Package evaluation of DeconvOptim on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T06:29:19.166


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 7.91s


################################################################################
# Installation
#

Installing DeconvOptim...
   Resolving package versions...
    Updating `~/.julia/environments/v1.13/Project.toml`
  [03e7cd2f] + DeconvOptim v0.7.4
    Updating `~/.julia/environments/v1.13/Manifest.toml`
  [47edcb42] + ADTypes v1.14.0
  [621f4979] + AbstractFFTs v1.5.0
  [79e6a3ab] + Adapt v4.3.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.18.0
  [13072b0f] + AxisAlgorithms v1.1.0
  [082447d4] + ChainRules v1.72.3
  [d360d2e6] + ChainRulesCore v1.25.1
  [3da002f7] + ColorTypes v0.12.1
  [c3611d14] + ColorVectorSpace v0.11.0
  [5ae59095] + Colors v0.13.0
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.16.0
  [187b0558] + ConstructionBase v1.5.8
  [9a962f9c] + DataAPI v1.16.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [03e7cd2f] + DeconvOptim v0.7.4
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [a0c0ee7d] + DifferentiationInterface v0.6.52
  [ffbed154] + DocStringExtensions v0.9.4
  [4e289a0a] + EnumX v1.0.5
  [7a1cc6ca] + FFTW v1.8.1
  [1a297f60] + FillArrays v1.13.0
  [6a86dc24] + FiniteDiff v2.27.0
  [53c48c17] + FixedPointNumbers v0.8.5
  [f6369f11] + ForwardDiff v1.0.1
  [46192b85] + GPUArraysCore v0.2.0
  [7869d1d1] + IRTools v0.4.14
  [a09fc81d] + ImageCore v0.10.5
  [a98d9a8b] + Interpolations v0.15.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [d3d80556] + LineSearches v7.3.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [1914dd2f] + MacroTools v0.5.16
  [dbb5928d] + MappedArrays v0.4.2
  [e1d29d7a] + Missings v1.2.0
  [e94cdb99] + MosaicViews v0.3.4
  [d41bc354] + NLSolversBase v7.9.1
  [77ba4419] + NaNMath v1.1.3
  [81d43f40] + Noise v0.3.3
  [6fe1bfb0] + OffsetArrays v1.17.0
  [429524aa] + Optim v1.12.0
  [bac558e1] + OrderedCollections v1.8.0
  [5432bcbf] + PaddedViews v0.5.12
  [d96e819e] + Parameters v0.12.3
  [e409e4f3] + PoissonRandom v0.4.4
  [85a6dd25] + PositiveFactorizations v0.2.4
  [aea7be01] + PrecompileTools v1.3.2
  [21216c6a] + Preferences v1.4.3
  [43287f4e] + PtrArrays v1.3.0
  [c84ed2f1] + Ratios v0.4.5
  [c1ae055f] + RealDot v0.1.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [efcf1570] + Setfield v1.1.2
  [a2af1166] + SortingAlgorithms v1.2.1
  [dc90abb0] + SparseInverseSubset v0.1.2
  [276daf66] + SpecialFunctions v2.5.1
  [cae243ae] + StackViews v0.1.1
  [90137ffa] + StaticArrays v1.9.13
  [1e83bf80] + StaticArraysCore v1.4.3
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [09ab397b] + StructArrays v0.7.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [62fd8b95] + TensorCore v0.1.1
  [bc48ee85] + Tullio v0.3.8
  [3a884ed6] + UnPack v1.0.2
  [efce3f68] + WoodburyMatrices v1.0.0
  [e88e6eb3] + Zygote v0.7.6
  [700de1a5] + ZygoteRules v0.2.7
  [f5851436] + FFTW_jll v3.3.11+0
  [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0
  [856f044c] + MKL_jll v2025.0.1+1
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [1317d2d5] + oneTBB_jll v2022.0.0+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] + LazyArtifacts v1.11.0
  [b27032c2] + LibCURL v0.6.4
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.12.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] + LibCURL_jll v8.12.1+1
  [e37daf67] + LibGit2_jll v1.9.0+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2024.12.31
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [458c3c95] + OpenSSL_jll v3.0.16+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
  [8e850ede] + nghttp2_jll v1.65.0+0
  [3f19e933] + p7zip_jll v17.5.0+2

Installation completed after 4.07s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...

