Package evaluation of BioMakie on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T14:15:19.381 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing BioMakie... Resolving package versions... Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed libdecor_jll ──────────────── v0.2.2+0 Installed x265_jll ──────────────────── v4.1.0+0 Installed ImageIO ───────────────────── v0.6.9 Installed BioGenerics ───────────────── v0.1.5 Installed AxisArrays ────────────────── v0.4.7 Installed OffsetArrays ──────────────── v1.17.0 Installed Libmount_jll ──────────────── v2.41.0+0 Installed libfdk_aac_jll ────────────── v2.0.3+0 Installed TiffImages ────────────────── v0.11.3 Installed LERC_jll ──────────────────── v4.0.1+0 Installed JpegTurbo ─────────────────── v0.1.6 Installed HypergeometricFunctions ───── v0.3.28 Installed PNGFiles ──────────────────── v0.4.4 Installed Preferences ───────────────── v1.4.3 Installed Opus_jll ──────────────────── v1.3.3+0 Installed StatsFuns ─────────────────── v1.5.0 Installed LoggingExtras ─────────────── v1.1.0 Installed FFTW ──────────────────────── v1.8.1 Installed Accessors ─────────────────── v0.1.42 Installed Multisets ─────────────────── v0.4.5 Installed Xorg_xkbcomp_jll ──────────── v1.4.7+0 Installed RelocatableFolders ────────── v1.0.1 Installed Sixel ─────────────────────── v0.1.3 Installed Permutations ──────────────── v0.4.23 Installed StableHashTraits ──────────── v1.3.4 Installed Hyperscript ───────────────── v0.0.5 Installed PDMats ────────────────────── v0.11.34 Installed Unitful ───────────────────── v1.22.0 Installed ConcurrentUtilities ───────── v2.5.0 Installed EarCut_jll ────────────────── v2.2.4+0 Installed ProgressMeter ─────────────── v1.10.4 Installed Grisu ─────────────────────── v1.0.2 Installed Contour ───────────────────── v0.6.3 Installed GLMakie ───────────────────── v0.9.9 Installed StaticArrays ──────────────── v1.9.13 Installed OpenEXR ───────────────────── v0.3.3 Installed NearestNeighbors ──────────── v0.4.21 Installed PlotUtils ─────────────────── v1.4.3 Installed EnumX ─────────────────────── v1.0.5 Installed ModernGL ──────────────────── v1.1.8 Installed InitialValues ─────────────── v0.3.1 Installed OpenSSL ───────────────────── v1.4.3 Installed CEnum ─────────────────────── v0.5.0 Installed DelimitedFiles ────────────── v1.9.1 Installed BioSequences ──────────────── v3.4.1 Installed FileIO ────────────────────── v1.17.0 Installed InvertedIndices ───────────── v1.3.1 Installed Cairo_jll ─────────────────── v1.18.4+0 Installed Fontconfig_jll ────────────── v2.16.0+0 Installed HTTP ──────────────────────── v1.10.16 Installed IntelOpenMP_jll ───────────── v2025.0.4+0 Installed Statistics ────────────────── v1.11.1 Installed ColorSchemes ──────────────── v3.29.0 Installed Mods ──────────────────────── v2.2.6 Installed Xorg_libxkbfile_jll ───────── v1.1.3+0 Installed Polynomials ───────────────── v4.0.19 Installed Xorg_libXinerama_jll ──────── v1.1.6+0 Installed SignedDistanceFields ──────── v0.4.0 Installed Netpbm ────────────────────── v1.1.1 Installed ZygoteRules ───────────────── v0.2.7 Installed GPUArrays ─────────────────── v10.3.1 Installed FilePaths ─────────────────── v0.8.3 Installed EpollShim_jll ─────────────── v0.0.20230411+1 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed Distances ─────────────────── v0.10.12 Installed TableTraitsUtils ──────────── v1.0.2 Installed RoundingEmulator ──────────── v0.2.1 Installed Missings ──────────────────── v1.2.0 Installed TupleTools ────────────────── v1.6.0 Installed RealDot ───────────────────── v0.1.0 Installed FiniteDiff ────────────────── v2.27.0 Installed SIMD ──────────────────────── v3.7.1 Installed FastaIO ───────────────────── v1.1.0 Installed TriplotBase ───────────────── v0.1.0 Installed IRTools ───────────────────── v0.4.14 Installed IrrationalConstants ───────── v0.2.4 Installed Showoff ───────────────────── v1.0.3 Installed AutoHashEquals ────────────── v2.2.0 Installed LLVM ──────────────────────── v9.3.1 Installed Giflib_jll ────────────────── v5.2.3+0 Installed ArnoldiMethod ─────────────── v0.4.0 Installed JSON ──────────────────────── v0.21.4 Installed Pango_jll ─────────────────── v1.56.1+0 Installed AbstractLattices ──────────── v0.3.1 Installed PolygonOps ────────────────── v0.1.2 Installed GZip ──────────────────────── v0.6.2 Installed MathTeXEngine ─────────────── v0.5.7 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed SimpleRandom ──────────────── v0.3.2 Installed PtrArrays ─────────────────── v1.3.0 Installed ADTypes ───────────────────── v1.14.0 Installed Bessels ───────────────────── v0.2.8 Installed xkbcommon_jll ─────────────── v1.4.1+2 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed SimpleBufferStream ────────── v1.2.0 Installed QOI ───────────────────────── v1.0.1 Installed SpecialFunctions ──────────── v2.5.1 Installed XZ_jll ────────────────────── v5.8.1+0 Installed HarfBuzz_jll ──────────────── v8.5.0+0 Installed isoband_jll ───────────────── v0.2.3+0 Installed PkgVersion ────────────────── v0.3.3 Installed StringEncodings ───────────── v0.3.7 Installed BioSymbols ────────────────── v5.2.0 Installed TensorCast ────────────────── v0.4.8 Installed Zygote ────────────────────── v0.6.76 