Package evaluation of QuantumESPRESSOExpress on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T08:03:23.433 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing QuantumESPRESSOExpress... Resolving package versions... Installed Conda ─────────────────── v1.10.2 Installed QuantumESPRESSOCommands ─ v0.6.4 Installed PyCall ────────────────── v1.96.4 Updating `~/.julia/environments/v1.13/Project.toml` [524a00d3] + QuantumESPRESSOExpress v0.5.9 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 ⌅ [df5135bc] + AbInitioSoftwareBase v0.6.5 [6b84a0a3] + AcuteML v0.11.3 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [861a8166] + Combinatorics v1.0.2 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [863f3e99] + Comonicon v1.0.8 [34da2185] + Compat v4.16.0 [8f4d0f93] + Conda v1.10.2 [5218b696] + Configurations v0.17.6 [187b0558] + ConstructionBase v1.5.8 [150eb455] + CoordinateTransformations v0.6.4 [5a653867] + Counters v0.3.4 [a8cc5b0e] + Crayons v4.1.1 ⌅ [3bff3928] + Crystallography v0.5.1 ⌅ [93b1d1cd] + CrystallographyBase v0.5.2 [9a962f9c] + DataAPI v1.16.0 ⌃ [a93c6f00] + DataFrames v1.3.6 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.52 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [0438fec6] + EquationsOfState v4.0.0 [1eaa2786] + EquationsOfStateOfSolids v0.4.2 [b12df14e] + Express v0.9.2 [55351af7] + ExproniconLite v0.10.14 [8f5d6c58] + EzXML v1.2.1 [5789e2e9] + FileIO v1.17.0 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.38 ⌅ [d9f16b24] + Functors v0.2.8 [c27321d9] + Glob v1.3.1 [86223c79] + Graphs v1.12.1 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.4 [ceb4388c] + IsURL v0.2.0 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 ⌅ [033835bb] + JLD2 v0.4.54 [692b3bcd] + JLLWrappers v1.7.0 [682c06a0] + JSON v0.21.4 [2ab3a3ac] + LogExpFunctions v0.3.29 ⌅ [2fda8390] + LsqFit v0.12.1 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.9.1 [77ba4419] + NaNMath v1.1.3 [87e2bd06] + OptimBase v2.0.2 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.34 [9b87118b] + PackageCompiler v2.2.0 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.3 [7b2266bf] + PeriodicTable v1.2.1 [3a141323] + PolynomialRoots v1.0.0 ⌅ [f27b6e38] + Polynomials v3.2.13 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 ⌅ [08abe8d2] + PrettyTables v1.3.1 [1b2dc2e6] + Pseudopotentials v0.8.1 [43287f4e] + PtrArrays v1.3.0 [438e738f] + PyCall v1.96.4 [e44308e6] + PyFortran90Namelists v0.1.0 [5a1273f0] + PyQHA v0.1.1 [1fd47b50] + QuadGK v2.11.2 ⌅ [95228164] + QuantumESPRESSO v0.8.1 ⌅ [51b62caa] + QuantumESPRESSOBase v0.7.8 ⌅ [f713baf6] + QuantumESPRESSOCommands v0.6.4 [524a00d3] + QuantumESPRESSOExpress v0.5.9 ⌅ [a4e7ca57] + QuantumESPRESSOFormatter v0.3.9 ⌅ [a780ab42] + QuantumESPRESSOParser v0.3.12 [cbbcb084] + ReadableRegex v0.3.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 ⌅ [f2b01f46] + Roots v1.2.0 [6c6a2e73] + Scratch v1.2.1 [efcf1570] + Setfield v1.1.2 [699a6c99] + SimpleTraits v0.9.4 ⌅ [6a97d125] + SimpleWorkflows v0.16.2 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 ⌅ [f761d5c5] + Spglib v0.5.3 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.5.0 [69024149] + StringEncodings v0.3.7 ⌅ [4093c41a] + StructHelpers v0.1.5 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [3bb67fe8] + TranscodingStreams v0.11.3 [410a4b4d] + Tricks v0.1.10 [0ca489f0] + TryCatch v0.1.1 [0fb2cfb0] + TypeTransform v0.1.3 [3a884ed6] + UnPack v1.0.2 [8030dd95] + UnifiedPseudopotentialFormat v0.4.1 [1986cc42] + Unitful v1.22.0 [a7773ee8] + UnitfulAtomic v1.0.0 [81def892] + VersionParsing v1.3.0 [ddb6d928] + YAML v0.4.13 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 ⌅ [ac4a9f1e] + spglib_jll v1.16.5+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Building QuantumESPRESSOCommands → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/912cf2dc86d82cdf8c7f4524644969065118a407/build.log` Building Conda ──────────────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/b19db3927f0db4151cb86d073689f2428e524576/build.log` Building PyCall ─────────────────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/9816a3826b0ebf49ab4926e2b18842ad8b5c8f04/build.log` Installation completed after 117.69s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ✗ JLD2 53016.4 ms ✓ DataFrames 9831.8 ms ✓ AcuteML 9179.2 ms ✓ CrystallographyBase 22262.9 ms ✓ QuantumESPRESSOCommands ✗ SimpleWorkflows ✗ UnifiedPseudopotentialFormat 7513.4 ms ✓ Crystallography ✗ Express 19615.3 ms ? QuantumESPRESSOBase 8397.0 ms ? QuantumESPRESSOParser 50794.4 ms ? QuantumESPRESSOFormatter 6553.0 ms ? QuantumESPRESSO 13281.1 ms ? QuantumESPRESSOExpress 5 dependencies successfully precompiled in 506 seconds. 