Package evaluation of TreeOfLife on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-28T23:11:33.010


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# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 7.79s


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# Installation
#

Installing TreeOfLife...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [84ef9827] + TreeOfLife v0.0.10
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [bac558e1] + OrderedCollections v1.8.0
  [d96e819e] + Parameters v0.12.3
  [84ef9827] + TreeOfLife v0.0.10
  [3a884ed6] + UnPack v1.0.2

Installation completed after 0.97s


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# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...

Precompilation completed after 16.83s


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# Testing
#

     Testing TreeOfLife
      Status `/tmp/jl_MmgGRZ/Project.toml`
⌅ [4c88cf16] Aqua v0.6.7
  [d96e819e] Parameters v0.12.3
  [84ef9827] TreeOfLife v0.0.10
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_MmgGRZ/Manifest.toml`
⌅ [4c88cf16] Aqua v0.6.7
  [34da2185] Compat v4.16.0
  [bac558e1] OrderedCollections v1.8.0
  [d96e819e] Parameters v0.12.3
  [84ef9827] TreeOfLife v0.0.10
  [3a884ed6] UnPack v1.0.2
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [deac9b47] LibCURL_jll v8.12.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2024.12.31
  [458c3c95] OpenSSL_jll v3.0.16+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850ede] nghttp2_jll v1.65.0+0
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Skipping Base.active_repl
Skipping Base.MainInclude.Distributed
Skipping Base.MainInclude.InteractiveUtils
Test Summary:    | Pass  Total  Time
Method ambiguity |    1      1  8.4s
Test Summary:           | Pass  Total  Time
Unbound type parameters |    1      1  0.1s
┌ Warning: `isbindingresolved(m::Module, var::Symbol)` is deprecated, use `true` instead.
│   caller = walkmodules(f::Aqua.var"#undefined_exports##0#undefined_exports##1"{Vector{Symbol}}, x::Module) at exports.jl:5
└ @ Core ~/.julia/packages/Aqua/zpdNP/src/exports.jl:5
Test Summary:     | Pass  Total   Time
Undefined exports |    1      1  25.3s
Test Summary:                              | Pass  Total  Time
Compare Project.toml and test/Project.toml |    1      1  0.1s
Test Summary:      | Pass  Total  Time
Stale dependencies |    1      1  4.1s
Test Summary: | Pass  Total  Time
Compat bounds |    1      1  2.1s
Test Summary:           | Pass  Total  Time
Project.toml formatting |    2      2  1.3s
┌ Warning: `isbindingresolved(m::Module, var::Symbol)` is deprecated, use `true` instead.
│   caller = walkmodules(f::Aqua.Piracy.var"#3#4"{Bool, IdSet{Any}, Vector{Method}}, x::Module) at exports.jl:5
└ @ Core ~/.julia/packages/Aqua/zpdNP/src/exports.jl:5
Test Summary: | Pass  Total   Time
Piracy        |    1      1  24.7s
Test Summary: | Pass  Total  Time
types         |   36     36  5.3s
Test Summary:   | Pass  Total  Time
ignore_comments |    6      6  0.0s
Test Summary: | Pass  Total  Time
from_newick   |    4      4  1.5s
Test Summary: | Pass  Total  Time
fromnewick    |   13     13  2.8s
Test Summary: | Pass  Total  Time
tonewick      |    3      3  0.4s
Test Summary:     | Pass  Total  Time
read/write newick |    2      2  0.3s
Test Summary: | Pass  Total  Time
gettips       |    1      1  0.2s
Test Summary: | Pass  Total  Time
getparent     |    1      1  0.4s
Test Summary: | Pass  Total  Time
getchildren   |    1      1  0.7s
Test Summary: | Pass  Total  Time
getsubtree    |    7      7  1.7s
Test Summary: | Pass  Total  Time
getmrca       |    6      6  1.1s
Test Summary: | Pass  Total  Time
getdescnames  |    2      2  1.1s
Test Summary: | Pass  Total  Time
ismonophyl    |    4      4  0.1s
Test Summary: | Pass  Total  Time
cutfromroot   |    9      9  0.7s
     Testing TreeOfLife tests passed 

Testing completed after 104.33s

PkgEval succeeded after 139.99s