Precompiling package dependencies...
ERROR: LoadError: The following 4 direct dependencies failed to precompile:

ZygoteColorsExt 

Failed to precompile ZygoteColorsExt [e68c091a-8ea5-5ca7-be4f-380657d4ad79] to "/home/pkgeval/.julia/compiled/v1.13/ZygoteColorsExt/jl_UQP7vn" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_luOXF1" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/ext/ZygoteColorsExt.jl:3
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [24] include_string
    @ ./loading.jl:2834 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [26] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/ext/ZygoteColorsExt.jl:1
in expression starting at stdin:5
DeconvOptim 

Failed to precompile DeconvOptim [03e7cd2f-1a03-4ea9-b59b-760a446df67f] to "/home/pkgeval/.julia/compiled/v1.13/DeconvOptim/jl_pqDHYQ" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_LNPJW8" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
 [19] top-level scope
    @ ~/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:38
 [20] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [22] top-level scope
    @ stdin:5
 [23] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [25] include_string
    @ ./loading.jl:2834 [inlined]
 [26] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [27] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/regularizer.jl:1
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:1
in expression starting at stdin:5

Zygote 

Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_WibRQS" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5

ZygoteDistancesExt 

Failed to precompile ZygoteDistancesExt [5865c103-18d1-586a-9b11-010bbc2260a8] to "/home/pkgeval/.julia/compiled/v1.13/ZygoteDistancesExt/jl_Pxo1Is" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_mPMvkP" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/ext/ZygoteDistancesExt.jl:3
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [24] include_string
    @ ./loading.jl:2834 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [26] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/ext/ZygoteDistancesExt.jl:1
in expression starting at stdin:5
in expression starting at /PkgEval.jl/scripts/precompile.jl:37

Precompilation failed after 219.93s



################################################################################
# Testing
#

