Package evaluation of GlobalSensitivityAnalysis on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T03:39:45.027 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.92s ################################################################################ # Installation # Installing GlobalSensitivityAnalysis... Resolving package versions... Installed oneTBB_jll ──────────────── v2022.0.0+0 Installed IrrationalConstants ─────── v0.2.4 Installed Rmath ───────────────────── v0.8.0 Installed Adapt ───────────────────── v4.3.0 Installed HypergeometricFunctions ─── v0.3.28 Installed OffsetArrays ────────────── v1.17.0 Installed Preferences ─────────────── v1.4.3 Installed PtrArrays ───────────────── v1.3.0 Installed StatsFuns ───────────────── v1.5.0 Installed PDMats ──────────────────── v0.11.34 Installed DataAPI ─────────────────── v1.16.0 Installed MKL_jll ─────────────────── v2025.0.1+1 Installed FFTW ────────────────────── v1.8.1 Installed SpecialFunctions ────────── v2.5.1 Installed StaticArraysCore ────────── v1.4.3 Installed ProgressMeter ───────────── v1.10.4 Installed JLLWrappers ─────────────── v1.7.0 Installed AbstractFFTs ────────────── v1.5.0 Installed StaticArrays ────────────── v1.9.13 Installed PrecompileTools ─────────── v1.3.2 Installed KernelDensity ───────────── v0.6.9 Installed OrderedCollections ──────── v1.8.0 Installed DelimitedFiles ──────────── v1.9.1 Installed QuadGK ──────────────────── v2.11.2 Installed ChainRulesCore ──────────── v1.25.1 Installed Rmath_jll ───────────────── v0.5.1+0 Installed Reexport ────────────────── v1.2.2 Installed FillArrays ──────────────── v1.13.0 Installed Interpolations ──────────── v0.15.1 Installed Ratios ──────────────────── v0.4.5 Installed AxisAlgorithms ──────────── v1.1.0 Installed Statistics ──────────────── v1.11.1 Installed Requires ────────────────── v1.3.1 Installed LogExpFunctions ─────────── v0.3.29 Installed Sobol ───────────────────── v1.5.0 Installed IntelOpenMP_jll ─────────── v2025.0.4+0 Installed DataStructures ──────────── v0.18.22 Installed FFTW_jll ────────────────── v3.3.11+0 Installed AliasTables ─────────────── v1.1.3 Installed StatsAPI ────────────────── v1.7.0 Installed OpenSpecFun_jll ─────────── v0.5.6+0 Installed Compat ──────────────────── v4.16.0 Installed WoodburyMatrices ────────── v1.0.0 Installed Distributions ───────────── v0.25.119 Installed Missings ────────────────── v1.2.0 Installed StatsBase ───────────────── v0.34.4 Installed SortingAlgorithms ───────── v1.2.1 Installed DocStringExtensions ─────── v0.9.4 Installed Trapz ───────────────────── v2.0.3 Installed GlobalSensitivityAnalysis ─ v1.2.0 Installing 4 artifacts Installed artifact oneTBB 435.6 KiB Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Updating `~/.julia/environments/v1.13/Project.toml` [1b10255b] + GlobalSensitivityAnalysis v1.2.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [621f4979] + AbstractFFTs v1.5.0 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [13072b0f] + AxisAlgorithms v1.1.0 [d360d2e6] + ChainRulesCore v1.25.1 [34da2185] + Compat v4.16.0 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [7a1cc6ca] + FFTW 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[1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Installation completed after 9.7s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 5747.2 ms ✓ TestEnv 1 dependency successfully precompiled in 6 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 550.21s ################################################################################ # Testing # Testing GlobalSensitivityAnalysis Status `/tmp/jl_ce7npf/Project.toml` [5d742f6a] CSVFiles v1.0.2 [a93c6f00] DataFrames v1.7.0 [864edb3b] DataStructures v0.18.22 [31c24e10] Distributions v0.25.119 [1b10255b] GlobalSensitivityAnalysis v1.2.0 [5ab0869b] KernelDensity v0.6.9 [92933f4c] ProgressMeter v1.10.4 [ed01d8cd] Sobol v1.5.0 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.4 [592b5752] Trapz v2.0.3 [8ba89e20] Distributed v1.11.