Package evaluation of AtomicSymmetries on Julia 1.10.8 (92f03a4775*) started at 2025-02-25T05:57:36.896


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 5.35s


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# Installation
#

Installing AtomicSymmetries...
   Resolving package versions...
    Updating `~/.julia/environments/v1.10/Project.toml`
  [7e24f7a5] + AtomicSymmetries v0.6.0
    Updating `~/.julia/environments/v1.10/Manifest.toml`
  [7e24f7a5] + AtomicSymmetries v0.6.0
  [8ce10254] + Bumper v0.7.1
  [34da2185] + Compat v4.16.0
⌅ [80545937] + CrystallographyCore v0.3.3
  [692b3bcd] + JLLWrappers v1.7.0
  [aea7be01] + PrecompileTools v1.2.1
  [21216c6a] + Preferences v1.4.3
  [f761d5c5] + Spglib v0.9.4
  [90137ffa] + StaticArrays v1.9.12
  [1e83bf80] + StaticArraysCore v1.4.3
  [6ec83bb0] + StructEquality v2.1.0
  [c4a57d5a] + UnsafeArrays v1.0.6
⌅ [ac4a9f1e] + spglib_jll v2.1.0+0
  [56f22d72] + Artifacts
  [ade2ca70] + Dates
  [8f399da3] + Libdl
  [37e2e46d] + LinearAlgebra
  [de0858da] + Printf
  [9a3f8284] + Random
  [ea8e919c] + SHA v0.7.0
  [fa267f1f] + TOML v1.0.3
  [cf7118a7] + UUIDs
  [4ec0a83e] + Unicode
  [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0
  [4536629a] + OpenBLAS_jll v0.3.23+4
  [8e850b90] + libblastrampoline_jll v5.11.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 8.18s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 90.75s