Installed PikaParser ────────────────── v0.6.1 Installed NaNMath ───────────────────── v1.1.3 Installed StaticArraysCore ──────────── v1.4.3 Installed MicroCollections ──────────── v0.2.0 Installed DefineSingletons ──────────── v0.1.2 Installed LZO_jll ───────────────────── v2.10.3+0 Installed StringViews ───────────────── v1.3.4 Installed WebP ──────────────────────── v0.1.3 Installed TranscodingStreams ────────── v0.11.3 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed NLSolversBase ─────────────── v7.9.1 Installed UnicodeFun ────────────────── v0.4.1 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed Graphics ──────────────────── v1.1.3 Installed MbedTLS ───────────────────── v1.1.9 Installed Graphs ────────────────────── v1.12.1 Installed SimpleGraphs ──────────────── v0.8.6 Installed GLFW_jll ──────────────────── v3.4.0+2 Installed ImageMetadata ─────────────── v0.9.10 Installed MolecularGraph ────────────── v0.16.1 Installed Ratios ────────────────────── v0.4.5 Installed x264_jll ──────────────────── v10164.0.1+0 Installed FreeType ──────────────────── v4.1.1 Installed DataStructures ────────────── v0.18.22 Installed MappedArrays ──────────────── v0.4.2 Installed Colors ────────────────────── v0.12.11 Installed CommonSubexpressions ──────── v0.3.1 Installed ChainRules ────────────────── v1.72.3 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed PaddedViews ───────────────── v0.5.12 Installed StridedViews ──────────────── v0.4.1 Installed DataValues ────────────────── v0.4.13 Installed BangBang ──────────────────── v0.4.4 Installed LinearAlgebraX ────────────── v0.2.10 Installed StatsAPI ──────────────────── v1.7.0 Installed Compat ────────────────────── v4.16.0 Installed GridLayoutBase ────────────── v0.10.2 Installed Lazy ──────────────────────── v0.15.1 Installed CodecZlib ─────────────────── v0.7.8 Installed LazyModules ───────────────── v0.3.1 Installed Automa ────────────────────── v1.1.0 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed MosaicViews ───────────────── v0.3.4 Installed libpng_jll ────────────────── v1.6.47+0 Installed StatsBase ─────────────────── v0.34.4 Installed StructTypes ───────────────── v1.11.0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed BioAlignments ─────────────── v3.1.0 Installed libaom_jll ────────────────── v3.11.0+0 Installed Dbus_jll ──────────────────── v1.16.2+0 Installed Scratch ───────────────────── v1.2.1 Installed ImageCore ─────────────────── v0.10.5 Installed ColorTypes ────────────────── v0.11.5 Installed TransmuteDims ─────────────── v0.1.16 Installed DiffRules ─────────────────── v1.15.1 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed Twiddle ───────────────────── v1.1.2 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed ArgCheck ──────────────────── v2.5.0 Installed SimplePartitions ──────────── v0.3.3 Installed NamedArrays ───────────────── v0.10.3 Installed JSON3 ─────────────────────── v1.14.2 Installed Zstd_jll ──────────────────── v1.5.7+1 Installed TensorCore ────────────────── v0.1.1 Installed FreeTypeAbstraction ───────── v0.10.6 Installed Expat_jll ─────────────────── v2.6.5+0 Installed TableTraits ───────────────── v1.0.1 Installed Isoband ───────────────────── v0.1.1 Installed DiffResults ───────────────── v1.1.0 Installed WeakKeyIdDicts ────────────── v0.1.0 Installed PositiveFactorizations ────── v0.2.4 Installed Inflate ───────────────────── v0.1.5 Installed Imath_jll ─────────────────── v3.1.11+0 Installed Parsers ───────────────────── v2.8.3 Installed ImageShow ─────────────────── v0.3.8 Installed Setfield ──────────────────── v1.1.2 Installed MKL_jll ───────────────────── v2025.0.1+1 Installed SplitApplyCombine ─────────── v1.2.3 Installed Extents ───────────────────── v0.1.5 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed Format ────────────────────── v1.3.7 Installed Packing ───────────────────── v0.5.1 Installed AbstractFFTs ──────────────── v1.5.0 Installed JLLWrappers ───────────────── v1.7.0 Installed Animations ────────────────── v0.4.2 Installed DataValueInterfaces ───────── v1.0.0 Installed LLVMExtra_jll ─────────────── v0.0.35+0 Installed ColorVectorSpace ──────────── v0.10.0 Installed ConstructionBase ──────────── v1.5.8 Installed Meshes ────────────────────── v0.43.5 Installed Libffi_jll ────────────────── v3.2.2+2 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed AbstractTrees ─────────────── v0.4.5 Installed OrderedCollections ────────── v1.8.0 Installed Indexing ──────────────────── v1.1.1 Installed ExactPredicates ───────────── v2.2.8 Installed ChainRulesCore ────────────── v1.25.1 Installed Ogg_jll ───────────────────── v1.3.5+1 Installed Colorfy ───────────────────── v0.1.6 Installed KernelDensity ─────────────── v0.6.9 Installed Combinatorics ─────────────── v1.0.2 Installed Xorg_libXi_jll ────────────── v1.8.3+0 Installed Interpolations ────────────── v0.15.1 Installed PairwiseListMatrices ──────── v0.11.1 Installed MeshIO ────────────────────── v0.4.13 Installed ArrayInterface ────────────── v7.18.0 Installed Reexport ──────────────────── v1.2.2 Installed LogExpFunctions ───────────── v0.3.29 Installed LineSearches ──────────────── v7.3.0 Installed Quaternions ───────────────── v0.7.6 