Package evaluation of ApproxManifoldProducts on Julia 1.13.0-DEV.449 (8d6b63c3a6*) started at 2025-04-29T08:39:14.117 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 8.2s ################################################################################ # Installation # Installing ApproxManifoldProducts... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [9bbbb610] + ApproxManifoldProducts v0.9.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [9bbbb610] + ApproxManifoldProducts v0.9.1 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [d360d2e6] + ChainRulesCore v1.25.1 [3da002f7] + ColorTypes v0.12.1 [5ae59095] + Colors v0.13.0 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [150eb455] + CoordinateTransformations v0.6.4 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.52 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions 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libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.0s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompilation completed after 521.46s ################################################################################ # Testing # Testing ApproxManifoldProducts Status `/tmp/jl_xvtldO/Project.toml` [9bbbb610] ApproxManifoldProducts v0.9.1 [fbb218c0] BSON v0.3.9 [5ae59095] Colors v0.13.0 [150eb455] CoordinateTransformations v0.6.4 [a93c6f00] DataFrames v1.7.0 [31c24e10] Distributions v0.25.119 [ffbed154] DocStringExtensions v0.9.4 [0f8b85d8] JSON3 v1.14.2 [2472808a] KernelDensityEstimate v0.5.13 [1cead3c2] Manifolds v0.10.17 [3362f125] ManifoldsBase v1.0.3 [2774e3e8] NLsolve v4.5.1 [429524aa] Optim v1.12.0 [731186ca] RecursiveArrayTools v3.33.0 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [6038ab10] Rotations v1.7.1 [90137ffa] StaticArrays v1.9.13 [10745b16] Statistics v1.11.1 [02d47bb6] TensorCast v0.4.8 [9b8138ad] TransformUtils v0.2.19 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 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v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.10.1+0 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.65.0+0 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... Precompiling packages... 4737.5 ms ✓ Distributions → DistributionsTestExt 1 dependency successfully precompiled in 6 seconds. 49 already precompiled. Precompiling packages... 11984.4 ms ✓ Manifolds → ManifoldsTestExt 1 dependency successfully precompiled in 13 seconds. 83 already precompiled. Test Summary: | Pass Total Time test circular difftheta... | 18 18 1.7s Test Summary: | Pass Total Time test circular manifold BallTree construction small positive... | 16 16 8.9s Test Summary: | Pass Total Time test circular manifold BallTree construction small negative... | 16 16 0.2s Test Summary: | Pass Total Time test circular manifold BallTree construction around 0rad... | 16 16 0.0s Test Summary: | Pass Total Time test circular manifold BallTree construction around π wrap point... | 7 7 0.0s Test Summary: | Pass Total Time basic linear 1D find mu and Lambdas Gaussian product test... | 2 2 26.3s Test Summary: | Pass Total Time test 1D with 3 components on basic Euclidean line... | 2 2 0.0s Test Summary: | Pass Total Time Test SO2 wrap around minimization Gaussian means... | 9 9 12.2s Test Summary: | Pass Total Time basic linear 2D Rotation find mu and Lambdas Gaussian product test... | 8 8 1.1s ┌ Warning: SpecialEuclidean will move to LieGroups.jl and be renamed to SpecialEuclideanGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: TranslationGroup will move to LieGroups.jl. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: SpecialOrthogonal will move to LieGroups.jl and be renamed to SpecialOrthogonalGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: SemidirectProductGroup will move to LieGroups.jl and be renamed to LeftSemidirectProductLieGroup. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, HybridTangentRepresentation}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Total Time test Manifolds.jl conventions | 10 10 12.9s ┌ Warning: GroupManifold functionality will move to its own package `LieGroups.jl`. │ │ `Identity` will move and keep its name. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Error: Missing SO(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:54 Test Summary: | Pass Total Time SO(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 3 3 4.7s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function exp_lie! will move to LieGroups.jl and be renamed to exp!. │ caller = ip:0x0 └ @ Core :-1 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: TODO find Manifolds operation equivalent to Mahony 2024, perhaps `vector_transport_along`? └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:171 Test Summary: | Pass Total Time SO(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 10 10 23.0s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Error: Missing SE(2) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:213 Test Summary: | Pass Total Time SE(2) Vector