InitialValues v0.3.1
  [18e54dd8] + IntegerMathUtils v0.1.2
  [8197267c] + IntervalSets v0.7.10
  [3587e190] + InverseFunctions v0.1.17
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [ae98c720] + Jieko v0.2.1
  [b14d175d] + JuliaVariables v0.2.4
  [63c18a36] + KernelAbstractions v0.9.34
  [929cbde3] + LLVM v9.2.0
  [b964fa9f] + LaTeXStrings v1.4.0
  [23fbe1c1] + Latexify v0.16.6
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [c2834f40] + MLCore v1.0.0
⌃ [7e8f7934] + MLDataDevices v1.5.3
  [d8e11817] + MLStyle v0.4.17
  [f1d291b0] + MLUtils v0.4.7
  [1914dd2f] + MacroTools v0.5.15
  [128add7d] + MicroCollections v0.2.0
  [e1d29d7a] + Missings v1.2.0
  [2e0e35c7] + Moshi v0.3.5
  [102ac46a] + MultivariatePolynomials v0.5.7
  [d8a4904e] + MutableArithmetics v1.6.4
  [872c559c] + NNlib v0.9.27
  [77ba4419] + NaNMath v1.1.2
  [71a1bf82] + NameResolution v0.1.5
  [b8a86587] + NearestNeighbors v0.4.21
  [6fe1bfb0] + OffsetArrays v1.15.0
  [0b1bfda6] + OneHotArrays v0.2.6
⌅ [3bd65402] + Optimisers v0.3.4
  [bac558e1] + OrderedCollections v1.8.0
  [90014a1f] + PDMats v0.11.32
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [8162dcfd] + PrettyPrint v0.2.0
  [27ebfcd6] + Primes v0.5.6
  [33c8b6b6] + ProgressLogging v0.1.4
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [c1ae055f] + RealDot v0.1.0
  [3cdcf5f2] + RecipesBase v1.3.4
  [731186ca] + RecursiveArrayTools v3.30.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.0
  [79098fc4] + Rmath v0.8.0
  [7e49a35a] + RuntimeGeneratedFunctions v0.5.13
  [0bca4576] + SciMLBase v2.75.0
  [c0aeaf25] + SciMLOperators v0.3.12
  [53ae85a6] + SciMLStructures v1.6.1
  [7e506255] + ScopedValues v1.3.0
  [efcf1570] + Setfield v1.1.1
  [605ecd9f] + ShowCases v0.1.0
  [699a6c99] + SimpleTraits v0.9.4
  [a2af1166] + SortingAlgorithms v1.2.1
  [dc90abb0] + SparseInverseSubset v0.1.2
  [276daf66] + SpecialFunctions v2.5.0
  [171d559e] + SplittablesBase v0.1.15
  [aedffcd0] + Static v1.1.1
  [0d7ed370] + StaticArrayInterface v1.8.0
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [4c63d2b9] + StatsFuns v1.3.2
⌃ [09ab397b] + StructArrays v0.6.21
  [2efcf032] + SymbolicIndexingInterface v0.3.38
  [19f23fe9] + SymbolicLimits v0.2.2
  [d1185830] + SymbolicUtils v3.15.0
  [0c5d862f] + Symbolics v6.29.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
⌅ [b36ab563] + TaylorDiff v0.2.5
  [8ea1fca8] + TermInterface v2.0.0
  [a759f4b9] + TimerOutputs v0.5.27
  [28d57a85] + Transducers v0.4.84
  [a7c27f48] + Unityper v0.1.6
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⌅ [e88e6eb3] + Zygote v0.6.75
  [700de1a5] + ZygoteRules v0.2.7
  [dad2f222] + LLVMExtra_jll v0.0.35+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
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  [0dad84c5] + ArgTools v1.1.1
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  [8ba89e20] + Distributed
  [f43a241f] + Downloads v1.6.0
  [7b1f6079] + FileWatching
  [9fa8497b] + Future
  [b77e0a4c] + InteractiveUtils
  [4af54fe1] + LazyArtifacts
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [56ddb016] + Logging
  [d6f4376e] + Markdown
  [a63ad114] + Mmap
  [ca575930] + NetworkOptions v1.2.0
  [44cfe95a] + Pkg v1.10.0
  [de0858da] + Printf
  [3fa0cd96] + REPL
  [9a3f8284] + Random
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  [9e88b42a] + Serialization
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  [2f01184e] + SparseArrays v1.10.0
  [10745b16] + Statistics v1.10.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] + LibCURL_jll v8.4.0+0
  [e37daf67] + LibGit2_jll v1.6.4+0
  [29816b5a] + LibSSH2_jll v1.11.0+1
  [c8ffd9c3] + MbedTLS_jll v2.28.2+1
  [14a3606d] + MozillaCACerts_jll v2023.1.10
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [05823500] + OpenLibm_jll v0.8.1+4
  [bea87d4a] + SuiteSparse_jll v7.2.1+1
  [83775a58] + Zlib_jll v1.2.13+1
  [8e850b90] + libblastrampoline_jll v5.11.0+0
  [8e850ede] + nghttp2_jll v1.52.0+1
  [3f19e933] + p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 12.04s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 526.52s