Installed IntervalArithmetic ────────── v0.22.30 Installed StackViews ────────────────── v0.1.1 Installed AliasTables ───────────────── v1.1.3 Installed IntervalTrees ─────────────── v1.1.0 Installed Strided ───────────────────── v2.3.0 Installed RingLists ─────────────────── v0.2.9 Installed RangeArrays ───────────────── v0.3.2 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed PackageExtensionCompat ────── v1.0.2 Installed Rotations ─────────────────── v1.7.1 Installed MbedTLS_jll ───────────────── v2.28.6+2 Installed CompositionsBase ──────────── v0.1.2 Installed MacroTools ────────────────── v0.5.16 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed UnPack ────────────────────── v1.0.2 Installed Xorg_libXcursor_jll ───────── v1.2.4+0 Installed GeoFormatTypes ────────────── v0.4.4 Installed SparseInverseSubset ───────── v0.1.2 Installed InverseFunctions ──────────── v0.1.17 Installed Libuuid_jll ───────────────── v2.41.0+0 Installed SimpleTraits ──────────────── v0.9.4 Installed ColorBrewer ───────────────── v0.4.1 Installed YAML ──────────────────────── v0.4.13 Installed FASTX ─────────────────────── v2.1.7 Installed DifferentiationInterface ──── v0.6.52 Installed DocStringExtensions ───────── v0.9.4 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed Wayland_protocols_jll ─────── v1.36.0+0 Installed Adapt ─────────────────────── v4.3.0 Installed GPUArraysCore ─────────────── v0.1.6 Installed Transducers ───────────────── v0.4.84 Installed BioStructures ─────────────── v4.4.2 Installed StableRNGs ────────────────── v1.0.2 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed libass_jll ────────────────── v0.15.2+0 Installed Pixman_jll ────────────────── v0.44.2+0 Installed libinchi_jll ──────────────── v1.6.0+0 Installed Rmath ─────────────────────── v0.8.0 Installed XML2_jll ──────────────────── v2.13.6+1 Installed IntegerMathUtils ──────────── v0.1.2 Installed ImageBase ─────────────────── v0.1.7 Installed IntervalSets ──────────────── v0.7.11 Installed Gettext_jll ───────────────── v0.21.0+0 Installed Wayland_jll ───────────────── v1.21.0+2 Installed IterTools ─────────────────── v1.10.0 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed BitFlags ──────────────────── v0.1.9 Installed GLFW ──────────────────────── v3.4.4 Installed Cairo ─────────────────────── v1.1.1 Installed IndirectArrays ────────────── v1.0.0 Installed FFMPEG_jll ────────────────── v7.1.0+0 Installed MakieCore ─────────────────── v0.7.3 Installed Tables ────────────────────── v1.12.0 Installed GeometryBasics ────────────── v0.4.11 Installed Xorg_xkeyboard_config_jll ─── v2.44.0+0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed DataAPI ───────────────────── v1.16.0 Installed Dictionaries ──────────────── v0.4.5 Installed FixedPointNumbers ─────────── v0.8.5 Installed Xorg_libXrandr_jll ────────── v1.5.5+0 Installed ShaderAbstractions ────────── v0.4.1 Installed Primes ────────────────────── v0.5.7 Installed Optim ─────────────────────── v1.12.0 Installed Baselet ───────────────────── v0.1.1 Installed RecipesBase ───────────────── v1.3.4 Installed DelaunayTriangulation ─────── v0.8.12 Installed Xorg_libXfixes_jll ────────── v6.0.1+0 Installed LAME_jll ──────────────────── v3.100.2+0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed PrecompileTools ───────────── v1.3.2 Installed MIToS ─────────────────────── v3.0.6 Installed URIs ──────────────────────── v1.5.2 Installed StructArrays ──────────────── v0.6.18 Installed LaTeXStrings ──────────────── v1.4.0 Installed Glib_jll ──────────────────── v2.82.4+0 Installed libvorbis_jll ─────────────── v1.3.7+2 Installed libsixel_jll ──────────────── v1.10.5+0 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed LazyStack ─────────────────── v0.1.3 Installed FilePathsBase ─────────────── v0.9.24 Installed ForwardDiff ───────────────── v1.0.1 Installed FillArrays ────────────────── v1.13.0 Installed AxisAlgorithms ────────────── v1.1.0 Installed ImageAxes ─────────────────── v0.6.12 Installed QuadGK ────────────────────── v2.11.2 Installed CRlibm ────────────────────── v1.0.2 Installed SplittablesBase ───────────── v0.1.15 Installed CoordRefSystems ───────────── v0.7.4 Installed Requires ──────────────────── v1.3.1 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed Observables ───────────────── v0.5.5 Installed BioMakie ──────────────────── v0.4.1 Installed CircularArrays ────────────── v1.4.0 Installed coordgenlibs_jll ──────────── v3.0.2+0 Installed TransformsBase ────────────── v1.6.0 Installed GeoInterface ──────────────── v1.4.1 Installed Parameters ────────────────── v0.12.3 Installed LightXML ──────────────────── v0.9.1 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed Distributions ─────────────── v0.25.119 Installed libwebp_jll ───────────────── v1.5.0+0 Installed SimplePolynomials ─────────── v0.2.18 Installed SortingAlgorithms ─────────── v1.2.1 Installed Makie ─────────────────────── v0.20.8 Installing 74 artifacts Installed artifact LAME 292.5 KiB Installed artifact Bzip2 503.5 KiB Installed artifact libvorbis 271.0 KiB Installed artifact libass 372.4 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact libdecor 44.1 KiB Installed artifact Dbus 489.8 KiB Installed