Package evaluation of CompScienceMeshes on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T04:50:41.016 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.12s ################################################################################ # Installation # Installing CompScienceMeshes... Resolving package versions... Installed GmshTools ───────── v0.5.2 Installed CompScienceMeshes ─ v0.9.4 Updating `~/.julia/environments/v1.13/Project.toml` [3e66a162] + CompScienceMeshes v0.9.4 Updating `~/.julia/environments/v1.13/Manifest.toml` [5100927d] + ClusterTrees v0.2.1 [2b5bf9a6] + CollisionDetection v0.1.7 [861a8166] + Combinatorics v1.0.2 [3e66a162] + CompScienceMeshes v0.9.4 [34da2185] + Compat v4.16.0 [864edb3b] + DataStructures v0.18.22 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.4 [442a2c76] + FastGaussQuadrature v1.0.2 [82e2f556] + GmshTools v0.5.2 [92d709cd] + IrrationalConstants v0.2.4 [692b3bcd] + JLLWrappers v1.7.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [3da0fdf6] + MPIPreferences v0.1.11 [bac558e1] + OrderedCollections v1.8.0 [2ae35dd2] + Permutations v0.4.23 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [ae029012] + Requires v1.3.1 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [1c621080] + TestItems v1.0.0 [6e34b625] + Bzip2_jll v1.0.9+0 [83423d85] + Cairo_jll v1.18.5+0 [2e619515] + Expat_jll v2.6.5+0 [4fce6fc7] + FLTK_jll v1.3.8+0 [a3f928ae] + Fontconfig_jll v2.16.0+0 [d7e528f0] + FreeType2_jll v2.13.4+0 [bd17208b] + GLU_jll v9.0.1+0 [78b55507] + Gettext_jll v0.21.0+0 [7746bdde] + Glib_jll v2.84.0+0 ⌅ [0234f1f7] + HDF5_jll v1.14.3+3 [e33a78d0] + Hwloc_jll v2.12.0+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [1d63c593] + LLVMOpenMP_jll v18.1.8+0 [dd4b983a] + LZO_jll v2.10.3+0 [e9f186c6] + Libffi_jll v3.4.7+0 [7e76a0d4] + Libglvnd_jll v1.7.1+1 [94ce4f54] + Libiconv_jll v1.18.0+0 [4b2f31a3] + Libmount_jll v2.41.0+0 [38a345b3] + Libuuid_jll v2.41.0+0 [18c40d15] + LinearElasticity_jll v5.0.0+0 [d00139f3] + METIS_jll v5.1.3+0 [86086c02] + MMG_jll v5.6.0+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [baad4e97] + OCCT_jll v7.7.2+0 ⌅ [fe0851c0] + OpenMPI_jll v4.1.8+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [30392449] + Pixman_jll v0.44.2+0 ⌅ [a8d0f55d] + SCOTCH_jll v6.1.3+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [2c808117] + Xorg_libXft_jll v2.3.3+1 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [630162c2] + gmsh_jll v4.13.1+0 [477f73a3] + libaec_jll v1.1.3+0 [b53b4c65] + libpng_jll v1.6.47+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [781609d7] + GMP_jll v6.3.0+2 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Building GmshTools → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/299aa66053646db77f8aa7fafcebe0f9e5c0d1dc/build.log` Installation completed after 18.18s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... ┌ Warning: Could not use exact versions of packages in manifest, re-resolving └ @ TestEnv ~/.julia/packages/TestEnv/tgnBf/src/julia-1.11/activate_set.jl:63 Precompiling package dependencies... Precompilation completed after 88.01s ################################################################################ # Testing # Testing CompScienceMeshes Test Could not use exact versions of packages in manifest. Re-resolving dependencies Updating `/tmp/jl_xmUs0O/Project.toml` [3e66a162] + CompScienceMeshes v0.9.4 ⌅ [f8b46487] + TestItemRunner