Package evaluation of ClimaLand on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T07:44:35.831 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 7.44s ################################################################################ # Installation # Installing ClimaLand... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [08f4d4ce] + ClimaLand v0.15.14 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [4fba245c] + ArrayInterface v7.18.0 [4c555306] + ArrayLayouts v1.11.1 [a9b6321e] + Atomix v1.1.1 [13072b0f] + AxisAlgorithms v1.1.0 [aae01518] + BandedMatrices v1.9.4 [8e7c35d0] + BlockArrays v1.6.3 ⌅ [179af706] + CFTime v0.1.4 [d360d2e6] + ChainRulesCore v1.25.1 [3a4d1b5c] + ClimaComms v0.6.6 [d414da3d] + ClimaCore v0.14.31 [1ecacbb8] + ClimaDiagnostics v0.2.13 [08f4d4ce] + ClimaLand v0.15.14 [b3f4f4ca] + ClimaUtilities v0.1.24 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.0 [1fbeeb36] + CommonDataModel v0.3.8 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [a8cc5b0e] + Crayons v4.1.1 [7445602f] + CubedSphere v0.3.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [3c3547ce] + DiskArrays v0.4.12 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [e2ba6199] + ExprTools v0.1.10 [55351af7] + ExproniconLite v0.10.14 [1a297f60] + FillArrays v1.13.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 [46192b85] + GPUArraysCore v0.2.0 [d54b0c1a] + GaussQuadrature v0.5.8 [88fa7841] + GilbertCurves v0.1.0 [f67ccb44] + HDF5 v0.17.2 [e98cc03f] + Insolation v0.9.4 [a98d9a8b] + Interpolations v0.15.1 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [ae98c720] + Jieko v0.2.1 [63c18a36] + KernelAbstractions v0.9.34 ⌅ [0b1a1467] + KrylovKit v0.8.3 [8ac3fa9e] + LRUCache v1.6.2 [b964fa9f] + LaTeXStrings v1.4.0 [9dccce8e] + LazyBroadcast v1.0.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.1.0 [3da0fdf6] + MPIPreferences v0.1.11 [1914dd2f] + MacroTools v0.5.16 [2e0e35c7] + Moshi v0.3.5 [c3c07f87] + MultiBroadcastFusion v0.3.3 [85f8d34a] + NCDatasets v0.14.7 [5da4648a] + NVTX v1.0.0 [77ba4419] + NaNMath v1.1.3 [6fe1bfb0] + OffsetArrays v1.17.0 [bac558e1] + OrderedCollections v1.8.0 [65ce6f38] + PackageExtensionCompat v1.0.2 [eebad327] + PkgVersion v0.3.3 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [731186ca] + RecursiveArrayTools v3.33.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [7181ea78] + RootSolvers v0.4.4 [7e49a35a] + RuntimeGeneratedFunctions v0.5.14 [0bca4576] + SciMLBase v2.86.2 [c0aeaf25] + SciMLOperators v0.3.13 [53ae85a6] + SciMLStructures v1.7.0 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [892a3eda] + StringManipulation v0.4.1 [49b00bb7] + SurfaceFluxes v0.12.0 [2efcf032] + SymbolicIndexingInterface v0.3.40 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 ⌅ [6aa5eb33] + TaylorSeries v0.18.5 [b60c26fb] + Thermodynamics v0.12.11 [0fe1646c] + UnrolledUtilities v0.1.9 [013be700] + UnsafeAtomics v0.3.0 ⌅ [409d34a3] + VectorInterface v0.4.9 [efce3f68] + WoodburyMatrices v1.0.0 [0b7ba130] + Blosc_jll v1.21.7+0 [6e34b625] + Bzip2_jll v1.0.9+0 [0234f1f7] + HDF5_jll v1.14.6+0 [e33a78d0] + Hwloc_jll v2.12.0+0 [9c1d0b0a] + JuliaNVTXCallbacks_jll v0.2.1+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [7cb0a576] + MPICH_jll v4.3.0+1 [f1f71cc9] + MPItrampoline_jll v5.5.3+0 [9237b28f] + MicrosoftMPI_jll v10.1.4+3 [e98f9f5b] + NVTX_jll v3.1.1+0 [7243133f] + NetCDF_jll v401.900.300+0 [fe0851c0] + OpenMPI_jll v5.0.7+2 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 [ffd25f8a] + XZ_jll v5.8.