artifact Cairo 2.2 MiB Installed artifact Wayland 406.1 KiB Installed artifact xkbcommon 509.6 KiB Installed artifact Gettext 4.5 MiB Installed artifact libpng 328.5 KiB Installed artifact oneTBB 435.6 KiB Installed artifact x264 2.1 MiB Installed artifact Libiconv 1.9 MiB Installed artifact libsixel 177.3 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact Glib 7.6 MiB Installed artifact LERC 272.9 KiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Pango 1.1 MiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact Imath 182.8 KiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact Giflib 154.6 KiB Installed artifact libinchi 933.4 KiB Installed artifact XML2 2.5 MiB Installed artifact OpenEXR 1.9 MiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Installed artifact Graphite2 120.2 KiB Installed artifact Fontconfig 522.5 KiB Installed artifact Xorg_libXfixes 195.9 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Ogg 257.2 KiB Installed artifact Libmount 6.4 MiB Installed artifact Pixman 372.2 KiB Installed artifact Opus 908.1 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact libaom 6.4 MiB Installed artifact coordgenlibs 303.6 KiB Installed artifact libwebp 2.6 MiB Installed artifact Libuuid 3.5 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact FriBidi 78.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact EarCut 80.5 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact FreeType2 1.5 MiB Installed artifact Libtiff 3.2 MiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact FFMPEG 11.4 MiB Installed artifact GLFW 180.1 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact Wayland_protocols 129.5 KiB Installed artifact LZO 208.9 KiB Installed artifact FFTW 2.2 MiB Installed artifact JpegTurbo 1.6 MiB Installed artifact Libglvnd 833.5 KiB Installed artifact Libffi 34.1 KiB Installed artifact isoband 25.7 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact Zstd 646.0 KiB Installed artifact x265 1.4 MiB Installed artifact LLVMExtra 3.1 MiB Installed artifact CRlibm 169.5 KiB Installed artifact Expat 271.4 KiB Installed artifact XZ 1.5 MiB Installed artifact LLVMOpenMP 661.6 KiB Updating `~/.julia/environments/v1.13/Project.toml` [7de43156] + BioMakie v0.4.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs v1.5.0 [398f06c4] + AbstractLattices v0.3.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [15f4f7f2] + AutoHashEquals v2.2.0 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [0e736298] + Bessels v0.2.8 [00701ae9] + BioAlignments v3.1.0 [47718e42] + BioGenerics v0.1.5 [7de43156] + BioMakie v0.4.1 [7e6ae17a] + BioSequences v3.4.1 [de9282ab] + BioStructures v4.4.2 [3c28c6f8] + BioSymbols v5.2.0 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [96374032] + CRlibm v1.0.2 [159f3aea] + Cairo v1.1.1 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [7a955b69] + CircularArrays v1.4.0 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.29.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [03fe91ce] + Colorfy v0.1.6 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [d38c429a] + Contour v0.6.3 ⌅ [b46f11dc] + CoordRefSystems v0.7.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [244e2a9f] + DefineSingletons v0.1.2 ⌅ [927a84f5] + DelaunayTriangulation v0.8.12 [8bb1440f] + DelimitedFiles v1.9.1 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.52 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.5 [c2308a5c] + FASTX v2.1.7 [7a1cc6ca] + FFTW v1.8.1 [a0c94c4b] + FastaIO v1.1.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.0.1 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.6 [f7f18e0c] + GLFW v3.4.4 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v1.36.0+0 ⌅ [02c8fc9c] + XML2_jll v2.13.6+1 [ffd25f8a] + XZ_jll v5.8.1+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [f6050b86] + coordgenlibs_jll v3.0.2+0 [9a68df92] + isoband_jll v0.2.3+0 [a4ae2306] + libaom_jll v3.11.0+0 [0ac62f75] + libass_jll v0.15.2+0 [1183f4f0] + libdecor_jll v0.2.2+0 [f638f0a6] + libfdk_aac_jll v2.0.3+0 [172afb32] + libinchi_jll v1.6.0+0 [b53b4c65] + libpng_jll v1.6.47+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.7+2 [c5f90fcd] + libwebp_jll v1.5.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.4.1+2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 51.64s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 2380.5 ms ✓ Combinatorics 829.1 ms ✓ RangeArrays 1073.5 ms ✓ StringViews 1177.2 ms ✓ AbstractFFTs 872.4 ms ✓ LaTeXStrings 1161.5 ms ✓ PositiveFactorizations 839.2 ms ✓ IndirectArrays 809.0 ms ✓ PolygonOps 735.6 ms ✓ IteratorInterfaceExtensions 3982.6 ms ✓ ModernGL 1016.1 ms ✓ TensorCore 960.5 ms ✓ GeoFormatTypes 952.7 ms ✓ StatsAPI 720.3 ms ✓ AbstractLattices 1479.2 ms ✓ ADTypes 875.3 ms ✓ Contour 1638.9 ms ✓ InitialValues 823.5 ms ✓ CEnum 1691.9 ms ✓ OffsetArrays 895.5 ms ✓ TriplotBase 2459.6 ms ✓ Format 772.3 ms ✓ UnPack 2152.6 ms ✓ FillArrays 908.5 ms ✓ IntegerMathUtils 2763.4 ms ✓ Bessels 1048.2 ms ✓ InverseFunctions 1219.2 ms ✓ Statistics 884.9 ms ✓ ArgCheck 1148.8 ms ✓ IterTools 4434.9 ms ✓ MacroTools 1396.6 ms ✓ Grisu 1339.2 ms ✓ OrderedCollections 1086.5 ms ✓ Observables 1030.0 ms ✓ AutoHashEquals 1231.0 ms ✓ Requires 754.9 ms ✓ DataValueInterfaces 843.8 