v0.2.3 ⌅ [1c621080] ↓ TestItems v1.0.0 ⇒ v0.1.1 [8dfed614] ~ Test ⇒ v1.11.0 Updating `/tmp/jl_xmUs0O/Manifest.toml` [3e66a162] + CompScienceMeshes v0.9.4 ⌅ [f8b46487] + TestItemRunner v0.2.3 ⌅ [1c621080] ↓ TestItems v1.0.0 ⇒ v0.1.1 [8dfed614] ~ Test ⇒ v1.11.0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Test Successfully re-resolved Status `/tmp/jl_xmUs0O/Project.toml` [5100927d] ClusterTrees v0.2.1 [2b5bf9a6] CollisionDetection v0.1.7 [861a8166] Combinatorics v1.0.2 [3e66a162] CompScienceMeshes v0.9.4 [34da2185] Compat v4.16.0 [864edb3b] DataStructures v0.18.22 [8bb1440f] DelimitedFiles v1.9.1 [442a2c76] FastGaussQuadrature v1.0.2 [82e2f556] GmshTools v0.5.2 [2ae35dd2] Permutations v0.4.23 [ae029012] Requires v1.3.1 [90137ffa] StaticArrays v1.9.13 ⌅ [f8b46487] TestItemRunner v0.2.3 ⌅ [1c621080] TestItems v0.1.1 [b77e0a4c] InteractiveUtils v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [2f01184e] SparseArrays v1.12.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_xmUs0O/Manifest.toml` [5100927d] ClusterTrees v0.2.1 [2b5bf9a6] CollisionDetection v0.1.7 [861a8166] Combinatorics v1.0.2 [3e66a162] CompScienceMeshes v0.9.4 [34da2185] Compat v4.16.0 [864edb3b] DataStructures v0.18.22 [8bb1440f] DelimitedFiles v1.9.1 [ffbed154] DocStringExtensions v0.9.4 [442a2c76] FastGaussQuadrature v1.0.2 [82e2f556] GmshTools v0.5.2 [92d709cd] IrrationalConstants v0.2.4 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [3da0fdf6] MPIPreferences v0.1.11 [bac558e1] OrderedCollections v1.8.0 [2ae35dd2] Permutations v0.4.23 [aea7be01] PrecompileTools v1.3.2 [21216c6a] Preferences v1.4.3 [ae029012] Requires v1.3.1 [276daf66] SpecialFunctions v2.5.1 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 ⌅ [f8b46487] TestItemRunner v0.2.3 ⌅ [1c621080] TestItems v0.1.1 [6e34b625] Bzip2_jll v1.0.9+0 [83423d85] Cairo_jll v1.18.5+0 [2e619515] Expat_jll v2.6.5+0 [4fce6fc7] FLTK_jll v1.3.8+0 [a3f928ae] Fontconfig_jll v2.16.0+0 [d7e528f0] FreeType2_jll v2.13.4+0 [bd17208b] GLU_jll v9.0.1+0 [78b55507] Gettext_jll v0.21.0+0 [7746bdde] Glib_jll v2.84.0+0 ⌅ [0234f1f7] HDF5_jll v1.14.3+3 [e33a78d0] Hwloc_jll v2.12.0+0 [aacddb02] JpegTurbo_jll v3.1.1+0 [1d63c593] LLVMOpenMP_jll v18.1.8+0 [dd4b983a] LZO_jll v2.10.3+0 [e9f186c6] Libffi_jll v3.4.7+0 [7e76a0d4] Libglvnd_jll v1.7.1+1 [94ce4f54] Libiconv_jll v1.18.0+0 [4b2f31a3] Libmount_jll v2.41.0+0 [38a345b3] Libuuid_jll v2.41.0+0 [18c40d15] LinearElasticity_jll v5.0.0+0 [d00139f3] METIS_jll v5.1.3+0 [86086c02] MMG_jll v5.6.0+0 [7cb0a576] MPICH_jll v4.3.0+1 [f1f71cc9] MPItrampoline_jll v5.5.3+0 [9237b28f] MicrosoftMPI_jll v10.1.4+3 [baad4e97] OCCT_jll v7.7.2+0 ⌅ [fe0851c0] OpenMPI_jll v4.1.8+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [30392449] Pixman_jll v0.44.2+0 ⌅ [a8d0f55d] SCOTCH_jll v6.1.3+0 ⌅ [02c8fc9c] XML2_jll v2.13.6+1 [4f6342f7] Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] Xorg_libXau_jll v1.0.13+0 [a3789734] Xorg_libXdmcp_jll v1.1.6+0 [1082639a] Xorg_libXext_jll v1.3.7+0 [d091e8ba] Xorg_libXfixes_jll v6.0.1+0 [2c808117] Xorg_libXft_jll v2.3.3+1 [d1454406] Xorg_libXinerama_jll v1.1.6+0 [ea2f1a96] Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] Xorg_libxcb_jll v1.17.1+0 [c5fb5394] Xorg_xtrans_jll v1.6.0+0 [630162c2] gmsh_jll v4.13.1+0 [477f73a3] libaec_jll v1.1.3+0 [b53b4c65] libpng_jll v1.6.47+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [781609d7] GMP_jll v6.3.0+2 