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# Testing
#

     Testing AtomicSymmetries
      Status `/tmp/jl_qId4L3/Project.toml`
  [7e24f7a5] AtomicSymmetries v0.6.0
  [8ce10254] Bumper v0.7.1
  [8bb1440f] DelimitedFiles v1.9.1
  [438e738f] PyCall v1.96.4
  [f761d5c5] Spglib v0.9.4
  [37e2e46d] LinearAlgebra
  [8dfed614] Test
      Status `/tmp/jl_qId4L3/Manifest.toml`
  [7e24f7a5] AtomicSymmetries v0.6.0
  [8ce10254] Bumper v0.7.1
  [34da2185] Compat v4.16.0
  [8f4d0f93] Conda v1.10.2
⌅ [80545937] CrystallographyCore v0.3.3
  [8bb1440f] DelimitedFiles v1.9.1
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [1914dd2f] MacroTools v0.5.15
  [69de0a69] Parsers v2.8.1
  [aea7be01] PrecompileTools v1.2.1
  [21216c6a] Preferences v1.4.3
  [438e738f] PyCall v1.96.4
  [f761d5c5] Spglib v0.9.4
  [90137ffa] StaticArrays v1.9.12
  [1e83bf80] StaticArraysCore v1.4.3
  [6ec83bb0] StructEquality v2.1.0
  [c4a57d5a] UnsafeArrays v1.0.6
  [81def892] VersionParsing v1.3.0
⌅ [ac4a9f1e] spglib_jll v2.1.0+0
  [0dad84c5] ArgTools v1.1.1
  [56f22d72] Artifacts
  [2a0f44e3] Base64
  [ade2ca70] Dates
  [f43a241f] Downloads v1.6.0
  [7b1f6079] FileWatching
  [b77e0a4c] InteractiveUtils
  [b27032c2] LibCURL v0.6.4
  [8f399da3] Libdl
  [37e2e46d] LinearAlgebra
  [56ddb016] Logging
  [d6f4376e] Markdown
  [a63ad114] Mmap
  [ca575930] NetworkOptions v1.2.0
  [de0858da] Printf
  [9a3f8284] Random
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test
  [cf7118a7] UUIDs
  [4ec0a83e] Unicode
  [e66e0078] CompilerSupportLibraries_jll v1.1.1+0
  [deac9b47] LibCURL_jll v8.4.0+0
  [29816b5a] LibSSH2_jll v1.11.0+1
  [c8ffd9c3] MbedTLS_jll v2.28.2+1
  [14a3606d] MozillaCACerts_jll v2023.1.10
  [4536629a] OpenBLAS_jll v0.3.23+4
  [83775a58] Zlib_jll v1.2.13+1
  [8e850b90] libblastrampoline_jll v5.11.0+0
  [8e850ede] nghttp2_jll v1.52.0+1
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
vector_input = [0.610578304362248, 0.23936203253481791, 0.9416044860193711, 0.6522406358875276, 0.04602097725959642, 0.7365423976170717]
vector_input = [0.0, 0.0, 0.0, 0.0, 0.0, 0.0]
Test Summary: | Pass  Total   Time
BCC           |    3      3  50.4s
vector_input = [0.610578304362248, 0.23936203253481791, 0.9416044860193711, 0.6522406358875276, 0.04602097725959642, 0.7365423976170717]
vector_input = [0.05945680202537355, 0.05945680202537355, 0.05945680202537354, -0.05945680202537354, -0.05945680202537355, -0.05945680202537355]
Found 1 generators: [1]
Found 4 generators: [1, 2, 4, 5]
Test Summary: | Pass  Total     Time
R3M           |    3      3  2m04.9s
WARNING: Method definition get_pm3m_perovskite() in module Main at /home/pkgeval/.julia/packages/AtomicSymmetries/cjitg/test/define_cell.jl:1 overwritten on the same line (check for duplicate calls to `include`).
WARNING: Method definition get_gold_unit_cell() in module Main at /home/pkgeval/.julia/packages/AtomicSymmetries/cjitg/test/define_cell.jl:15 overwritten on the same line (check for duplicate calls to `include`).
WARNING: Method definition get_pm3m_supercell() in module Main at /home/pkgeval/.julia/packages/AtomicSymmetries/cjitg/test/define_cell.jl:26 overwritten on the same line (check for duplicate calls to `include`).
WARNING: Method definition kwcall(NamedTuple{names, T} where T<:Tuple where names, typeof(Main.get_pm3m_supercell)) in module Main at /home/pkgeval/.julia/packages/AtomicSymmetries/cjitg/test/define_cell.jl:26 overwritten on the same line (check for duplicate calls to `include`).
WARNING: Method definition get_supercell(Any, Any, Any, Any) in module Main at /home/pkgeval/.julia/packages/AtomicSymmetries/cjitg/test/define_cell.jl:31 overwritten on the same line (check for duplicate calls to `include`).