ms ✓ EnumX 935.0 ms ✓ RealDot 1087.1 ms ✓ StableRNGs 761.3 ms ✓ Reexport 1148.7 ms ✓ DocStringExtensions 1125.2 ms ✓ AbstractTrees 805.4 ms ✓ Twiddle 2278.4 ms ✓ IrrationalConstants 1079.5 ms ✓ IntervalSets 1230.9 ms ✓ URIs 960.6 ms ✓ RoundingEmulator 786.1 ms ✓ SimpleBufferStream 876.8 ms ✓ CompositionsBase 997.5 ms ✓ Extents 814.1 ms ✓ PtrArrays 1238.0 ms ✓ IntervalTrees 1265.3 ms ✓ TranscodingStreams 879.1 ms ✓ DefineSingletons 1128.6 ms ✓ NaNMath 960.8 ms ✓ LazyModules 1196.0 ms ✓ Multisets 1120.1 ms ✓ DelimitedFiles 1216.4 ms ✓ RingLists 869.6 ms ✓ InvertedIndices 1061.8 ms ✓ Inflate 1133.3 ms ✓ ConstructionBase 1180.3 ms ✓ Mods 820.5 ms ✓ DataAPI 776.6 ms ✓ PackageExtensionCompat 875.9 ms ✓ BitFlags 826.1 ms ✓ Indexing 907.8 ms ✓ StaticArraysCore 1000.5 ms ✓ TupleTools 968.7 ms ✓ MappedArrays 953.6 ms ✓ WeakKeyIdDicts 2288.8 ms ✓ Baselet 1273.4 ms ✓ GZip 1384.8 ms ✓ SuiteSparse 2210.4 ms ✓ ConcurrentUtilities 1957.9 ms ✓ ProgressMeter 1521.6 ms ✓ WoodburyMatrices 1770.0 ms ✓ StructTypes 34656.0 ms ✓ Unitful 1047.9 ms ✓ Scratch 1256.5 ms ✓ LoggingExtras 1301.9 ms ✓ Preferences 1281.7 ms ✓ Compat 3625.7 ms ✓ UnicodeFun 1293.2 ms ✓ Hyperscript 1909.7 ms ✓ ExceptionUnwrapping 5522.2 ms ✓ PkgVersion 1238.7 ms ✓ Permutations 4036.7 ms ✓ AbstractFFTs → AbstractFFTsTestExt 922.4 ms ✓ TableTraits 2051.0 ms ✓ DifferentiationInterface 1030.1 ms ✓ StackViews 1063.4 ms ✓ PaddedViews 840.8 ms ✓ CircularArrays 1604.1 ms ✓ FillArrays → FillArraysSparseArraysExt 1274.2 ms ✓ Primes 2044.1 ms ✓ InverseFunctions → InverseFunctionsTestExt 1068.7 ms ✓ InverseFunctions → InverseFunctionsDatesExt 959.8 ms ✓ SignedDistanceFields 3961.7 ms ✓ FixedPointNumbers 1700.4 ms ✓ Distances 1453.8 ms ✓ Statistics → SparseArraysExt 1078.5 ms ✓ FillArrays → FillArraysStatisticsExt 2073.0 ms ✓ CommonSubexpressions 6090.5 ms ✓ Lazy 5581.8 ms ✓ IRTools 3810.8 ms ✓ SimpleTraits 1021.8 ms ✓ Showoff 1076.3 ms ✓ Parameters 3481.5 ms ✓ MakieCore 842.6 ms ✓ Ratios 1043.2 ms ✓ Adapt 10307.4 ms ✓ FileIO 6042.2 ms ✓ DataValues 1196.2 ms ✓ Quaternions 1558.2 ms ✓ PikaParser 997.2 ms ✓ TransformsBase 1464.3 ms ✓ LogExpFunctions 942.2 ms ✓ IntervalSets → IntervalSetsRandomExt 962.3 ms ✓ IntervalSets → IntervalSetsStatisticsExt 967.4 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1170.1 ms ✓ AliasTables 1042.4 ms ✓ BioGenerics 1048.3 ms ✓ CodecZlib 935.3 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 926.8 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 949.2 ms ✓ ADTypes → ADTypesConstructionBaseExt 2165.8 ms ✓ GeoInterface 1087.1 ms ✓ Missings 1052.4 ms ✓ StridedViews 4128.6 ms ✓ OpenSSL 2143.0 ms ✓ Dictionaries 994.9 ms ✓ DiffResults 1093.8 ms ✓ FastaIO 1879.8 ms ✓ PDMats 1379.6 ms ✓ SparseInverseSubset 1774.2 ms ✓ AxisAlgorithms 2431.1 ms ✓ Unitful → ConstructionBaseUnitfulExt 2450.9 ms ✓ Unitful → InverseFunctionsUnitfulExt 1251.0 ms ✓ RelocatableFolders 1228.7 ms ✓ JLLWrappers 1022.3 ms ✓ PrecompileTools 977.7 ms ✓ Compat → CompatLinearAlgebraExt 1809.0 ms ✓ Tables 1412.8 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1124.1 ms ✓ MosaicViews 4732.5 ms ✓ ColorTypes 1418.8 ms ✓ Distances → DistancesSparseArraysExt 1028.4 ms ✓ Ratios → RatiosFixedPointNumbersExt 1356.8 ms ✓ Adapt → AdaptSparseArraysExt 1253.8 ms ✓ ArrayInterface 1240.8 ms ✓ GPUArraysCore 1009.9 ms ✓ OffsetArrays → OffsetArraysAdaptExt 944.4 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1810.1 ms ✓ AxisArrays 3197.1 ms ✓ Setfield 5168.0 ms ✓ Accessors 1319.2 ms ✓ TableTraitsUtils 889.3 ms ✓ StridedViews → StridedViewsPtrArraysExt 1237.3 ms ✓ Strided 1599.3 ms ✓ SplitApplyCombine 2222.1 ms ✓ FillArrays → FillArraysPDMatsExt 1714.8 ms ✓ coordgenlibs_jll 1593.1 ms ✓ libinchi_jll 1428.9 ms ✓ OpenBLASConsistentFPCSR_jll 1490.6 ms ✓ Graphite2_jll 1444.6 ms ✓ Libmount_jll 1305.3 ms ✓ EpollShim_jll 1543.0 ms ✓ LLVMOpenMP_jll 1418.9 ms ✓ Bzip2_jll 1547.3 ms ✓ Rmath_jll 1445.1 ms ✓ Xorg_libXau_jll 1694.7 ms ✓ libpng_jll 1678.0 ms ✓ libfdk_aac_jll 1727.6 ms ✓ Imath_jll 5816.0 ms ✓ IntelOpenMP_jll 1456.3 ms ✓ Giflib_jll 1441.1 ms ✓ LAME_jll 1458.2 ms ✓ LERC_jll 1426.8 ms ✓ EarCut_jll 1426.2 ms ✓ CRlibm_jll 1468.1 ms ✓ JpegTurbo_jll 1479.2 ms ✓ XZ_jll 1416.4 ms ✓ Ogg_jll 1442.9 ms ✓ oneTBB_jll 1455.8 ms ✓ Xorg_libXdmcp_jll 1443.8 ms ✓ x265_jll 1460.5 ms ✓ x264_jll 5925.5 ms ✓ LLVMExtra_jll 1472.8 ms ✓ libaom_jll 1485.7 ms ✓ MbedTLS_jll 1500.6 ms ✓ Zstd_jll 1473.5 ms ✓ Expat_jll 1504.0 ms ✓ LZO_jll 1475.8 ms ✓ Opus_jll 1323.0 ms ✓ Xorg_xtrans_jll 1493.3 ms ✓ Libiconv_jll 1499.2 ms ✓ Libffi_jll 1429.2 ms ✓ isoband_jll 1277.4 ms ✓ Wayland_protocols_jll 1496.0 ms ✓ FFTW_jll 1488.9 ms ✓ OpenSpecFun_jll 1448.6 ms ✓ FriBidi_jll 1435.6 ms ✓ Libuuid_jll 14084.3 ms ✓ StaticArrays 2949.9 ms ✓ RecipesBase 2724.9 ms ✓ BioSymbols 18065.8 ms ✓ SIMD 18039.9 ms ✓ Parsers 4521.2 ms ✓ DataStructures 2564.0 ms ✓ FilePathsBase 2843.3 ms ✓ ChainRulesCore 1812.8 ms ✓ StructArrays 6870.8 ms ✓ StableHashTraits 6611.9 ms ✓ QOI 3912.6 ms ✓ ColorVectorSpace 7258.7 ms ✓ Colors 1448.8 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 946.2 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 993.