Package evaluation to load OpticSim on Julia 1.14.0-DEV.87 (8bcaa34afa*) started at 2025-11-15T15:15:10.293


################################################################################
# Set-up
#


Set-up completed after 0.14s


################################################################################
# Installation
#

Installing OpticSim...
   Resolving package versions...
    Updating `~/.julia/environments/v1.14/Project.toml`
  [24114763] + OpticSim v0.7.1
    Updating `~/.julia/environments/v1.14/Manifest.toml`
  [36dd7d7d] + AGFFileReader v1.1.3
  [66dad0bd] + AliasTables v1.1.3
  [6e4b80f9] + BenchmarkTools v1.6.3
  [d1d4a3ce] + BitFlags v0.1.9
  [96374032] + CRlibm v1.0.2
⌅ [da1fd8a2] + CodeTracking v1.3.9
  [523fee87] + CodecBzip2 v0.8.5
  [944b1d66] + CodecZlib v0.7.8
  [3da002f7] + ColorTypes v0.12.1
  [bbf7d656] + CommonSubexpressions v0.3.1
  [34da2185] + Compat v4.18.1
  [f0e56b4a] + ConcurrentUtilities v2.5.0
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.8.1
  [864edb3b] + DataStructures v0.19.3
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [163ba53b] + DiffResults v1.1.0
  [b552c78f] + DiffRules v1.15.1
  [31c24e10] + Distributions v0.25.122
  [ffbed154] + DocStringExtensions v0.9.5
  [4e289a0a] + EnumX v1.0.5
  [90fa49ef] + ErrorfreeArithmetic v0.5.2
  [460bff9d] + ExceptionUnwrapping v0.1.11
  [e2ba6199] + ExprTools v0.1.10
  [411431e0] + Extents v0.1.6
  [fa42c844] + FastRounding v0.3.1
  [5789e2e9] + FileIO v1.17.1
  [1a297f60] + FillArrays v1.15.0
  [53c48c17] + FixedPointNumbers v0.8.5
⌃ [f6369f11] + ForwardDiff v0.10.39
  [60bf3e95] + GLPK v1.2.1
  [5c1252a2] + GeometryBasics v0.5.10
  [cd3eb016] + HTTP v1.10.19
  [34004b35] + HypergeometricFunctions v0.3.28
  [842dd82b] + InlineStrings v1.4.5
⌅ [d1acc4aa] + IntervalArithmetic v0.21.2
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.6
  [c8e1da08] + IterTools v1.10.0
  [82899510] + IteratorInterfaceExtensions v1.0.0
⌅ [c3a54625] + JET v0.9.14
  [1019f520] + JLFzf v0.1.11
  [692b3bcd] + JLLWrappers v1.7.1
  [682c06a0] + JSON v1.3.0
  [0f8b85d8] + JSON3 v1.14.3
  [4076af6c] + JuMP v1.29.3
⌅ [aa1ae85d] + JuliaInterpreter v0.9.46
  [70703baa] + JuliaSyntax v1.0.2
  [b964fa9f] + LaTeXStrings v1.4.0
⌅ [b4f0291d] + LazySets v3.1.0
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [e6f89c97] + LoggingExtras v1.2.0
⌃ [6f1432cf] + LoweredCodeUtils v3.2.2
  [1914dd2f] + MacroTools v0.5.16
  [b8f27783] + MathOptInterface v1.46.0
  [739be429] + MbedTLS v1.1.9
  [7269a6da] + MeshIO v0.5.3
  [e1d29d7a] + Missings v1.2.0
  [d8a4904e] + MutableArithmetics v1.6.7
  [77ba4419] + NaNMath v1.1.3
  [5fb14364] + OhMyREPL v0.5.32
  [4d8831e6] + OpenSSL v1.6.0
  [24114763] + OpticSim v0.7.1
  [bac558e1] + OrderedCollections v1.8.1
  [90014a1f] + PDMats v0.11.36
  [69de0a69] + Parsers v2.8.3
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.3
  [21216c6a] + Preferences v1.5.0