transport (w curvature) via Jacobians and Lie adjoints | 2 2 9.7s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Error: Missing SE(3) vector transport numerical verify tests └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testLieFundamentals.jl:247 Test Summary: | Pass Total Time SE(3) Vector transport (w curvature) via Jacobians and Lie adjoints | 1 1 8.0s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Total Time (Lie Group) on-manifold Gaussian product SO(3), [Ge, van Goor, Mahony, 2024] | 4 4 1m30.5s ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, LeftInvariantRepresentation}, q::ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, LeftInvariantRepresentation}, q::ArrayPartition{Float64, Tuple{Vector{Float64}, Matrix{Float64}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie! will move to LieGroups.jl and be renamed to log!. │ caller = log_lie! at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Total Time test getManifoldPartial on Euclidean(N) | 6 6 11.1s Test Summary: | Pass Total Time test getManifoldPartial on Circle() | 4 4 1.8s Test Summary: | Pass Total Time test getManifoldPartial on Rotations(2) | 4 4 1.6s Test Summary: | Pass Total Time test getManifoldPartial on SpecialEuclidean(2; vectors=HybridTangentRepresentation()) | 20 20 36.0s ┌ Error: Must fix Sphere(2) partial test └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/testManifoldPartial.jl:108 Test Summary: | Broken Total Time Reminder, getManifoldPartial on Sphere(2) [TBD] | 1 1 0.1s Test Summary: | Pass Broken Total Time test getPoints under partial with representation | 2 1 3 20.2s Test Summary: | Pass Broken Total Time test marginal of marginal (partial) helper | 75 1 76 7.2s Test Summary: | Pass Total Time test replace overloads full and partial/marginal | 49 49 6.8s Test Summary: | Pass Broken Total Time multiply big and small | 5 2 7 19.8s Test Summary: | Pass Total Time Basic 3D multiply and cross dimension covariance test... | 7 7 15.7s Test Summary: | Pass Total Time test calcProductGaussians | 2 2 10.7s Test Summary: | Pass Total Time comparison test with basic product | 12 12 13.8s Test Summary: | Pass Total Time test dim=2 product with one partial/marginal | 103 103 9.8s Test Summary: | Pass Total Time test dim=2 product with one full and two similar marginals | 103 103 2.0s Test Summary: | Pass Total Time test dim=2 product with one full and two different marginals | 103 103 3.0s Test Summary: | Pass Total Time product of only one marginal per each of two dimensions | 103 103 7.6s Test Summary: | Pass Total Time test dim=2 product of only marginals, two per dimension, 4 factors total | 101 101 2.8s Test Summary: | Pass Total Time test dim=3 product with one full and two different marginals | 153 153 30.1s Test Summary: | Pass Total Time test dim=3 product with one full and two different marginals (marginal first in product) | 153 153 1.7s Test Summary: | Pass Total Time test dim=3 product with two different marginals and one open dimension | 104 104 7.0s Test Summary: | Pass Total Time Test mmd distance between Euclidean beliefs | 1 1 6.9s Test Summary: | Pass Total Time Test mmd distance between 2D Euclidean beliefs | 1 1 1.4s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Broken Total Time partial product with a SpecialEuclidean(2; vectors=HybridTangentRepresentation()) | 403 400 803 6m37.3s ManifoldKernelDensity{ M = GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{3}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{3}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{3}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{3}}}}}, HybridTangentRepresentation}, B = BallTreeDensity, L = Nothing, P = ArrayPartition{Float64, Tuple{SizedVector{3, Float64, Vector{Float64}}, Matrix{Float64}}} }( Npts: 50 dims: 6 prtl: nothing bws: [0.2788, 0.3517, 0.1347, 0.0217, 0.0651, 0.0708] ipc: [1.0, 1.0, 1.0, 1.0, 1.0, 1.0] mean: ---- ) Test Summary: | Pass Total Time Test isapprox function on basic SpecialEuclidean(3; vectors=HybridTangentRepresentation()) | 10 10 13.2s Test Summary: | Pass Total Time test symmetry of Manifolds.distance | 4 4 10.1s Test Summary: | Pass Total Time test updating of beliefs | 3 3 2.9s Test Summary: | Pass Broken Total Time Test basic MKD statistics | 5 1 6 11.4s ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 _ax_ERR = (log_lie(SpecialOrthogonal(2), r_R_ax_' * r_R_ax))[1, 2] = -0.021064251937364088 testval = isapprox(0, _ax_ERR; atol = 8 / length(ax_CC)) = true ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}, q::Matrix{Float64}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function log_lie will move to LieGroups.jl and be renamed to log. │ caller = log_lie(G::SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}, q::Matrix{Float64}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Total Time test ManellicTree construction | 4 4 48.4s Test Summary: | Pass Total Time ManellicTree construction 1D | 362 362 1m07.8s Test Summary: | Pass Total Time ManellicTree 1D