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [efcefdf7] PCRE2_jll v10.44.0+1 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Generating a structured mesh: The dimensions of the cuboid are approximated by multiples of edge length. For exact dimensions and unstructured grids, use kwarg - generator = :gmsh Test Summary: | Pass Total Time boundary weld | 5 5 0.0s Generating a structured mesh: The dimensions of the cuboid are approximated by multiples of edge length. For exact dimensions and unstructured grids, use kwarg - generator = :gmsh Mesh file defined 3 physical entities: Target entity "Gamma01" is 1 out of 3. Mesh file defined 3 physical entities: Target entity "Gamma02" is 2 out of 3. Mesh file defined 3 physical entities: Target entity "Gamma12" is 3 out of 3. Mesh file defined 3 physical entities: Target entity "WorldsEnd" is 1 out of 3. Mesh file defined 3 physical entities: Target entity "Coast" is 2 out of 3. Mesh file defined 3 physical entities: Target entity "Sea" is 3 out of 3. ┌ Warning: Assignment to `tol` in soft scope is ambiguous because a global variable by the same name exists: `tol` will be treated as a new local. Disambiguate by using `local tol` to suppress this warning or `global tol` to assign to the existing global variable. └ @ ~/.julia/packages/CompScienceMeshes/5FpTR/test/test_geometry.jl:8 ┌ Warning: Assignment to `m1` in soft scope is ambiguous because a global variable by the same name exists: `m1` will be treated as a new local. Disambiguate by using `local m1` to suppress this warning or `global m1` to assign to the existing global variable. └ @ ~/.julia/packages/CompScienceMeshes/5FpTR/test/test_geometry.jl:17 Mesh file defined 5 physical entities: Target entity "ClosedBox" is 5 out of 5. Mesh file defined 5 physical entities: Target entity "TopPlate" is 1 out of 5. Mesh file defined 5 physical entities: Target entity "SidePlates" is 3 out of 5. Mesh file defined 5 physical entities: Target entity "BottomPlate" is 2 out of 5. Mesh file defined 5 physical entities: Target entity "OpenBox" is 4 out of 5. Mesh file defined 5 physical entities: Target entity "ClosedBox" is 5 out of 5. Mesh file defined 5 physical entities: Target entity "TopPlate" is 1 out of 5. Mesh file defined 5 physical entities: Target entity "SidePlates" is 3 out of 5. Mesh file defined 5 physical entities: Target entity "BottomPlate" is 2 out of 5. Mesh file defined 5 physical entities: Target entity "OpenBox" is 4 out of 5. ┌ Warning: Assignment to `sphere` in soft scope is ambiguous because a global variable by the same name exists: `sphere` will be treated as a new local. Disambiguate by using `local sphere` to suppress this warning or `global sphere` to assign to the existing global variable. └ @ ~/.julia/packages/CompScienceMeshes/5FpTR/test/test_mapper.jl:6 Generating a structured mesh: The dimensions of the cuboid are approximated by multiples of edge length. For exact dimensions and unstructured grids, use kwarg - generator = :gmsh Mesh file defined 5 physical entities: Target entity "ClosedBox" is 5 out of 5. Mesh file defined 5 physical entities: Target entity "OpenBox" is 4 out of 5. Test Summary: | Total Time i = 1 | 0 0.0s Test Summary: | Total Time i = 2 | 0 0.0s Test Summary: | Total Time i = 3 | 0 0.0s Test Summary: | Total Time i = 4 | 0 0.0s Test Summary: | Total Time i = 5 | 0 0.0s Test Summary: | Total Time i = 6 | 0 0.0s