positions' = [0.0 0.0 0.0; 0.25 0.25 0.25; 0.25 0.25 0.0; 0.0 0.25 0.25; 0.25 0.0 0.25; 0.0 0.0 0.5; 0.25 0.25 0.75; 0.25 0.25 0.5; 0.0 0.25 0.75; 0.25 0.0 0.75; 0.0 0.5 0.0; 0.25 0.75 0.25; 0.25 0.75 0.0; 0.0 0.75 0.25; 0.25 0.5 0.25; 0.0 0.5 0.5; 0.25 0.75 0.75; 0.25 0.75 0.5; 0.0 0.75 0.75; 0.25 0.5 0.75; 0.5 0.0 0.0; 0.75 0.25 0.25; 0.75 0.25 0.0; 0.5 0.25 0.25; 0.75 0.0 0.25; 0.5 0.0 0.5; 0.75 0.25 0.75; 0.75 0.25 0.5; 0.5 0.25 0.75; 0.75 0.0 0.75; 0.5 0.5 0.0; 0.75 0.75 0.25; 0.75 0.75 0.0; 0.5 0.75 0.25; 0.75 0.5 0.25; 0.5 0.5 0.5; 0.75 0.75 0.75; 0.75 0.75 0.5; 0.5 0.75 0.75; 0.75 0.5 0.75]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 1: [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 2: [21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 3: [11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 4: [31, 32, 33, 34, 35, 36, 37, 38, 39, 40, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 5: [6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 16, 17, 18, 19, 20, 11, 12, 13, 14, 15, 26, 27, 28, 29, 30, 21, 22, 23, 24, 25, 36, 37, 38, 39, 40, 31, 32, 33, 34, 35]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 6: [26, 27, 28, 29, 30, 21, 22, 23, 24, 25, 36, 37, 38, 39, 40, 31, 32, 33, 34, 35, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 16, 17, 18, 19, 20, 11, 12, 13, 14, 15]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 7: [16, 17, 18, 19, 20, 11, 12, 13, 14, 15, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5, 36, 37, 38, 39, 40, 31, 32, 33, 34, 35, 26, 27, 28, 29, 30, 21, 22, 23, 24, 25]
Symmetry: 
pm3m_group_supercell.symmetries[index] = [1.0 0.0 0.0; 0.0 1.0 0.0; 0.0 0.0 1.0]
IRT of the translation 8: [36, 37, 38, 39, 40, 31, 32, 33, 34, 35, 26, 27, 28, 29, 30, 21, 22, 23, 24, 25, 16, 17, 18, 19, 20, 11, 12, 13, 14, 15, 6, 7, 8, 9, 10, 1, 2, 3, 4, 5]
Positions: [0.0 0.0 0.0; -2.7502851037107878e-17 -5.525842665273679e-17 0.5000000000000001; 3.836886636674725e-17 0.49999999999999994 6.102776270852971e-17; -1.2908750463961291e-16 0.5 0.5000000000000001; 0.5 1.1788932642226054e-17 2.9745261419577613e-17; 0.5 3.744594905416056e-17 0.5; 0.5 0.4999999999999998 1.7051282530167088e-16; 0.4999999999999997 0.5 0.5000000000000002]
Cell: [5.7800372359271295 0.0 0.0; 2.890018617963564 5.005659081132882 0.0; 2.890018617963565 1.668553027044295 4.719842776455855]
Types: [0, 0, 0, 0, 0, 0, 0, 0]
Gold group: 96
┌ Warning: The python spglib module is not installed. Skipping the test.
└ @ Main ~/.julia/packages/AtomicSymmetries/cjitg/test/runtests.jl:26
Test Summary: | Pass  Total   Time
Spglib tests  |    5      5  15.5s
Test Summary: | Pass  Total  Time
Filter        |   22     22  3.1s
cryst_coords' = [0.0 0.5 0.0; 0.8 0.2 -0.8]
cart_coords' = [0.1 0.5 0.1; 0.44000000000000006 0.2 -0.6]
new_cryst_coords' = [-8.326672684688674e-17 0.49999999999999994 5.551115123125783e-17; 0.7999999999999997 0.1999999999999999 -0.7999999999999997]
Test Summary:   | Pass  Total  Time
Cart to Crystal |    6      6  0.5s
Test Summary:                                       | Pass  Total   Time
ASR and Vector symmetrization (non-orthogonal cell) |    1      1  16.4s
Test Summary:           |   Pass   Total   Time
exact fc symmetrization | 147564  147564  36.4s
Test Summary:                | Pass  Total   Time
translations and irt and ASR |   52     52  10.0s
Found 13 generators: [1, 4, 7, 8, 10, 13, 16, 43, 148, 154, 155, 160, 190]
Test Summary:                       | Pass  Total   Time
generators of a non-orthogonal cell | 2304   2304  13.4s
     Testing AtomicSymmetries tests passed 

Testing completed after 296.22s

PkgEval succeeded after 405.75s