  [08abe8d2] + PrettyTables v3.1.0
  [43287f4e] + PtrArrays v1.3.0
  [1fd47b50] + QuadGK v2.11.2
  [379f33d0] + ReachabilityBase v0.3.5
  [3cdcf5f2] + RecipesBase v1.3.4
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
⌃ [295af30f] + Revise v3.7.5
  [79098fc4] + Rmath v0.9.0
  [5eaf0fd0] + RoundingEmulator v0.2.1
  [6c6a2e73] + Scratch v1.3.0
  [91c51154] + SentinelArrays v1.4.8
  [3cc68bcd] + SetRounding v0.2.1
  [777ac1f9] + SimpleBufferStream v1.2.0
  [a2af1166] + SortingAlgorithms v1.2.2
  [276daf66] + SpecialFunctions v2.6.1
  [90137ffa] + StaticArrays v1.9.15
  [1e83bf80] + StaticArraysCore v1.4.4
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.1
  [2913bbd2] + StatsBase v0.34.8
  [4c63d2b9] + StatsFuns v1.5.2
  [69024149] + StringEncodings v0.3.7
  [892a3eda] + StringManipulation v0.4.1
  [856f2bd8] + StructTypes v1.11.0
  [ec057cc2] + StructUtils v2.6.0
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.1
  [3bb67fe8] + TranscodingStreams v0.11.3
  [5c2747f8] + URIs v1.6.1
  [1986cc42] + Unitful v1.25.1
  [a5390f91] + ZipFile v0.10.1
  [6e34b625] + Bzip2_jll v1.0.9+0
  [4e9b3aee] + CRlibm_jll v1.0.1+0
  [5ae413db] + EarCut_jll v2.2.4+0
  [e8aa6df9] + GLPK_jll v5.0.1+1
  [94ce4f54] + Libiconv_jll v1.18.0+0
  [c8ffd9c3] + MbedTLS_jll v2.28.10+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [f50d1b31] + Rmath_jll v0.5.1+0
  [214eeab7] + fzf_jll v0.61.1+0
  [0dad84c5] + ArgTools v1.1.2
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [8ba89e20] + Distributed v1.11.0
  [f43a241f] + Downloads v1.7.0
  [7b1f6079] + FileWatching v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [b27032c2] + LibCURL v1.0.0
  [76f85450] + LibGit2 v1.11.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.13.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [ca575930] + NetworkOptions v1.3.0
  [44cfe95a] + Pkg v1.13.0
  [de0858da] + Printf v1.11.0
  [9abbd945] + Profile v1.11.0
  [3fa0cd96] + REPL v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v1.0.0
  [9e88b42a] + Serialization v1.11.0
  [1a1011a3] + SharedArrays v1.11.0
  [6462fe0b] + Sockets v1.11.0
  [2f01184e] + SparseArrays v1.13.0
  [f489334b] + StyledStrings v1.11.0
  [4607b0f0] + SuiteSparse
  [fa267f1f] + TOML v1.0.3
  [a4e569a6] + Tar v1.10.0
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [781609d7] + GMP_jll v6.3.0+2
  [deac9b47] + LibCURL_jll v8.16.0+0
  [e37daf67] + LibGit2_jll v1.9.1+0
  [29816b5a] + LibSSH2_jll v1.11.3+1
  [14a3606d] + MozillaCACerts_jll v2025.11.4
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.7+0
  [458c3c95] + OpenSSL_jll v3.5.4+0
  [efcefdf7] + PCRE2_jll v10.47.0+0
  [bea87d4a] + SuiteSparse_jll v7.10.1+0
  [83775a58] + Zlib_jll v1.3.1+2
  [3161d3a3] + Zstd_jll v1.5.7+1
  [8e850b90] + libblastrampoline_jll v5.15.0+0
  [8e850ede] + nghttp2_jll v1.68.0+1
  [3f19e933] + p7zip_jll v17.7.0+0
        Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m`