basic construction and evaluations | 106 106 2m07.8s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv(G::GroupManifold{ℝ, ProductManifold{ℝ, Tuple{TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, Manifolds.SemidirectProductOperation{RotationAction{LeftAction, TranslationGroup{ManifoldsBase.TypeParameter{Tuple{2}}, ℝ}, SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}}}, HybridTangentRepresentation}, p::ArrayPartition{Float64, Tuple{SizedVector{2, Float64, Vector{Float64}}, Matrix{Float64}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 Test Summary: | Pass Broken Total Time Test evaluate MvNormalKernel | 9 2 11 12.6s ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::TranslationGroup{ManifoldsBase.TypeParameter{Tuple{1}}, ℝ}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ┌ Warning: The function identity_element will move to LieGroups.jl. │ caller = identity_element(G::SpecialOrthogonal{ManifoldsBase.TypeParameter{Tuple{2}}}) at nested_trait.jl:306 └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 y_pdf = 0.6349363593424094 ┌ Warning: soft test failure for approx function vs. true Normal density function evaluation └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testManifoldTreeConstr.jl:443 Test Summary: | Pass Broken Total Time Basic ManellicTree manifolds construction and evaluations | 2 1 3 5m07.2s ┌ Error: expectedLogL for different number of test points not working yet. └ @ Main ~/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEvaluation.jl:35 AMP.entropy(mtree) = Inf Test Summary: | Pass Total Time Manellic basic evaluation test 1D | 2 2 4.6s Test Summary: | Pass Total Time Manellic tree bandwidth evaluation | 4 4 5.9s Test Summary: | Pass Total Time Manellic tree kernel bandwidth 1D LOO evaluation/entropy checks | 3 3 2.2s best_cov = Optim.minimizer(res) = 0.5900110782354975 Test Summary: | Pass Total Time Manellic tree bandwidth optimization 1D section search | 4 4 34.9s best_cov = 0.6707366347840222 Test Summary: | Pass Broken Total Time Manellic tree all up construction with bandwith optimization | 1 1 2 11.8s 7.999673 seconds (12.18 M allocations: 468.384 MiB, 1.58% gc time, 72.77% compilation time) best_cov = abs.(Optim.minimizer(res)) = [0.6156812426054105, 0.5839276646162489] Test Summary: | Pass Total Time Multidimensional LOOCV bandwidth optimization, TranslationGroup(2) | 3 3 28.4s ┌ Warning: The function inv will move to LieGroups.jl. │ caller = inv at nested_trait.jl:306 [inlined] └ @ Core ~/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 173 running 1 of 2 signal (10): User defined signal 1 unknown function (ip: 0x7de3baf18f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) _ZNK4llvm6object7ELFFileINS0_7ELFTypeILNS_10endiannessE1ELb1EEEE8sectionsEv at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZNK4llvm6object7ELFFileINS0_7ELFTypeILNS_10endiannessE1ELb1EEEE10getSectionEj at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZNK4llvm6object7ELFFileINS0_7ELFTypeILNS_10endiannessE1ELb1EEEE8getEntryINS0_12Elf_Sym_ImplIS4_EEEENS_8ExpectedIPKT_EEjj at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZNK4llvm6object13ELFObjectFileINS0_7ELFTypeILNS_10endiannessE1ELb1EEEE16getSymbolSectionENS0_11DataRefImplE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) _ZNK4llvm6object10SectionRef14containsSymbolENS0_9SymbolRefE at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) get_function_name_and_base at /source/src/debuginfo.cpp:736 [inlined] jl_dylib_DI_for_fptr at /source/src/debuginfo.cpp:1137 jl_getDylibFunctionInfo at /source/src/debuginfo.cpp:1169 [inlined] jl_getFunctionInfo_impl at /source/src/debuginfo.cpp:1264 ijl_lookup_code_address at /source/src/stackwalk.c:612 lookup at ./stacktraces.jl:110 firstcaller at ./deprecated.jl:295 [inlined] firstcaller at ./deprecated.jl:290 [inlined] macro expansion at ./deprecated.jl:270 [inlined] macro expansion at ./logging/logging.jl:401 [inlined] _depwarn at ./deprecated.jl:265 jfptr__depwarn_20288.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 apply_gr at ./reflection.jl:1278 _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] jl_f_invokelatest at /source/src/builtins.c:875 #invokelatest_gr#234 at ./reflection.jl:1285 [inlined] invokelatest_gr at ./reflection.jl:1281 [inlined] #depwarn#954 at ./deprecated.jl:256 [inlined] depwarn at ./deprecated.jl:251 [inlined] _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/nD417/src/groups/GroupManifold.jl:4 [inlined] _lie_groups_depwarn_move at /home/pkgeval/.julia/packages/Manifolds/nD417/src/groups/GroupManifold.jl:4 [inlined] inv at /home/pkgeval/.julia/packages/Manifolds/nD417/src/groups/group.jl:618 inv at /home/pkgeval/.julia/packages/ManifoldsBase/AinsU/src/nested_trait.jl:306 [inlined] distanceMalahanobisCoordinates at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:99 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 distanceMalahanobisSq at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:113 [inlined] ker