     Testing DeconvOptim
      Status `/tmp/jl_Iuepr2/Project.toml`
  [d360d2e6] ChainRulesCore v1.25.1
  [03e7cd2f] DeconvOptim v0.7.4
  [7a1cc6ca] FFTW v1.8.1
  [1a297f60] FillArrays v1.13.0
  [6218d12a] ImageMagick v1.4.1
  [a98d9a8b] Interpolations v0.15.1
  [d3d80556] LineSearches v7.3.0
  [81d43f40] Noise v0.3.3
  [429524aa] Optim v1.12.0
  [aea7be01] PrecompileTools v1.3.2
  [ae029012] Requires v1.3.1
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.4
  [5e47fb64] TestImages v1.9.0
  [bc48ee85] Tullio v0.3.8
  [e88e6eb3] Zygote v0.7.6
  [37e2e46d] LinearAlgebra v1.12.0
  [44cfe95a] Pkg v1.12.0
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_Iuepr2/Manifest.toml`
  [47edcb42] ADTypes v1.14.0
  [621f4979] AbstractFFTs v1.5.0
  [79e6a3ab] Adapt v4.3.0
  [66dad0bd] AliasTables v1.1.3
  [4fba245c] ArrayInterface v7.18.0
  [13072b0f] AxisAlgorithms v1.1.0
  [39de3d68] AxisArrays v0.4.7
  [fa961155] CEnum v0.5.0
  [082447d4] ChainRules v1.72.3
  [d360d2e6] ChainRulesCore v1.25.1
  [3da002f7] ColorTypes v0.12.1
  [c3611d14] ColorVectorSpace v0.11.0
  [5ae59095] Colors v0.13.0
  [bbf7d656] CommonSubexpressions v0.3.1
  [34da2185] Compat v4.16.0
  [187b0558] ConstructionBase v1.5.8
  [9a962f9c] DataAPI v1.16.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [03e7cd2f] DeconvOptim v0.7.4
  [163ba53b] DiffResults v1.1.0
  [b552c78f] DiffRules v1.15.1
  [a0c0ee7d] DifferentiationInterface v0.6.52
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.4
  [4e289a0a] EnumX v1.0.5
  [7a1cc6ca] FFTW v1.8.1
  [5789e2e9] FileIO v1.17.0
  [1a297f60] FillArrays v1.13.0
  [6a86dc24] FiniteDiff v2.27.0
  [53c48c17] FixedPointNumbers v0.8.5
  [f6369f11] ForwardDiff v1.0.1
  [46192b85] GPUArraysCore v0.2.0
  [7869d1d1] IRTools v0.4.14
  [2803e5a7] ImageAxes v0.6.12
  [c817782e] ImageBase v0.1.7
  [a09fc81d] ImageCore v0.10.5
  [82e4d734] ImageIO v0.6.9
  [6218d12a] ImageMagick v1.4.1
  [bc367c6b] ImageMetadata v0.9.10
  [9b13fd28] IndirectArrays v1.0.0
  [d25df0c9] Inflate v0.1.5
  [a98d9a8b] Interpolations v0.15.1
  [8197267c] IntervalSets v0.7.11
  [92d709cd] IrrationalConstants v0.2.4
  [c8e1da08] IterTools v1.10.0
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [b835a17e] JpegTurbo v0.1.6
  [8cdb02fc] LazyModules v0.3.1
  [d3d80556] LineSearches v7.3.0
  [2ab3a3ac] LogExpFunctions v0.3.29
  [1914dd2f] MacroTools v0.5.16
  [dbb5928d] MappedArrays v0.4.2
  [e1d29d7a] Missings v1.2.0
  [e94cdb99] MosaicViews v0.3.4
  [d41bc354] NLSolversBase v7.9.1
  [77ba4419] NaNMath v1.1.3
  [f09324ee] Netpbm v1.1.1
  [81d43f40] Noise v0.3.3
  [6fe1bfb0] OffsetArrays v1.17.0
  [52e1d378] OpenEXR v0.3.3
  [429524aa] Optim v1.12.0
  [bac558e1] OrderedCollections v1.8.0
  [f57f5aa1] PNGFiles v0.4.4
  [5432bcbf] PaddedViews v0.5.12
  [d96e819e] Parameters v0.12.3
  [eebad327] PkgVersion v0.3.3
  [e409e4f3] PoissonRandom v0.4.4
  [85a6dd25] PositiveFactorizations v0.2.4
  [aea7be01] PrecompileTools v1.3.2
  [21216c6a] Preferences v1.4.3
  [92933f4c] ProgressMeter v1.10.4
  [43287f4e] PtrArrays v1.3.0
  [4b34888f] QOI v1.0.1
  [b3c3ace0] RangeArrays v0.3.2
  [c84ed2f1] Ratios v0.4.5
  [c1ae055f] RealDot v0.1.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [fdea26ae] SIMD v3.7.1
  [efcf1570] Setfield v1.1.2
  [699a6c99] SimpleTraits v0.9.4
  [45858cf5] Sixel v0.1.3
  [a2af1166] SortingAlgorithms v1.2.1
  [dc90abb0] SparseInverseSubset v0.1.2
  [276daf66] SpecialFunctions v2.5.1
  [cae243ae] StackViews v0.1.1
  [90137ffa] StaticArrays v1.9.13
  [1e83bf80] StaticArraysCore v1.4.3
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [88034a9c] StringDistances v0.11.3
  [09ab397b] StructArrays v0.7.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [62fd8b95] TensorCore v0.1.1
  [5e47fb64] TestImages v1.9.0
  [731e570b] TiffImages v0.11.3
  [bc48ee85] Tullio v0.3.8
  [3a884ed6] UnPack v1.0.2
  [e3aaa7dc] WebP v0.1.3
  [efce3f68] WoodburyMatrices v1.0.0
  [e88e6eb3] Zygote v0.7.6
  [700de1a5] ZygoteRules v0.2.7
  [f5851436] FFTW_jll v3.3.11+0
  [61579ee1] Ghostscript_jll v9.55.0+4
  [59f7168a] Giflib_jll v5.2.3+0
  [c73af94c] ImageMagick_jll v7.1.1+1
  [905a6f67] Imath_jll v3.1.11+0
  [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0
  [aacddb02] JpegTurbo_jll v3.1.1+0
⌅ [88015f11] LERC_jll v3.0.0+1
  [7e76a0d4] Libglvnd_jll v1.7.1+1
⌅ [89763e89] Libtiff_jll v4.4.0+0
⌃ [d3a379c0] LittleCMS_jll v2.12.0+0
  [856f044c] MKL_jll v2025.0.1+1
  [18a262bb] OpenEXR_jll v3.2.4+0
⌃ [643b3616] OpenJpeg_jll v2.4.0+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [4f6342f7] Xorg_libX11_jll v1.8.12+0
  [0c0b7dd1] Xorg_libXau_jll v1.0.13+0
  [a3789734] Xorg_libXdmcp_jll v1.1.6+0
  [1082639a] Xorg_libXext_jll v1.3.7+0
  [c7cfdc94] Xorg_libxcb_jll v1.17.1+0
  [c5fb5394] Xorg_xtrans_jll v1.6.0+0
  [3161d3a3] Zstd_jll v1.5.7+1
  [b53b4c65] libpng_jll v1.6.47+0
  [075b6546] libsixel_jll v1.10.5+0
⌃ [c5f90fcd] libwebp_jll v1.4.0+0
  [1317d2d5] oneTBB_jll v2022.0.0+0
  [0dad84c5] ArgTools v1.1.2
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [8ba89e20] Distributed v1.11.0
  [f43a241f] Downloads v1.7.0
  [7b1f6079] FileWatching v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [4af54fe1] LazyArtifacts v1.11.0
  [b27032c2] LibCURL v0.6.4
  [76f85450] LibGit2 v1.11.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [ca575930] NetworkOptions v1.3.0
  [44cfe95a] Pkg v1.12.0
  [de0858da] Printf v1.11.0
  [3fa0cd96] REPL v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [1a1011a3] SharedArrays v1.11.0
  [6462fe0b] Sockets v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [4607b0f0] SuiteSparse
  [fa267f1f] TOML v1.0.3
  [a4e569a6] Tar v1.10.0
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [deac9b47] LibCURL_jll v8.12.1+1
  [e37daf67] LibGit2_jll v1.9.0+0
  [29816b5a] LibSSH2_jll v1.11.3+1
  [14a3606d] MozillaCACerts_jll v2024.12.31
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [458c3c95] OpenSSL_jll v3.0.16+0
  [bea87d4a] SuiteSparse_jll v7.10.1+0
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
  [8e850ede] nghttp2_jll v1.65.0+0
  [3f19e933] p7zip_jll v17.5.0+2
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading.
     Testing Running tests...
Precompiling packages...
           ✗ Zygote
           ✗ Zygote → ZygoteColorsExt
           ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt
Info Given DeconvOptim was explicitly requested, output will be shown live 
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_tRPEE8" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
 [19] top-level scope
    @ ~/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:38
 [20] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [22] top-level scope
    @ stdin:5
 [23] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [25] include_string
    @ ./loading.jl:2834 [inlined]
 [26] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [27] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/regularizer.jl:1
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:1
in expression starting at stdin:5
           ✗ DeconvOptim
  0 dependencies successfully precompiled in 140 seconds. 156 already precompiled.

