Package evaluation of Normalization on Julia 1.13.0-DEV.443 (8a8e3d1f98*) started at 2025-04-28T23:44:34.353 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.99s ################################################################################ # Installation # Installing Normalization... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [be38d6a3] + Normalization v0.7.3 Updating `~/.julia/environments/v1.13/Manifest.toml` [7d9f7c33] + Accessors v0.1.42 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [3587e190] + InverseFunctions v0.1.17 [1914dd2f] + MacroTools v0.5.16 [be38d6a3] + Normalization v0.7.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [56f22d72] + Artifacts v1.11.0 [ade2ca70] + Dates v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [de0858da] + Printf v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 3.57s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 98.55s ################################################################################ # Testing # Testing Normalization Status `/tmp/jl_NddFHH/Project.toml` [6e4b80f9] BenchmarkTools v1.6.0 [a93c6f00] DataFrames v1.7.0 [0703355e] DimensionalData v0.29.15 [8fd68953] FeatureTransforms v0.4.1 [be38d6a3] Normalization v0.7.3 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.4 [1986cc42] Unitful v1.22.0 [9a3f8284] Random v1.11.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_NddFHH/Manifest.toml` [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 [6e4b80f9] BenchmarkTools v1.6.0 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.5.8 [a8cc5b0e] Crayons v4.1.1 [9a962f9c] DataAPI v1.16.0 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [e2d170a0] DataValueInterfaces v1.0.0 [0703355e] DimensionalData v0.29.15 [ffbed154] DocStringExtensions v0.9.4 [411431e0] Extents v0.1.5 [8fd68953] FeatureTransforms v0.4.1 [842dd82b] InlineStrings v1.4.3 [85a1e053] Interfaces v0.3.2 [8197267c] IntervalSets v0.7.11 [3587e190] InverseFunctions v0.1.17 [41ab1584] InvertedIndices v1.3.1 [92d709cd] IrrationalConstants v0.2.4 [82899510] IteratorInterfaceExtensions v1.0.0 [682c06a0] JSON v0.21.4 [b964fa9f] LaTeXStrings v1.4.0 [2ab3a3ac] LogExpFunctions v0.3.29 [1914dd2f] MacroTools v0.5.16 [e1d29d7a] Missings v1.2.0 [356022a1] NamedDims v1.2.2 [be38d6a3] Normalization v0.7.3 [bac558e1] OrderedCollections v1.8.0 [69de0a69] Parsers v2.8.3 [2dfb63ee] PooledArrays v1.4.3 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [08abe8d2] PrettyTables v2.4.0 [43287f4e] PtrArrays v1.3.0 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [91c51154] SentinelArrays v1.4.8 [a2af1166] SortingAlgorithms v1.2.1 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [892a3eda] StringManipulation v0.4.1 [3783bdb8] TableTraits v1.0.1 [bd369af6] Tables v1.12.0 [1986cc42] Unitful v1.22.0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9abbd945] Profile v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... Precompiling packages... 3861.2 ms ✓ BenchmarkTools 1 dependency successfully precompiled in 4 seconds. 16 already precompiled. Precompiling packages... 87186.3 ms ✓ DataFrames 1 dependency successfully precompiled in 87 seconds. 34 already precompiled. Precompiling packages... 11578.8 ms ✓ Normalization → DataFramesExt 1 dependency successfully precompiled in 12 seconds. 46 already precompiled. Precompiling packages... 2418.6 ms ✓ Unitful → InverseFunctionsUnitfulExt 2615.6 ms ✓ Accessors → UnitfulExt 2 dependencies successfully precompiled in 5 seconds. 18 already precompiled. Precompiling packages... Info Given DimensionalData was explicitly requested, output will be shown live  WARNING: Detected access to binding `Dimensions.X` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `Dimensions.Y` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `DimensionalData.DimArray` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `Dimensions.Z` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. WARNING: Detected access to binding `DimensionalData.DimStack` in a world prior to its definition world.  Julia 1.12 has introduced more strict world age semantics for global bindings.  !!! This code may malfunction under Revise.  !!! This code will error in future versions of Julia. Hint: Add an appropriate `invokelatest` around the access to this binding. 27495.0 ms ✓ DimensionalData 1 dependency successfully precompiled in 28 seconds. 