169 already precompiled. 5 dependencies failed but may be precompilable after restarting julia 6 dependencies had output during precompilation: ┌ QuantumESPRESSO │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DataFrames │ WARNING: method definition for #DataFrame#200 at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/dataframe/dataframe.jl:397 declares type variable T but does not use it. │ WARNING: method definition for col_ordering at /home/pkgeval/.julia/packages/DataFrames/JZ7x5/src/abstractdataframe/sort.jl:145 declares type variable O but does not use it. └ ┌ QuantumESPRESSOFormatter │ [ Info: Installing f90nml via the Conda f90nml package... │ [ Info: Running `conda config --add channels conda-forge --file /home/pkgeval/.julia/conda/3/x86_64/condarc-julia.yml --force` in root environment │ /home/pkgeval/.julia/conda/3/x86_64/lib/python3.12/site-packages/conda/base/context.py:198: FutureWarning: Adding 'defaults' to channel list implicitly is deprecated and will be removed in 25.9. │ │ To remove this warning, please choose a default channel explicitly with conda's regular configuration system, e.g. by adding 'defaults' to the list of channels: │ │ conda config --add channels defaults │ │ For more information see https://docs.conda.io/projects/conda/en/stable/user-guide/configuration/use-condarc.html │ │ deprecated.topic( │ [ Info: Running `conda install -q -y f90nml` in root environment │ Channels: │ - conda-forge │ - defaults │ Platform: linux-64 │ Collecting package metadata (repodata.json): ...working... done │ Solving environment: ...working... done │ │ ## Package Plan ## │ │ environment location: /home/pkgeval/.julia/conda/3/x86_64 │ │ added / updated specs: │ - f90nml │ │ │ The following packages will be downloaded: │ │ package | build │ ---------------------------|----------------- │ f90nml-1.4.4 | pyhd8ed1ab_1 33 KB conda-forge │ ------------------------------------------------------------ │ Total: 33 KB │ │ The following NEW packages will be INSTALLED: │ │ f90nml conda-forge/noarch::f90nml-1.4.4-pyhd8ed1ab_1 │ │ │ Preparing transaction: ...working... done │ Verifying transaction: ...working... done │ Executing transaction: ...working... done │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOExpress │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ Precompilation completed after 512.96s ################################################################################ # Loading # Loading QuantumESPRESSOExpress... Precompiling packages... ✗ JLD2 5963.7 ms ? QuantumESPRESSOBase ✗ SimpleWorkflows ✗ UnifiedPseudopotentialFormat 8331.7 ms ? QuantumESPRESSOParser ✗ Express 12051.5 ms ? QuantumESPRESSOFormatter 6775.5 ms ? QuantumESPRESSO Info Given QuantumESPRESSOExpress was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 14430.1 ms ? QuantumESPRESSOExpress 0 dependencies successfully precompiled in 309 seconds. 174 already precompiled. 5 dependencies failed but may be precompilable after restarting julia 5 dependencies had output during precompilation: ┌ QuantumESPRESSO │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOFormatter │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOExpress │ [Output was shown above] └ ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... 22778.1 ms ✓ QuantumESPRESSOCommands 6023.3 ms ? QuantumESPRESSOBase 8413.6 ms ? QuantumESPRESSOParser 12012.1 ms ? QuantumESPRESSOFormatter Info Given QuantumESPRESSO was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 6699.7 ms ? QuantumESPRESSO 1 dependency successfully precompiled in 57 seconds. 102 already precompiled. 4 dependencies failed but may be precompilable after restarting julia 4 dependencies had output during precompilation: ┌ QuantumESPRESSO │ [Output was shown above] └ ┌ QuantumESPRESSOFormatter │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOParser │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ QuantumESPRESSOBase │ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... Info Given QuantumESPRESSOBase was explicitly requested, output will be shown live  WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. 8141.6 ms ? QuantumESPRESSOBase WARNING: Method definition (::Type{QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist})(QuantumESPRESSOBase.Inputs.PWscf.ControlNamelist) in module PWscf at /home/pkgeval/.julia/packages/QuantumESPRESSOBase/nH4ko/src/Inputs/PWscf/namelists.jl:134 overwritten at /home/pkgeval/.julia/packages/StructHelpers/hTI1b/src/StructHelpers.jl:37. ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. Precompiling packages... 6146.6 ms ? QuantumESPRESSOBase Info Given QuantumESPRESSOParser was explicitly requested, output will be shown live  ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-002c-c50f87c4f723 is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2613 1780.1 ms ? QuantumESPRESSOParser ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-002c-c50f87c4f723 is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2613 Precompiling packages... 5958.5 ms ? QuantumESPRESSOBase 1631.8 ms ? QuantumESPRESSOParser Info Given QuantumESPRESSOFormatter was explicitly requested, output will be shown live  ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-002c-c50f87c4f723 is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2613 4740.7 ms ? QuantumESPRESSOFormatter ┌ Warning: Module QuantumESPRESSOBase with build ID ffffffff-ffff-ffff-002c-c50f87c4f723 is missing from the cache. │ This may mean QuantumESPRESSOBase [51b62caa-b28f-11e9-38c2-1f67cb498e05] does not support precompilation but is imported by a module that does. └ @ Base loading.jl:2613 WARNING: Imported binding QuantumESPRESSOBase.QuantumESPRESSOInput was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding QuantumESPRESSOBase.dropdefault was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding QuantumESPRESSOBase.groupname was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding AbInitioSoftwareBase.FormatConfig was undeclared at import time during import to QuantumESPRESSOFormatter. WARNING: Imported binding AbInitioSoftwareBase.Namelist was undeclared at import time during import to QuantumESPRESSOFormatter. ERROR: LoadError: invalid method definition in QuantumESPRESSOFormatter: exported function AbInitioSoftwareBase.FormatConfig does not exist Stacktrace: [1] top-level scope @ ~/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/input.jl:7 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/QuantumESPRESSOFormatter.jl:3 [4] include(mod::Module, _path::String) @ Base ./Base.jl:303 [5] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2690 [6] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [7] macro expansion @ ./loading.jl:2393 [inlined] [8] macro expansion @ ./lock.jl:376 [inlined] [9] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [10] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [11] top-level scope @ ~/.julia/packages/QuantumESPRESSO/Ap3Dh/src/Inputs.jl:72 [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [13] top-level scope @ ~/.julia/packages/QuantumESPRESSO/Ap3Dh/src/QuantumESPRESSO.jl:3 [14] include(mod::Module, _path::String) @ Base ./Base.jl:303 [15] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2690 [16] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [17] macro expansion @ ./loading.jl:2393 [inlined] [18] macro expansion @ ./lock.jl:376 [inlined] [19] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [20] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [21] top-level scope @ ~/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/EquationOfStateWorkflow/EquationOfStateWorkflow.jl:4 [22] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [23] top-level scope @ ~/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/QuantumESPRESSOExpress.jl:15 [24] include(mod::Module, _path::String) @ Base ./Base.jl:303 [25] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2690 [26] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [27] macro expansion @ ./loading.jl:2393 [inlined] [28] macro expansion @ ./lock.jl:376 [inlined] [29] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [30] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [31] eval(m::Module, e::Any) @ Core ./boot.jl:489 [32] exec_options(opts::Base.JLOptions) @ Base ./client.jl:297 [33] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/input.jl:7 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOFormatter/x01CM/src/QuantumESPRESSOFormatter.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSO/Ap3Dh/src/Inputs.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSO/Ap3Dh/src/QuantumESPRESSO.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/EquationOfStateWorkflow/EquationOfStateWorkflow.jl:1 in expression starting at /home/pkgeval/.julia/packages/QuantumESPRESSOExpress/Wl5Ji/src/QuantumESPRESSOExpress.jl:1 Loading failed after 474.03s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using QuantumESPRESSOExpress'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 1136.16s: illegal method overwrites during precompilation