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_ce7npf/Manifest.toml` [621f4979] AbstractFFTs v1.5.0 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [13072b0f] AxisAlgorithms v1.1.0 [d1d4a3ce] BitFlags v0.1.9 [5d742f6a] CSVFiles v1.0.2 [d360d2e6] ChainRulesCore v1.25.1 [944b1d66] CodecZlib v0.7.8 [34da2185] Compat v4.16.0 [f0e56b4a] ConcurrentUtilities v2.5.0 [187b0558] ConstructionBase v1.5.8 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[3f19e933] p7zip_jll v17.5.0+2 Testing Running tests... [ Info: test_utils.jl Test Summary: | Pass Total Time Test Utils | 2 2 7.2s [ Info: sobol/test_sobol_sobolsequence.jl [ Info: sobol/test_sobol_ishigami.jl ┌ Warning: `Progress(n::Integer, dt::Real, desc::AbstractString = "Progress: ", barlen = nothing, color::Symbol = :green, output::IO = stderr; offset::Integer = 0)` is deprecated, use `Progress(n; dt = dt, desc = desc, barlen = barlen, color = color, output = output, offset = offset)` instead. │ caller = ip:0x0 └ @ Core :-1 Compare to SALib.py: Error During Test at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:11 Got exception outside of a @test LoadError: MethodError: no method matching mapreduce_impl(::Statistics.var"#centralizedabs2fun##0#centralizedabs2fun##1"{Float64}, ::typeof(+), ::Vector{Float64}, ::Int64, ::Int64) The function `mapreduce_impl` exists, but no method is defined for this combination of argument types. Closest candidates are: mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer, !Matched::Int64) @ Base reduce.jl:263 mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:286 mapreduce_impl(::Any, !Matched::Union{typeof(max), typeof(min)}, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:649 ... Stacktrace: [1] centralize_sumabs2(A::Vector{Float64}, m::Float64, ifirst::Int64, ilast::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:257 [2] centralize_sumabs2!(R::Vector{Float64}, A::Vector{Float64}, means::Vector{Float64}) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:275 [3] varm!(R::Vector{Float64}, A::Vector{Float64}, m::Vector{Float64}; corrected::Bool) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:309 [4] varm! @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:304 [inlined] [5] _varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:341 [inlined] [6] varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:339 [inlined] [7] _var(A::Vector{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:386 [8] var @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:380 [inlined] [9] first_order(A::Vector{Float64}, AB::Vector{Float64}, B::Vector{Float64}) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:165 [10] analyze(data::SobolData, model_output::Matrix{Float64}; num_resamples::Int64, conf_level::Float64, progress_meter::Bool, N_override::Nothing) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:106 [11] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_ishigami.jl:37 [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [13] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:11 [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [15] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:12 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [17] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:16 [inlined] [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [19] top-level scope @ none:6 [20] eval(m::Module, e::Any) @ Core ./boot.jl:489 [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:297 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_ishigami.jl:1 [ Info: sobol/test_sobol_unit.jl Unit Testing: Error During Test at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:25 Got exception outside of a @test LoadError: MethodError: no method matching mapreduce_impl(::Statistics.var"#centralizedabs2fun##0#centralizedabs2fun##1"{Float64}, ::typeof(+), ::Vector{Float64}, ::Int64, ::Int64) The function `mapreduce_impl` exists, but no method is defined for this combination of argument types. Closest candidates are: mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer, !Matched::Int64) @ Base reduce.jl:263 mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:286 mapreduce_impl(::Any, !Matched::Union{typeof(max), typeof(min)}, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:649 ... Stacktrace: [1] centralize_sumabs2(A::Vector{Float64}, m::Float64, ifirst::Int64, ilast::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:257 [2] centralize_sumabs2!(R::Vector{Float64}, A::Vector{Float64}, means::Vector{Float64}) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:275 [3] varm!(R::Vector{Float64}, A::Vector{Float64}, m::Vector{Float64}; corrected::Bool) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:309 [4] varm! @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:304 [inlined] [5] _varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:341 [inlined] [6] varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:339 [inlined] [7] _var(A::Vector{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:386 [8] var @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:380 [inlined] [9] first_order(A::Vector{Float64}, AB::Vector{Float64}, B::Vector{Float64}) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:165 [10] analyze(data::SobolData, model_output::Matrix{Float64}; num_resamples::Int64, conf_level::Float64, progress_meter::Bool, N_override::Nothing) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:106 [11] analyze(data::SobolData, model_output::Matrix{Float64}) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:36 [12] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_unit.jl:69 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [14] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:11 [15] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [16] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:26 [inlined] [17] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [18] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:27 [inlined] [19] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [20] top-level scope @ none:6 [21] eval(m::Module, e::Any) @ Core ./boot.jl:489 [22] exec_options(opts::Base.JLOptions) @ Base ./client.jl:297 [23] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_unit.jl:1 [ Info: sobol/test_sobol_regression.jl Regression Testing: Error During Test at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:30 Got exception outside of a @test LoadError: MethodError: no method matching mapreduce_impl(::Statistics.var"#centralizedabs2fun##0#centralizedabs2fun##1"{Float64}, ::typeof(+), ::Vector{Float64}, ::Int64, ::Int64) The function `mapreduce_impl` exists, but no method is defined for this combination of argument types. Closest candidates are: mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer, !Matched::Int64) @ Base reduce.jl:263 mapreduce_impl(::Any, ::Any, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:286 mapreduce_impl(::Any, !Matched::Union{typeof(max), typeof(min)}, ::Union{Base.AbstractBroadcasted, AbstractArray}, ::Any, ::Integer, !Matched::Integer) @ Base reduce.jl:649 ... Stacktrace: [1] centralize_sumabs2(A::Vector{Float64}, m::Float64, ifirst::Int64, ilast::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:257 [2] centralize_sumabs2!(R::Vector{Float64}, A::Vector{Float64}, means::Vector{Float64}) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:275 [3] varm!(R::Vector{Float64}, A::Vector{Float64}, m::Vector{Float64}; corrected::Bool) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:309 [4] varm! @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:304 [inlined] [5] _varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:341 [inlined] [6] varm @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:339 [inlined] [7] _var(A::Vector{Float64}, corrected::Bool, mean::Nothing, dims::Int64) @ Statistics ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:386 [8] var @ ~/.julia/packages/Statistics/gbcbG/src/Statistics.jl:380 [inlined] [9] first_order(A::Vector{Float64}, AB::Vector{Float64}, B::Vector{Float64}) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:165 [10] analyze(data::SobolData, model_output::Matrix{Float64}; num_resamples::Int64, conf_level::Float64, progress_meter::Bool, N_override::Nothing) @ GlobalSensitivityAnalysis ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/src/analyze_sobol.jl:106 [11] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_regression.jl:26 [12] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [13] top-level scope @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:11 [14] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [15] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:31 [inlined] [16] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [17] macro expansion @ ~/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:32 [inlined] [18] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [19] top-level scope @ none:6 [20] eval(m::Module, e::Any) @ Core ./boot.jl:489 [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:297 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/sobol/test_sobol_regression.jl:1 Test Summary: | Pass Error Total Time Test Sobol Method | 26 3 29 2m24.8s Compare to SALib.py | 10 1 11 2m06.8s Unit Testing | 16 1 17 16.2s Regression Testing | 1 1 1.7s RNG of the outermost testset: Random.Xoshiro(0xfd74aee8f0c3bc13, 0x7c53ff565e34aca6, 0xac87a96eacafbff9, 0xf0ff2d335e6cc023, 0x6811387cffc9c2d7) ERROR: LoadError: Some tests did not pass: 26 passed, 0 failed, 3 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/GlobalSensitivityAnalysis/MtXEG/test/runtests.jl:9 Testing failed after 169.01s ERROR: LoadError: Package GlobalSensitivityAnalysis errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2414 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2269 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:486 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [12] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 891.15s: package tests unexpectedly errored