Installation completed after 7.32s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
     Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml`
    Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml`

Precompiling package dependencies...
Precompiling packages...
┌ Warning: precompile directive
│     precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Any, MI, DocExprs, Module, Expr})
│ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive.
└ @ Revise ~/.julia/packages/Revise/03e6k/src/precompile.jl:65
  13054.6 ms  ✓ Revise
WARNING: Imported binding Compiler.ConstCallInfo was undeclared at import time during import to JET.
WARNING: Imported binding Compiler.WorldView was undeclared at import time during import to JET.
WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET.
ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/JET/mOPcK/src/JET.jl:237
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:3148
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2994
 [7] include_string
   @ ./loading.jl:3004 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:342
 [9] _start()
   @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/JET/mOPcK/src/JET.jl:1
in expression starting at stdin:5

  1 dependency had output during precompilation:
┌ Revise
│  ┌ Warning: precompile directive
│  │     precompile(Tuple{mbody.sig.parameters[1], Symbol, Bool, Bool, Iterators.Pairs{Symbol, Bool, Tuple{Symbol}, NamedTuple{(:skip_include,), Tuple{Bool}}}, typeof(methods_by_execution!), Any, MI, DocExprs, Module, Expr})
│  │ failed. Please report an issue in Revise (after checking for duplicates) or remove this directive.
│  └ @ Revise ~/.julia/packages/Revise/03e6k/src/precompile.jl:65
└  

Precompilation completed after 31.74s


################################################################################
# Loading
#

Loading OpticSim...
WARNING: Imported binding Compiler.ConstCallInfo was undeclared at import time during import to JET.
WARNING: Imported binding Compiler.WorldView was undeclared at import time during import to JET.
WARNING: Imported binding Compiler.istopfunction was undeclared at import time during import to JET.
ERROR: LoadError: UndefVarError: `LineInfoNode` not defined in `JET`
Suggestion: check for spelling errors or missing imports.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/JET/mOPcK/src/JET.jl:237
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:3148
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2994
 [7] include_string
   @ ./loading.jl:3004 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:342
 [9] _start()
   @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/JET/mOPcK/src/JET.jl:1
in expression starting at stdin:5
ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module AGFFileReader in package AGFFileReader
because package AGFFileReader does not have SHA in its dependencies:
- Note that the following manifests in the load path were resolved with a potentially
  different DEV version of the current version, which may be the cause of the error.
  Try to re-resolve them in the current version, or consider deleting them if that fails:
    /home/pkgeval/.julia/environments/v1.14/Manifest.toml
- You may have a partially installed environment. Try `Pkg.instantiate()`
  to ensure all packages in the environment are installed.
- Or, if you have AGFFileReader checked out for development and have
  added SHA as a dependency but haven't updated your primary
  environment's manifest file, try `Pkg.resolve()`.
- Otherwise you may need to report an issue with AGFFileReader
Stacktrace:
  [1] macro expansion
    @ ./loading.jl:2488 [inlined]
  [2] macro expansion
    @ ./lock.jl:376 [inlined]
  [3] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2468
  [4] require
    @ ./loading.jl:2444 [inlined]
  [5] eval_import_path
    @ ./module.jl:36 [inlined]
  [6] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)
    @ Base ./module.jl:111
  [7] top-level scope
    @ ~/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6
  [8] include(mapexpr::Function, mod::Module, _path::String)
    @ Base ./Base.jl:310
  [9] top-level scope
    @ ~/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:63
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:309
 [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3148
 [12] top-level scope
    @ stdin:5
 [13] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2994
 [15] include_string
    @ ./loading.jl:3004 [inlined]
 [16] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:342
 [17] _start()
    @ Base ./client.jl:577
in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6
in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:5
in expression starting at stdin:5

  1 dependency had output during precompilation:
┌ AGFFileReader
│  [Output was shown above]
└  
ERROR: LoadError: The following 1 package failed to precompile:

AGFFileReader 
Failed to precompile AGFFileReader [36dd7d7d-c279-4b5c-a024-2ba417cea492] to "/home/pkgeval/.julia/compiled/v1.14/AGFFileReader/jl_S5VYEx" (ProcessExited(1)).

in expression starting at /home/pkgeval/.julia/packages/OpticSim/dsqZd/src/OpticSim.jl:5

Loading failed after 61.83s

ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using OpticSim'`, ProcessExited(1)) [1]

Stacktrace:
 [1] pipeline_error
   @ ./process.jl:611 [inlined]
 [2] run(::Cmd; wait::Bool)
   @ Base ./process.jl:526
 [3] run(::Cmd)
   @ Base ./process.jl:523
 [4] top-level scope
   @ /PkgEval.jl/scripts/evaluate.jl:193
 [5] include(mod::Module, _path::String)
   @ Base ./Base.jl:309
 [6] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:344
 [7] _start()
   @ Base ./client.jl:577
in expression starting at /PkgEval.jl/scripts/evaluate.jl:184

PkgEval failed after 124.81s: package fails to precompile