################################################################################
# Testing
#

     Testing AutoEncoderToolkit
      Status `/tmp/jl_Lgl8o1/Project.toml`
  [1575904b] AutoEncoderToolkit v0.1.2
  [d360d2e6] ChainRulesCore v1.25.1
  [aaaa29a8] Clustering v0.15.8
  [2569d6c7] ConcreteStructs v0.2.3
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.117
  [da5c29d0] EllipsisNotation v1.8.0
⌅ [587475ba] Flux v0.14.25
  [f6369f11] ForwardDiff v0.10.38
  [b8a86587] NearestNeighbors v0.4.21
  [2913bbd2] StatsBase v0.34.4
⌅ [b36ab563] TaylorDiff v0.2.5
⌅ [e88e6eb3] Zygote v0.6.75
  [37e2e46d] LinearAlgebra
  [44cfe95a] Pkg v1.10.0
  [9a3f8284] Random
  [8dfed614] Test
      Status `/tmp/jl_Lgl8o1/Manifest.toml`
  [47edcb42] ADTypes v1.13.0
  [621f4979] AbstractFFTs v1.5.0
  [1520ce14] AbstractTrees v0.4.5
  [7d9f7c33] Accessors v0.1.41
  [79e6a3ab] Adapt v4.2.0
  [66dad0bd] AliasTables v1.1.3
  [dce04be8] ArgCheck v2.4.0
  [4fba245c] ArrayInterface v7.18.0
  [a9b6321e] Atomix v1.1.0
  [1575904b] AutoEncoderToolkit v0.1.2
  [198e06fe] BangBang v0.4.3
  [9718e550] Baselet v0.1.1
  [e2ed5e7c] Bijections v0.1.9
  [fa961155] CEnum v0.5.0
  [082447d4] ChainRules v1.72.2
  [d360d2e6] ChainRulesCore v1.25.1
  [aaaa29a8] Clustering v0.15.8
  [861a8166] Combinatorics v1.0.2
  [38540f10] CommonSolve v0.2.4
  [bbf7d656] CommonSubexpressions v0.3.1
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [b152e2b5] CompositeTypes v0.1.4
  [a33af91c] CompositionsBase v0.1.2
  [2569d6c7] ConcreteStructs v0.2.3
  [187b0558] ConstructionBase v1.5.8
  [6add18c4] ContextVariablesX v0.1.3
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.20
  [e2d170a0] DataValueInterfaces v1.0.0
  [244e2a9f] DefineSingletons v0.1.2
  [8bb1440f] DelimitedFiles v1.9.1
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.12
  [31c24e10] Distributions v0.25.117
  [ffbed154] DocStringExtensions v0.9.3
  [5b8099bc] DomainSets v0.7.15
  [7c1d4256] DynamicPolynomials v0.6.1
  [da5c29d0] EllipsisNotation v1.8.0
  [4e289a0a] EnumX v1.0.4
  [e2ba6199] ExprTools v0.1.10
  [55351af7] ExproniconLite v0.10.14
  [cc61a311] FLoops v0.2.2
  [b9860ae5] FLoopsBase v0.1.1
  [1a297f60] FillArrays v1.13.0
⌅ [587475ba] Flux v0.14.25
  [1fa38f19] Format v1.3.7
  [f6369f11] ForwardDiff v0.10.38
  [069b7b12] FunctionWrappers v1.1.3
  [77dc65aa] FunctionWrappersWrappers v0.1.3
⌅ [d9f16b24] Functors v0.4.12
  [0c68f7d7] GPUArrays v11.2.2
  [46192b85] GPUArraysCore v0.2.0
  [076d061b] HashArrayMappedTries v0.2.0
  [34004b35] HypergeometricFunctions v0.3.27
  [7869d1d1] IRTools v0.4.14
  [615f187c] IfElse v0.1.1
  [22cec73e] InitialValues v0.3.1
  [18e54dd8] IntegerMathUtils v0.1.2
  [8197267c] IntervalSets v0.7.10
  [3587e190] InverseFunctions v0.1.17
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [ae98c720] Jieko v0.2.1
  [b14d175d] JuliaVariables v0.2.4
  [63c18a36] KernelAbstractions v0.9.34
  [929cbde3] LLVM v9.2.0
  [b964fa9f] LaTeXStrings v1.4.0
  [23fbe1c1] Latexify v0.16.6
  [2ab3a3ac] LogExpFunctions v0.3.29