at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:137 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/KernelEval.jl:50 unknown function (ip: 0x7de387bb00ad) at (unknown file) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 evaluate at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:682 expectedLogL at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:741 entropy at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/src/services/ManellicTree.jl:759 cost4 at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:227 unknown function (ip: 0x7de387ba4522) at (unknown file) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 value at /home/pkgeval/.julia/packages/NLSolversBase/totsP/src/interface.jl:19 initial_state at /home/pkgeval/.julia/packages/Optim/8dE7C/src/multivariate/solvers/zeroth_order/nelder_mead.jl:175 optimize at /home/pkgeval/.julia/packages/Optim/8dE7C/src/multivariate/optimize/optimize.jl:43 [inlined] #optimize#67 at /home/pkgeval/.julia/packages/Optim/8dE7C/src/multivariate/optimize/interface.jl:274 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/8dE7C/src/multivariate/optimize/interface.jl:264 [inlined] optimize at /home/pkgeval/.julia/packages/Optim/8dE7C/src/multivariate/optimize/interface.jl:264 unknown function (ip: 0x7de387c5a9ed) at (unknown file) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 macro expansion at ./timing.jl:645 [inlined] macro expansion at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:231 [inlined] macro expansion at /source/usr/share/julia/stdlib/v1.13/Test/src/Test.jl:1835 [inlined] top-level scope at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:220 _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_invoke at /source/src/gf.c:3486 jl_toplevel_eval_flex at /source/src/toplevel.c:1027 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 include_string at ./loading.jl:2824 _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 _include at ./loading.jl:2884 include at ./Base.jl:304 IncludeInto at ./Base.jl:305 jfptr_IncludeInto_74788.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:707 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1038 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 include_string at ./loading.jl:2824 _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 _include at ./loading.jl:2884 include at ./Base.jl:304 IncludeInto at ./Base.jl:305 jfptr_IncludeInto_74788.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] do_call at /source/src/interpreter.c:124 eval_value at /source/src/interpreter.c:242 eval_stmt_value at /source/src/interpreter.c:193 [inlined] eval_body at /source/src/interpreter.c:707 jl_interpret_toplevel_thunk at /source/src/interpreter.c:898 jl_toplevel_eval_flex at /source/src/toplevel.c:1038 jl_toplevel_eval_flex at /source/src/toplevel.c:978 ijl_toplevel_eval at /source/src/toplevel.c:1050 ijl_toplevel_eval_in at /source/src/toplevel.c:1095 eval at ./boot.jl:489 exec_options at ./client.jl:297 _start at ./client.jl:563 jfptr__start_20407.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] true_main at /source/src/jlapi.c:950 jl_repl_entrypoint at /source/src/jlapi.c:1110 main at /source/cli/loader_exe.c:58 unknown function (ip: 0x7de3baeba249) at /lib/x86_64-linux-gnu/libc.so.6 __libc_start_main at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) unknown function (ip: 0x4010b8) at /workspace/srcdir/glibc-2.17/csu/../sysdeps/x86_64/start.S unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x6ffc2f8c2f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x00006ffc24d90f10 Total snapshots: 233. Utilization: 0% ╎233 @Base/task.jl:1150 wait_forever() 232╎ 233 @Base/task.jl:1216 wait() Thread 2 (default) Task 0x00006ffc257fc100 Total snapshots: 233. Utilization: 0% ╎233 @Base/task.jl:1150 wait_forever() 232╎ 233 @Base/task.jl:1216 wait() [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 unknown function (ip: 0x6ffc2f8c2f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [173] signal 15: Terminated in expression starting at /home/pkgeval/.julia/packages/ApproxManifoldProducts/CjeCO/test/manellic/testTreeEntropyBandwidth.jl:217 unknown function (ip: 0x7de3baf18f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 wait_forever at ./task.jl:1150 jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) _ZNK4llvm6object7ELFFileINS0_7ELFTypeILNS_10endiannessE1ELb1EEEE8sectionsEv at /opt/julia/bin/../lib/julia/libLLVM.so.19.1jl (unknown line) unknown function (ip: 0x42f1947) at (unknown file) unknown function (ip: 0x26) at (unknown file) unknown function (ip: (nil)) at (unknown file) Allocations: 410733332 (Pool: 410729461; Big: 3871); GC: 121 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30242.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3479 [inlined] ijl_apply_generic at /source/src/gf.c:3679 jl_apply at /source/src/julia.h:2348 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 23443688 (Pool: 23443125; Big: 563); GC: 23 PkgEval terminated after 2728.73s: test duration exceeded the time limit