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 972.3 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 3914.8 ms ✓ SplittablesBase 2776.3 ms ✓ Accessors → LinearAlgebraExt 2232.1 ms ✓ Accessors → TestExt 2840.0 ms ✓ Accessors → IntervalSetsExt 2645.6 ms ✓ Accessors → UnitfulExt 1503.6 ms ✓ Pixman_jll 1713.7 ms ✓ FreeType2_jll 1851.6 ms ✓ Rmath 1702.9 ms ✓ OpenEXR_jll 1472.6 ms ✓ CRlibm 1740.7 ms ✓ libsixel_jll 1721.6 ms ✓ libvorbis_jll 8984.0 ms ✓ MKL_jll 1702.6 ms ✓ Xorg_libxcb_jll 22243.2 ms ✓ LLVM 2536.5 ms ✓ MbedTLS 1738.1 ms ✓ Libtiff_jll 1826.5 ms ✓ Dbus_jll 1415.1 ms ✓ StringEncodings 1701.4 ms ✓ XML2_jll 1444.2 ms ✓ Isoband 5568.8 ms ✓ SpecialFunctions 4529.8 ms ✓ ArnoldiMethod 1720.4 ms ✓ StaticArrays → StaticArraysStatisticsExt 1751.0 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1715.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1711.3 ms ✓ Adapt → AdaptStaticArraysExt 5855.2 ms ✓ Rotations 1859.1 ms ✓ Accessors → StaticArraysExt 36024.3 ms ✓ Polynomials 1525.7 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 10104.4 ms ✓ BioSequences 11847.3 ms ✓ BioStructures 21569.0 ms ✓ Automa 16310.0 ms ✓ JSON3 4382.2 ms ✓ JSON 2104.6 ms ✓ SortingAlgorithms 3261.0 ms ✓ QuadGK 3551.7 ms ✓ NamedArrays 2128.4 ms ✓ SimplePartitions 125012.3 ms ✓ TiffImages 1337.9 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3475.2 ms ✓ FilePathsBase → FilePathsBaseTestExt 1867.0 ms ✓ FilePaths 1551.7 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2768.3 ms ✓ ZygoteRules 1306.6 ms ✓ LazyStack 1072.1 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 1059.9 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1073.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 1097.7 ms ✓ Distances → DistancesChainRulesCoreExt 1529.7 ms ✓ TransmuteDims 3449.5 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 1046.0 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1795.9 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 1078.1 ms ✓ StructArrays → StructArraysAdaptExt 1545.6 ms ✓ StructArrays → StructArraysSparseArraysExt 1905.4 ms ✓ StructArrays → StructArraysStaticArraysExt 1056.0 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1268.9 ms ✓ Accessors → StructArraysExt 1510.7 ms ✓ Graphics 1523.7 ms ✓ Animations 32156.1 ms ✓ ImageCore 7567.4 ms ✓ ColorSchemes 1412.1 ms ✓ FiniteDiff 1948.5 ms ✓ BangBang 2185.9 ms ✓ FreeType 1817.1 ms ✓ Fontconfig_jll 6963.8 ms ✓ OpenEXR 8035.2 ms ✓ IntervalArithmetic 6837.1 ms ✓ FFTW 1705.0 ms ✓ Xorg_libX11_jll 10481.3 ms ✓ GPUArrays HTTP Waiting for background task / IO / timer. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1604] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. 158219.3 ms ✓ HTTP 2861.7 ms ✓ YAML 1445.2 ms ✓ LightXML 1757.1 ms ✓ Gettext_jll 1777.7 ms ✓ Wayland_jll 4466.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2681.5 ms ✓ HypergeometricFunctions 1456.5 ms ✓ DiffRules 1826.2 ms ✓ ColorVectorSpace → SpecialFunctionsExt 4348.7 ms ✓ NearestNeighbors 10831.2 ms ✓ Graphs 2368.6 ms ✓ Rotations → RotationsRecipesBaseExt 5849.5 ms ✓ Polynomials → PolynomialsMakieCoreExt 4055.6 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 4486.7 ms ✓ SimplePolynomials 3760.4 ms ✓ BioAlignments 1974.3 ms ✓ BioStructures → BioStructuresBioSequencesExt 22325.5 ms ✓ FASTX 3867.9 ms ✓ ColorBrewer 5420.0 ms ✓ StatsBase 3740.6 ms ✓ PairwiseListMatrices 4653.1 ms ✓ Interpolations 20695.3 ms ✓ TensorCast 11558.1 ms ✓ GeometryBasics 12707.7 ms ✓ ChainRules 4651.8 ms ✓ ImageBase 7267.7 ms ✓ PNGFiles 11585.6 ms ✓ Sixel 12259.2 ms ✓ JpegTurbo 2526.7 ms ✓ Colorfy 18089.9 ms ✓ PlotUtils 1450.6 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1696.2 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1138.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 2044.7 ms ✓ BangBang → BangBangStaticArraysExt 1474.9 ms ✓ BangBang → BangBangChainRulesCoreExt 1421.4 ms ✓ BangBang → BangBangStructArraysExt 1414.4 ms ✓ BangBang → BangBangTablesExt 3027.6 ms ✓ MicroCollections 1836.9 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 1394.1 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 3686.4 ms ✓ IntervalArithmetic → IntervalArithmeticRecipesBaseExt 4420.3 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 4429.3 ms ✓ Polynomials → PolynomialsFFTWExt 1650.0 ms ✓ Xorg_libXrender_jll 1715.4 ms ✓ Xorg_libXext_jll 1764.9 ms ✓ Xorg_libXfixes_jll 1740.3 ms ✓ Xorg_libxkbfile_jll 7930.8 ms ✓ FileIO → HTTPExt 1726.6 ms ✓ Glib_jll 3181.9 ms ✓ StatsFuns 9338.1 ms ✓ ForwardDiff 1391.6 ms ✓ IntervalArithmetic → IntervalArithmeticDiffRulesExt 4468.5 ms ✓ LinearAlgebraX 2180.3 ms ✓ BioStructures → BioStructuresBioAlignmentsExt 2498.6 ms ✓ FASTX → BioSequencesExt 13822.9 ms ✓ MIToS 3960.9 ms ✓ Interpolations → InterpolationsUnitfulExt 11615.2 ms ✓ GridLayoutBase 3270.7 ms ✓ Packing 3740.7 ms ✓ ShaderAbstractions 8780.1 ms ✓ MeshIO 5093.0 ms ✓ FreeTypeAbstraction 2083.5 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 6928.6 ms ✓ ImageAxes 8847.8 ms ✓ ImageShow 3443.4 ms ✓ Colorfy → ColorfyUnitfulExt 7923.9 ms ✓ Transducers 9932.6 ms ✓ ExactPredicates 1635.2 ms ✓ Xorg_libXinerama_jll 1639.1 ms ✓ Xorg_libXrandr_jll 1671.5 ms ✓ Libglvnd_jll 1633.4 ms ✓ Xorg_libXcursor_jll 1623.9 ms ✓ Xorg_libXi_jll 1571.6 ms ✓ Xorg_xkbcomp_jll 1725.0 ms ✓ Cairo_jll 1297.6 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3812.8 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 10280.0 ms ✓ Distributions 4172.