  [c2834f40] MLCore v1.0.0
⌃ [7e8f7934] MLDataDevices v1.5.3
  [d8e11817] MLStyle v0.4.17
  [f1d291b0] MLUtils v0.4.7
  [1914dd2f] MacroTools v0.5.15
  [128add7d] MicroCollections v0.2.0
  [e1d29d7a] Missings v1.2.0
  [2e0e35c7] Moshi v0.3.5
  [102ac46a] MultivariatePolynomials v0.5.7
  [d8a4904e] MutableArithmetics v1.6.4
  [872c559c] NNlib v0.9.27
  [77ba4419] NaNMath v1.1.2
  [71a1bf82] NameResolution v0.1.5
  [b8a86587] NearestNeighbors v0.4.21
  [6fe1bfb0] OffsetArrays v1.15.0
  [0b1bfda6] OneHotArrays v0.2.6
⌅ [3bd65402] Optimisers v0.3.4
  [bac558e1] OrderedCollections v1.8.0
  [90014a1f] PDMats v0.11.32
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [8162dcfd] PrettyPrint v0.2.0
  [27ebfcd6] Primes v0.5.6
  [33c8b6b6] ProgressLogging v0.1.4
  [43287f4e] PtrArrays v1.3.0
  [1fd47b50] QuadGK v2.11.2
  [c1ae055f] RealDot v0.1.0
  [3cdcf5f2] RecipesBase v1.3.4
  [731186ca] RecursiveArrayTools v3.30.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.0
  [79098fc4] Rmath v0.8.0
  [7e49a35a] RuntimeGeneratedFunctions v0.5.13
  [0bca4576] SciMLBase v2.75.0
  [c0aeaf25] SciMLOperators v0.3.12
  [53ae85a6] SciMLStructures v1.6.1
  [7e506255] ScopedValues v1.3.0
  [efcf1570] Setfield v1.1.1
  [605ecd9f] ShowCases v0.1.0
  [699a6c99] SimpleTraits v0.9.4
  [a2af1166] SortingAlgorithms v1.2.1
  [dc90abb0] SparseInverseSubset v0.1.2
  [276daf66] SpecialFunctions v2.5.0
  [171d559e] SplittablesBase v0.1.15
  [aedffcd0] Static v1.1.1
  [0d7ed370] StaticArrayInterface v1.8.0
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [4c63d2b9] StatsFuns v1.3.2
⌃ [09ab397b] StructArrays v0.6.21
  [2efcf032] SymbolicIndexingInterface v0.3.38
  [19f23fe9] SymbolicLimits v0.2.2
  [d1185830] SymbolicUtils v3.15.0
  [0c5d862f] Symbolics v6.29.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
⌅ [b36ab563] TaylorDiff v0.2.5
  [8ea1fca8] TermInterface v2.0.0
  [a759f4b9] TimerOutputs v0.5.27
  [28d57a85] Transducers v0.4.84
  [a7c27f48] Unityper v0.1.6
  [013be700] UnsafeAtomics v0.3.0
  [897b6980] WeakValueDicts v0.1.0
⌅ [e88e6eb3] Zygote v0.6.75
  [700de1a5] ZygoteRules v0.2.7
  [dad2f222] LLVMExtra_jll v0.0.35+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [f50d1b31] Rmath_jll v0.5.1+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
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  [8ba89e20] Distributed
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [9fa8497b] Future
  [b77e0a4c] InteractiveUtils
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  [de0858da] Printf
  [3fa0cd96] REPL
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  [ea8e919c] SHA v0.7.0
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  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [e37daf67] LibGit2_jll v1.6.4+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [05823500] OpenLibm_jll v0.8.1+4
  [bea87d4a] SuiteSparse_jll v7.2.1+1
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
  [3f19e933] p7zip_jll v17.4.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Testing AutoEncoderToolkit.jl

