Package evaluation of DaggerImageReconstruction on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T03:55:13.208 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing DaggerImageReconstruction... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [b99085f1] + DaggerImageReconstruction v0.1.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [a4b4fdbf] + AbstractImageReconstruction v0.5.0 [1520ce14] + AbstractTrees v0.4.5 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [34da2185] + Compat v4.16.0 [5060bff5] + ConcurrentCollections v0.1.1 [d58978e5] + Dagger v0.18.14 [b99085f1] + DaggerImageReconstruction v0.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [fab6aee4] + DistributedNext v1.0.0 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [1a297f60] + FillArrays v1.13.0 [86223c79] + Graphs v1.12.1 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [d25df0c9] + Inflate v0.1.5 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [8ac3fa9e] + LRUCache v1.6.2 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [f9f48841] + MemPool v0.4.12 [e1d29d7a] + Missings v1.2.0 [510215fc] + Observables v0.5.5 [a15396b6] + OnlineStats v1.7.1 [925886fa] + OnlineStatsBase v1.7.1 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.34 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [7e506255] + ScopedValues v1.3.0 [6c6a2e73] + Scratch v1.2.1 [699a6c99] + SimpleTraits v0.9.4 [a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.5.0 [ed4db957] + TaskLocalValues v0.1.2 [b189fb0b] + ThreadPools v2.1.1 [a526e669] + TimespanLogging v0.1.0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [de0858da] + Printf v1.11.0 [9abbd945] + Profile v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [8e850b90] + libblastrampoline_jll v5.12.0+0 Installation completed after 5.98s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ✗ Dagger ✗ Dagger → DistributionsExt ✗ DaggerImageReconstruction 0 dependencies successfully precompiled in 173 seconds. 82 already precompiled. ERROR: LoadError: The following 1 direct dependency failed to precompile: DaggerImageReconstruction Failed to precompile DaggerImageReconstruction [b99085f1-2f43-45a7-bd38-d511f4bff3b1] to "/home/pkgeval/.julia/compiled/v1.13/DaggerImageReconstruction/jl_rRJ4lH" (ProcessExited(1)). ERROR: LoadError: AssertionError: length(state.thunk_dict) == 1 Stacktrace: [1] top-level scope @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:85 [2] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [3] macro expansion @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:20 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [5] top-level scope @ ~/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:125 [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Dagger [d58978e5-989f-55fb-8d15-ea34adc7bf54] to "/home/pkgeval/.julia/compiled/v1.13/Dagger/jl_OJ33Tk" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:4 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 177.05s ################################################################################ # Loading # Loading DaggerImageReconstruction... Precompiling packages... ✗ Dagger ✗ Dagger → DistributionsExt Info Given DaggerImageReconstruction was explicitly requested, output will be shown live  ERROR: LoadError: AssertionError: length(state.thunk_dict) == 1 Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:85  [2] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [3] macro expansion  @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:20 [inlined]  [4] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [5] top-level scope  @ ~/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:125  [6] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2978  [8] top-level scope  @ stdin:5  [9] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [11] include_string  @ ./loading.jl:2834 [inlined]  [12] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [13] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Dagger [d58978e5-989f-55fb-8d15-ea34adc7bf54] to "/home/pkgeval/.julia/compiled/v1.13/Dagger/jl_R2JtdF" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3265  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2651  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1279  [8] #invokelatest_gr#234  @ ./reflection.jl:1287 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1281 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3836  [11] maybe_cachefile_lock  @ ./loading.jl:3833 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2637  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2465  [14] macro expansion  @ ./loading.jl:2393 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2358  [17] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2334  [18] top-level scope  @ ~/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:4  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [24] include_string  @ ./loading.jl:2834 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [26] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:1 in expression starting at stdin:5 ✗ DaggerImageReconstruction 0 dependencies successfully precompiled in 171 seconds. 82 already precompiled. ERROR: The following 1 direct dependency failed to precompile: DaggerImageReconstruction Failed to precompile DaggerImageReconstruction [b99085f1-2f43-45a7-bd38-d511f4bff3b1] to "/home/pkgeval/.julia/compiled/v1.13/DaggerImageReconstruction/jl_B1X0vr" (ProcessExited(1)). ERROR: LoadError: AssertionError: length(state.thunk_dict) == 1 Stacktrace: [1] top-level scope @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:85 [2] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [3] macro expansion @ ~/.julia/packages/Dagger/iu3Pz/src/precompile.jl:20 [inlined] [4] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [5] top-level scope @ ~/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:125 [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/precompile.jl:1 in expression starting at /home/pkgeval/.julia/packages/Dagger/iu3Pz/src/Dagger.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Dagger [d58978e5-989f-55fb-8d15-ea34adc7bf54] to "/home/pkgeval/.julia/compiled/v1.13/Dagger/jl_R2JtdF" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:4 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/DaggerImageReconstruction/Wp7fj/src/DaggerImageReconstruction.jl:1 in expression starting at stdin: Loading failed after 173.0s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using DaggerImageReconstruction'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 384.77s: package fails to precompile