Test Summary: | Total Time i = 7 | 0 0.0s Test Summary: | Total Time i = 8 | 0 0.0s Test Summary: | Total Time i = 9 | 0 0.0s Generating a structured mesh: The dimensions of the cuboid are approximated by multiples of edge length. For exact dimensions and unstructured grids, use kwarg - generator = :gmsh clipped = StaticArraysCore.SVector{2, Float32}[[0.33333334, 0.33333334], [0.0, 0.0], [0.0, 0.0], [1.0, 0.0], [1.0, -0.0]] clippings[1] = StaticArraysCore.SVector{2, Float32}[[0.0, 0.0], [0.5, 0.5], [0.0, 1.0]] clippings[2] = StaticArraysCore.SVector{2, Float32}[] clippings[3] = StaticArraysCore.SVector{2, Float32}[[0.33333334, 0.33333334], [1.0, -0.0], [0.5, 0.5]] clipped = StaticArraysCore.SVector{2, Float64}[[0.3333333333333333, 0.3333333333333333], [0.0, 0.0], [0.0, 0.0], [1.0, 0.0], [1.0, -0.0]] clippings[1] = StaticArraysCore.SVector{2, Float64}[[0.0, 0.0], [0.5, 0.5], [0.0, 1.0]] clippings[2] = StaticArraysCore.SVector{2, Float64}[] clippings[3] = StaticArraysCore.SVector{2, Float64}[[0.3333333333333333, 0.3333333333333333], [1.0, -0.0], [0.5, 0.5]] clipped = StaticArraysCore.SVector{3, Float32}[[0.33333334, 0.33333334, 1.0], [0.0, 0.0, 1.0], [0.0, 0.0, 1.0], [1.0, 0.0, 1.0], [1.0, 0.0, 1.0]] clippings[1] = StaticArraysCore.SVector{3, Float32}[[0.0, 0.0, 1.0], [0.49999997, 0.49999997, 1.0], [0.0, 0.9999999, 1.0]] clippings[2] = StaticArraysCore.SVector{3, Float32}[] clippings[3] = StaticArraysCore.SVector{3, Float32}[[0.33333334, 0.33333334, 1.0], [1.0, 0.0, 1.0], [0.49999997, 0.49999997, 1.0]] clipped = StaticArraysCore.SVector{3, Float64}[[0.3333333333333333, 0.3333333333333333, 1.0], [0.0, 0.0, 1.0], [0.0, 0.0, 1.0], [1.0, 0.0, 1.0], [1.0, 0.0, 1.0]] clippings[1] = StaticArraysCore.SVector{3, Float64}[[0.0, 0.0, 1.0], [0.5, 0.5, 1.0], [0.0, 1.0, 1.0]] clippings[2] = StaticArraysCore.SVector{3, Float64}[] clippings[3] = StaticArraysCore.SVector{3, Float64}[[0.3333333333333333, 0.3333333333333333, 1.0], [1.0, 0.0, 1.0], [0.5, 0.5, 1.0]] cartesian(p) = [0.5, 0.5, 0.0] xleft = [0.0, 0.0004001601281281575, 0.0016025682249155015, 0.003613054160365725, 0.006441492829877382, 0.010102051443364402, 0.014613556019536122, 0.020000000000000018, 0.026291228706919578, 0.03352384841237599, 0.041742430504416006, 0.051001113587127056, 0.06136575601077382, 0.07291686991874763, 0.08575369645584047, 0.10000000000000003, 0.11581254575402916, 0.13339394440353286, 0.15301296854205065, 0.17503846381456167, 0.20000000000000012, 0.22870680067498944, 0.26251315825924176, 0.30404082057734594, 0.36000000000000026] xright = [1.0, 0.9995998398718718, 0.9983974317750846, 0.9963869458396343, 0.9935585071701226, 0.9898979485566356, 0.9853864439804638, 0.98, 0.9737087712930804, 0.966476151587624, 0.9582575694955839, 0.9489988864128729, 0.9386342439892261, 0.9270831300812523, 0.9142463035441595, 0.8999999999999999, 0.8841874542459709, 0.8666060555964672, 0.8469870314579493, 0.8249615361854383, 0.7999999999999998, 0.7712931993250105, 0.7374868417407583, 0.6959591794226541, 0.6399999999999997] Mesh file defined 5 physical entities: Target entity "ClosedBox" is 5 out of 5. (x1, n1) = ([0.08333333333333333, 0.08333333333333336, 0.0], [0.0, 0.0, -1.0]) (x2, n2) = ([0.0610042339643779, 0.0, 0.14433756729736985], [0.0, -1.0, 0.0]) Test Summary: | Pass Total Time Package | 115 115 21.5s Testing CompScienceMeshes tests passed Testing completed after 214.15s PkgEval succeeded after 354.24s