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1750.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 1992.8 ms ✓ IntervalArithmetic → IntervalArithmeticForwardDiffExt ✗ Zygote 24498.2 ms ✓ MathTeXEngine 4688.4 ms ✓ ImageMetadata 2413.0 ms ✓ Transducers → TransducersAdaptExt 1828.4 ms ✓ libwebp_jll 1473.6 ms ✓ Xorg_xkeyboard_config_jll 1752.4 ms ✓ HarfBuzz_jll 3845.4 ms ✓ Distributions → DistributionsTestExt 3998.0 ms ✓ Distributions → DistributionsChainRulesCoreExt 3576.0 ms ✓ SimpleRandom 4163.3 ms ✓ Colorfy → ColorfyDistributionsExt 4375.3 ms ✓ NLSolversBase ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt ✗ CoordRefSystems 8333.3 ms ✓ Netpbm 8751.9 ms ✓ WebP 1584.5 ms ✓ xkbcommon_jll 1647.2 ms ✓ libass_jll 1677.8 ms ✓ Pango_jll 5139.2 ms ✓ KernelDensity 6290.2 ms ✓ LineSearches ✗ Meshes 5220.8 ms ✓ ImageIO 1755.9 ms ✓ FFMPEG_jll 1878.6 ms ✓ libdecor_jll 2687.2 ms ✓ Cairo 10019.8 ms ✓ Optim 1698.0 ms ✓ GLFW_jll 22370.2 ms ✓ MolecularGraph 6901.4 ms ✓ SimpleGraphs 2733.3 ms ✓ GLFW 12778.5 ms ✓ DelaunayTriangulation 175847.7 ms ✓ Makie ✗ Meshes → MeshesMakieExt ✗ GLMakie ✗ BioMakie 405 dependencies successfully precompiled in 2166 seconds. 40 already precompiled. 5 dependencies had output during precompilation: ┌ HTTP │ ┌ Info: Ignoring an error that occurred during the precompilation workload │ │ exception = │ │ HTTP.ConnectError for url = `https://localhost:57814`: TimeoutException: try_with_timeout timed out after 30.0 seconds │ │ Stacktrace: │ │ [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:88 │ │ [2] connections │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:60 [inlined] │ │ [3] (::Base.var"#47#48"{Base.var"#49#50"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ Base ./error.jl:311 │ │ [4] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.RetryRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:75 │ │ [5] manageretries │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:30 [inlined] │ │ [6] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.CookieRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:42 │ │ [7] managecookies │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:19 [inlined] │ │ [8] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Nothing, decompress::Nothing, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.HeadersRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:71 │ │ [9] defaultheaders │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:14 [inlined] │ │ [10] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.RedirectRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:25 │ │ [11] redirects │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:14 [inlined] │ │ [12] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Nothing, body::Vector{UInt8}; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{}) │ │ @ HTTP.MessageRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:35 │ │ [13] makerequest │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:24 [inlined] │ │ [14] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing; headers::Nothing, body::Vector{UInt8}, query::Nothing, kw::@Kwargs{}) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:457 │ │ [15] request(stack::Function, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:455 │ │ [16] #request#21 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:315 [inlined] │ │ [17] request (repeats 2 times) │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:313 [inlined] │ │ [18] get │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:518 [inlined] │ │ [19] #51 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:36 [inlined] │ │ [20] withenv(::HTTP.var"#51#52"{String}, ::Pair{String, Union{Nothing, String}}, ::Vararg{Pair{String, Union{Nothing, String}}}) │ │ @ Base ./env.jl:265 │ │ [21] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:35 [inlined] │ │ [22] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] │ │ [23] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:34 [inlined] │ │ [24] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] │ │ [25] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:4 │ │ [26] include(mapexpr::Function, mod::Module, _path::String) │ │ @ Base ./Base.jl:304 │ │ [27] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:643 │ │ [28] include(mod::Module, _path::String) │ │ @ Base ./Base.jl:303 │ │ [29] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ │ @ Base ./loading.jl:2978 │ │ [30] top-level scope │ │ @ stdin:5 │ │ [31] eval(m::Module, e::Any) │ │ @ Core ./boot.jl:489 │ │ [32] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ │ @ Base ./loading.jl:2824 │ │ [33] include_string │ │ @ ./loading.jl:2834 [inlined] │ │ [34] exec_options(opts::Base.JLOptions) │ │ @ Base ./client.jl:329 │ │ [35] _start() │ └ @ Base ./client.jl:563 │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1604] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. └ ┌ StableRNGs │ WARNING: Constructor for type "Sampler" was extended in `StableRNGs` without explicit qualification or import. │ NOTE: Assumed "Sampler" refers to `Random.Sampler`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Sampler end`. │ Hint: To silence the warning, qualify `Sampler` as `Random.Sampler` in the method signature or explicitly `import Random: Sampler`. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ┌ Makie │ ┌ Warning: `stable_hash(x; version < 4)` is not supported in Julia 1.11 or higher. Calls should not error, but *may* silently produce different hashes. `stable_hash` is intended to be used for caching, so this likely will simply reduce the number of cache hits. Upgrade to using `stable_hash(x; version=4) to avoid this warning. │ └ @ StableHashTraits ~/.julia/packages/StableHashTraits/FV3wr/src/main_interface.jl:55 └ ┌ IRTools │ WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Inner. └ ERROR: LoadError: The following 1 direct dependency failed to precompile: BioMakie Failed to precompile BioMakie [7de43156-b762-4475-b39f-ba1e1e59ee2f] to "/home/pkgeval/.julia/compiled/v1.13/BioMakie/jl_TO0G84" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool; reuse::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241 [6] empty_screen @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined] [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329 [8] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [14] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79 [15] include(mod::Module, _path::String) @ Base ./Base.jl:303 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [20] include_string @ ./loading.jl:2834 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_EpykUb" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2039.43s ################################################################################ # Loading # Loading BioMakie... Precompiling packages... ✗ Zygote ✗ GLMakie ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt ✗ CoordRefSystems ✗ Meshes ✗ Meshes → MeshesMakieExt Info Given BioMakie was explicitly requested, output will be shown live  ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace:  [1] _ErrorCallbackWrapper(code::Int32, description::Cstring)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46  [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580  [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404  [4] Window  @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined]  [5] empty_screen(debugging::Bool; reuse::Bool)  @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241  [6] empty_screen  @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined]  [7] singleton_screen(debugging::Bool)  @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329  [8] macro expansion  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined]  [9] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [10] macro expansion  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined]  [11] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [12] top-level scope  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [14] top-level scope  @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2978  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [20] include_string  @ ./loading.jl:2834 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [22] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_yuBE31" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3265  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2651  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1279  [8] #invokelatest_gr#234  @ ./reflection.jl:1287 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1281 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3836  [11] maybe_cachefile_lock  @ ./loading.jl:3833 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2637  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2465  [14] macro expansion  @ ./loading.jl:2393 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2358  [17] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2334  [18] top-level scope  @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [24] include_string  @ ./loading.jl:2834 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [26] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin:5 ✗ BioMakie 0 dependencies successfully precompiled in 304 seconds. 445 already precompiled. ERROR: The following 1 direct dependency failed to precompile: BioMakie Failed to precompile BioMakie [7de43156-b762-4475-b39f-ba1e1e59ee2f] to "/home/pkgeval/.julia/compiled/v1.13/BioMakie/jl_qapkto" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool; reuse::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241 [6] empty_screen @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined] [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329 [8] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [14] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79 [15] include(mod::Module, _path::String) @ Base ./Base.jl:303 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [20] include_string @ ./loading.jl:2834 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_yuBE31" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin: Loading failed after 306.0s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using BioMakie'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 2555.66s: package fails to precompile