CUDA is not available - skipping CUDA tests.


Testing utils module:


All tests passed!


Testin Encoders...


All tests passed!


Testing decoders...

We changed the last layer number of µ_neurons to match the input dimension
We changed the last layer number of logσ_neurons to match the input dimension
We changed the last layer number of µ_neurons to match the input dimension
We changed the last layer number of σ_neurons to match the input dimension
We changed the last layer number of µ_neurons to match the input dimension
We changed the last layer number of logσ_neurons to match the input dimension
We changed the last layer number of µ_neurons to match the input dimension
We changed the last layer number of σ_neurons to match the input dimension

All tests passed!


Testing AEs module...


All tests passed!


Testing VAEs module...

Generating synthetic data...
Defining layers structure...
Defining encoders...
Defining decoders...

All tests passed!


Testing MMDVAEs.jl module...


All tests passed!


Testing InfoMaxVAEs.jl...


All tests passed!


Testing HVAEs module:

Generating synthetic data...
WARNING: Method definition f(Any, Any) in module Main at /home/pkgeval/.julia/packages/AutoEncoderToolkit/YfAJl/test/vae.jl:68 overwritten at /home/pkgeval/.julia/packages/AutoEncoderToolkit/YfAJl/test/hvae.jl:42.
Defining layers structure...
Defining encoders...
Defining decoders...

All tests passed!


Testing RHVAEs module:

Generating synthetic data...
WARNING: Method definition f(Any, Any) in module Main at /home/pkgeval/.julia/packages/AutoEncoderToolkit/YfAJl/test/hvae.jl:42 overwritten at /home/pkgeval/.julia/packages/AutoEncoderToolkit/YfAJl/test/rhvae.jl:48.
Defining layers structure...
Defining encoders...
Defining decoders...

All tests passed!


Testing AutoEncoderToolkit.diffgeo.NeuralGeodesics module...

Defining RHVAE layers structure...

All tests passed!

Test Summary:         | Pass  Total      Time
AutoEncoderToolkit.jl | 1387   1387  24m50.5s
     Testing AutoEncoderToolkit tests passed 

Testing completed after 1510.9s

PkgEval succeeded after 2076.41s