34 already precompiled. 1 dependency had output during precompilation: ┌ DimensionalData │ [Output was shown above] └ Precompiling packages... 2759.3 ms ✓ Accessors → IntervalSetsExt 1 dependency successfully precompiled in 3 seconds. 15 already precompiled. Precompiling packages... 3165.8 ms ✓ Normalization → DimensionalDataExt 1 dependency successfully precompiled in 3 seconds. 45 already precompiled. Precompiling packages... 4025.4 ms ✓ DimensionalData → DimensionalDataStatsBase 1 dependency successfully precompiled in 4 seconds. 52 already precompiled. Test Summary: | Pass Total Time negdims | 3 3 2.8s Test Summary: | Pass Total Time Mapdims | 1 1 9.1s Test Summary: | Pass Total Time Constructor | 4 4 0.4s Test Summary: | Pass Total Time 1D normalization | 21 21 7.6s Test Summary: | Pass Total Time 1D half z-score normalization | 16 16 2.6s Test Summary: | Pass Total Time ZScore | 12 12 4.4s Test Summary: | Pass Total Time RobustZScore | 12 12 7.5s Test Summary: | Pass Total Time Sigmoid | 12 12 2.3s Test Summary: | Pass Total Time RobustSigmoid | 12 12 0.5s Test Summary: | Pass Total Time MinMax | 12 12 3.3s Test Summary: | Pass Total Time Center | 12 12 2.1s Test Summary: | Pass Total Time RobustCenter | 12 12 0.7s Test Summary: | Pass Total Time UnitEnergy | 12 12 2.7s Test Summary: | Pass Total Time HalfZScore | 12 12 1.1s Test Summary: | Pass Total Time RobustHalfZScore | 12 12 0.6s Test Summary: | Pass Total Time OutlierSuppress | 6 6 6.2s Test Summary: | Pass Total Time RobustOutlierSuppress | 6 6 0.4s Test Summary: | Pass Total Time 2D normalization | 10 10 8.9s Test Summary: | Pass Total Time ZScore 2D | 6 6 0.0s Test Summary: | Pass Total Time RobustZScore 2D | 6 6 0.8s Test Summary: | Pass Total Time Sigmoid 2D | 6 6 3.8s Test Summary: | Pass Total Time RobustSigmoid 2D | 6 6 0.3s Test Summary: | Pass Total Time MinMax 2D | 6 6 4.2s Test Summary: | Pass Total Time Center 2D | 6 6 2.4s Test Summary: | Pass Total Time RobustCenter 2D | 6 6 0.3s Test Summary: | Pass Total Time UnitEnergy 2D | 6 6 2.6s Test Summary: | Pass Total Time HalfZScore 2D | 6 6 1.8s Test Summary: | Pass Total Time RobustHalfZScore 2D | 6 6 0.3s Test Summary: | Pass Total Time 3D normalization | 20 20 11.2s Test Summary: | Pass Total Time Sigmoid | 9 9 2.8s Test Summary: | Pass Total Time RobustSigmoid | 9 9 2.3s Test Summary: | Pass Total Time Nansafe | 8 8 1.9s Test Summary: | Pass Total Time NaNZScore | 9 9 2.0s Test Summary: | Pass Total Time NaNSigmoid | 9 9 1.5s Test Summary: | Pass Total Time ND normalization | 80 80 39.8s Test Summary: | Pass Total Time Unitful Normalization compat | 5 5 7.7s Test Summary: | Pass Total Time DimensionalData compat | 28 28 24.7s Test Summary: | Pass Total Time StatsBase comparison | 1 1 5.2s Normalization.jl (in-place) BenchmarkTools.Trial: 18 samples with 1 evaluation per sample. Range (min … max): 184.931 ms … 194.406 ms ┊ GC (min … max): 0.00% … 0.00% Time (median): 187.716 ms ┊ GC (median): 0.00% Time (mean ± σ): 188.014 ms ± 2.097 ms ┊ GC (mean ± σ): 0.00% ± 0.00% ▃ ▃ █ ▇▁▁▁▁▁▁▁▁▇█▇█▁▇▁▁▇█▁▁▁▇▇▁▁▁▁▇▁▁▁▁▇▇▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▇ ▁ 185 ms Histogram: frequency by time 194 ms < Memory estimate: 159.80 KiB, allocs estimate: 89. Normalization.jl (out-of-place) BenchmarkTools.Trial: 14 samples with 1 evaluation per sample. Range (min … max): 265.319 ms … 327.652 ms ┊ GC (min … max): 0.67% … 17.79% Time (median): 269.605 ms ┊ GC (median): 0.70% Time (mean ± σ): 282.770 ms ± 22.545 ms ┊ GC (mean ± σ): 4.01% ± 5.65% █ ▃ ▃ █▇▇█▇▁▁▁▇▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▇▁▇▁▁▁▇▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁█ ▁ 265 ms Histogram: frequency by time 328 ms < Memory estimate: 76.45 MiB, allocs estimate: 92. StatsBase.jl BenchmarkTools.Trial: 20 samples with 1 evaluation per sample. Range (min … max): 136.396 ms … 198.642 ms ┊ GC (min … max): 0.00% … 28.94% Time (median): 141.393 ms ┊ GC (median): 1.29% Time (mean ± σ): 148.566 ms ± 18.030 ms ┊ GC (mean ± σ): 4.62% ± 8.82% ▃██ ▃ ▃ ███▇▇█▁▁▁█▁▁▇▇▇▁▁▁▁▁▁▁▁▁▁▁▇▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▁▇▇ ▁ 136 ms Histogram: frequency by time 199 ms < Memory estimate: 76.45 MiB, allocs estimate: 17. Test Summary: | Pass Total Time DataFrames ext | 20 20 9.9s Testing Normalization tests passed Testing completed after 422.64s PkgEval succeeded after 545.22s