ERROR: LoadError: The following 3 direct dependencies failed to precompile:

ZygoteColorsExt 

Failed to precompile ZygoteColorsExt [e68c091a-8ea5-5ca7-be4f-380657d4ad79] to "/home/pkgeval/.julia/compiled/v1.13/ZygoteColorsExt/jl_gQwOXs" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_s2GMut" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/ext/ZygoteColorsExt.jl:3
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [24] include_string
    @ ./loading.jl:2834 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [26] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/ext/ZygoteColorsExt.jl:1
in expression starting at stdin:5
DeconvOptim 

Failed to precompile DeconvOptim [03e7cd2f-1a03-4ea9-b59b-760a446df67f] to "/home/pkgeval/.julia/compiled/v1.13/DeconvOptim/jl_ajP4sn" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_tRPEE8" (ProcessExited(1)).
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3265
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2651
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#234
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3836
 [11] maybe_cachefile_lock
    @ ./loading.jl:3833 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2637
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2465
 [14] macro expansion
    @ ./loading.jl:2393 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2358
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2334
 [18] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
 [19] top-level scope
    @ ~/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:38
 [20] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [21] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
 [22] top-level scope
    @ stdin:5
 [23] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [24] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [25] include_string
    @ ./loading.jl:2834 [inlined]
 [26] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [27] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/regularizer.jl:1
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/src/DeconvOptim.jl:1
in expression starting at stdin:5

Zygote 

Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_wnow9x" (ProcessExited(1)).
WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.
  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.
  NOTE: This behavior may have differed in Julia versions prior to 1.12.
  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.
  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`.
WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote.
ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote`
Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value.
Stacktrace:
  [1] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
  [2] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:304
  [3] top-level scope
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85
  [4] macro expansion
    @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]
  [5] macro expansion
    @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined]
  [6] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:2978
  [8] top-level scope
    @ stdin:5
  [9] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2824
 [11] include_string
    @ ./loading.jl:2834 [inlined]
 [12] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:329
 [13] _start()
    @ Base ./client.jl:563
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13
in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1
in expression starting at stdin:5
in expression starting at /home/pkgeval/.julia/packages/DeconvOptim/bkC4F/test/runtests.jl:1

Testing failed after 149.68s

ERROR: LoadError: Package DeconvOptim errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2414
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2269 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:486
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:331
 [12] _start()
    @ Base ./client.jl:563
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 400.31s: package fails to precompile