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [477f73a3] + libaec_jll v1.1.3+0 [337d8026] + libzip_jll v1.11.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 9.55s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... ERROR: LoadError: The following 3 direct dependencies failed to precompile: NeuralSnowExt Failed to precompile NeuralSnowExt [7a43ad42-dcfa-5a05-8c7e-8478daf83781] to "/home/pkgeval/.julia/compiled/v1.13/NeuralSnowExt/jl_0hA78h" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_GgBUs0" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/Flux/3711C/src/Flux.jl:22 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Flux/3711C/src/Flux.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Flux [587475ba-b771-5e3f-ad9e-33799f191a9c] to "/home/pkgeval/.julia/compiled/v1.13/Flux/jl_T7VyJ5" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/ClimaLand/SnT14/ext/neural_snow/NeuralSnow.jl:3 [19] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [20] top-level scope @ ~/.julia/packages/ClimaLand/SnT14/ext/NeuralSnowExt.jl:5 [21] include(mod::Module, _path::String) @ Base ./Base.jl:303 [22] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [23] top-level scope @ stdin:5 [24] eval(m::Module, e::Any) @ Core ./boot.jl:489 [25] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [26] include_string @ ./loading.jl:2834 [inlined] [27] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [28] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ClimaLand/SnT14/ext/neural_snow/NeuralSnow.jl:1 in expression starting at /home/pkgeval/.julia/packages/ClimaLand/SnT14/ext/NeuralSnowExt.jl:1 in expression starting at stdin:5 Flux Failed to precompile Flux [587475ba-b771-5e3f-ad9e-33799f191a9c] to "/home/pkgeval/.julia/compiled/v1.13/Flux/jl_0onzuR" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_k6fp1d" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/Flux/3711C/src/Flux.jl:22 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Flux/3711C/src/Flux.jl:1 in expression starting at stdin:5 SciMLBaseZygoteExt Failed to precompile SciMLBaseZygoteExt [392c259a-06a8-538e-8884-4698e7892fb5] to "/home/pkgeval/.julia/compiled/v1.13/SciMLBaseZygoteExt/jl_Ui9tG9" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] top-level scope @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:85 [4] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [5] macro expansion @ ~/.julia/packages/Zygote/HdT4O/src/Zygote.jl:68 [inlined] [6] include(mod::Module, _path::String) @ Base ./Base.jl:303 [7] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [8] top-level scope @ stdin:5 [9] eval(m::Module, e::Any) @ Core ./boot.jl:489 [10] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [11] include_string @ ./loading.jl:2834 [inlined] [12] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [13] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/HdT4O/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_TNoN6B" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/SciMLBase/7BHQj/ext/SciMLBaseZygoteExt.jl:3 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/SciMLBase/7BHQj/ext/SciMLBaseZygoteExt.jl:1 in expression starting at stdin:5 in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 901.94s ################################################################################ # Testing # Testing ClimaLand Status `/tmp/jl_tD0ugh/Project.toml` [4c88cf16] Aqua v0.8.11 [fbb218c0] BSON v0.3.9 [336ed68f] CSV v0.10.15 [29b5916a] ClimaAnalysis v0.5.17 [3a4d1b5c] ClimaComms v0.6.6 [d414da3d] ClimaCore v0.14.31 [1ecacbb8] ClimaDiagnostics v0.2.13 [08f4d4ce] ClimaLand v0.15.14 [5c42b081] ClimaParams v0.10.28 [595c0a79] ClimaTimeSteppers v0.8.3 [b3f4f4ca] ClimaUtilities v0.1.24 [a93c6f00] DataFrames v1.7.0 [8bb1440f] DelimitedFiles v1.9.1 [587475ba] Flux v0.16.3 [cd3eb016] HTTP v1.10.16 [e98cc03f] Insolation v0.9.4 [a98d9a8b] Interpolations v0.15.1 [85f8d34a] NCDatasets v0.14.7 [2774e3e8] NLsolve v4.5.1 [1bc83da4] SafeTestsets v0.1.0 [0bca4576] SciMLBase v2.86.2 [90137ffa] StaticArrays v1.9.13 [10745b16] Statistics v1.11.1 [2913bbd2] StatsBase v0.34.4 [49b00bb7] SurfaceFluxes v0.12.0 [b60c26fb] Thermodynamics v0.12.11 [56f22d72] Artifacts v1.11.0 [ade2ca70] Dates v1.11.0 [4af54fe1] LazyArtifacts v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [44cfe95a] Pkg v1.12.0 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_tD0ugh/Manifest.toml` [47edcb42] ADTypes v1.14.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt 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libzip_jll v1.11.3+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.7.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.12.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Possible type-piracy detected: [1] ClimaCore.MatrixFields.FieldMatrixWithSolver(Y::ClimaCore.Fields.FieldVector) @ ClimaLand ~/.julia/packages/ClimaLand/SnT14/src/shared_utilities/implicit_timestepping.jl:89 Aqua tests (additional): Test Failed at /home/pkgeval/.julia/packages/Aqua/epbUr/src/piracies.jl:240 Expression: isempty(v) Evaluated: isempty(Method[ClimaCore.MatrixFields.FieldMatrixWithSolver(Y::ClimaCore.Fields.FieldVector) @ ClimaLand ~/.julia/packages/ClimaLand/SnT14/src/shared_utilities/implicit_timestepping.jl:89]) Stacktrace: [1] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:731 [inlined] [2] test_piracies(m::Module; broken::Bool, kwargs::@Kwargs{}) @ Aqua ~/.julia/packages/Aqua/epbUr/src/piracies.jl:240 [3] test_piracies(m::Module) @ Aqua ~/.julia/packages/Aqua/epbUr/src/piracies.jl:217 [4] top-level scope @ ~/.julia/packages/ClimaLand/SnT14/test/aqua.jl:26 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] [6] macro expansion @ ~/.julia/packages/ClimaLand/SnT14/test/aqua.jl:31 [inlined] Test Summary: | Pass Fail Total Time Aqua tests | 9 1 10 1m12.1s Aqua tests (performance) | 2 2 3.7s Aqua tests (additional) | 7 1 8 40.9s julia | 1 1 0.1s Base.PkgId(Base.UUID("08f4d4ce-cf43-44bb-ad95-9d2d5f413532"), "ClimaLand") deps | 1 1 0.6s Base.PkgId(Base.UUID("08f4d4ce-cf43-44bb-ad95-9d2d5f413532"), "ClimaLand") extras | 1 1 0.0s Base.PkgId(Base.UUID("08f4d4ce-cf43-44bb-ad95-9d2d5f413532"), "ClimaLand") weakdeps | 1 1 0.0s RNG of the outermost testset: Random.Xoshiro(0x6ef8781f3b47f228, 0x94b1a62ae1adf218, 0xf03d3745a4e9366a, 0x640389e338852abd, 0x9a584432a48403ad) ERROR: LoadError: Some tests did not pass: 9 passed, 1 failed, 0 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/ClimaLand/SnT14/test/runtests.jl:6 Testing failed after 88.23s ERROR: LoadError: Package ClimaLand errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2414 [3] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/Operations.jl:2269 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:486 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.13/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [12] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 1033.63s: package fails to precompile