Package evaluation to load AGFFileReader on Julia 1.14.0-DEV.87 (8bcaa34afa*) started at 2025-11-15T10:11:07.402 ################################################################################ # Set-up # Set-up completed after 0.13s ################################################################################ # Installation # Installing AGFFileReader... Resolving package versions... Updating `~/.julia/environments/v1.14/Project.toml` [36dd7d7d] + AGFFileReader v1.1.3 Updating `~/.julia/environments/v1.14/Manifest.toml` [36dd7d7d] + AGFFileReader v1.1.3 [d1d4a3ce] + BitFlags v0.1.9 [944b1d66] + CodecZlib v0.7.8 [f0e56b4a] + ConcurrentUtilities v2.5.0 [8bb1440f] + DelimitedFiles v1.9.1 [460bff9d] + ExceptionUnwrapping v0.1.11 [cd3eb016] + HTTP v1.10.19 [692b3bcd] + JLLWrappers v1.7.1 [e6f89c97] + LoggingExtras v1.2.0 [739be429] + MbedTLS v1.1.9 [4d8831e6] + OpenSSL v1.6.0 [aea7be01] + PrecompileTools v1.3.3 [21216c6a] + Preferences v1.5.0 [6c6a2e73] + Scratch v1.3.0 [777ac1f9] + SimpleBufferStream v1.2.0 [90137ffa] + StaticArrays v1.9.15 [1e83bf80] + StaticArraysCore v1.4.4 [3bb67fe8] + TranscodingStreams v0.11.3 [5c2747f8] + URIs v1.6.1 [1986cc42] + Unitful v1.25.1 [a5390f91] + ZipFile v0.10.1 [c8ffd9c3] + MbedTLS_jll v2.28.10+0 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.13.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v1.0.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.4+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 Installation completed after 7.08s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Project No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` Manifest No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module AGFFileReader in package AGFFileReader because package AGFFileReader does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have AGFFileReader checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with AGFFileReader Stacktrace:  [1] macro expansion  @ ./loading.jl:2488 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [4] require  @ ./loading.jl:2444 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)  @ Base ./module.jl:111  [7] top-level scope  @ ~/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6  [8] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [9] top-level scope  @ ~/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:63  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [15] include_string  @ ./loading.jl:3004 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6 in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:5 in expression starting at stdin:5 Precompilation completed after 18.55s ################################################################################ # Loading # Loading AGFFileReader... ERROR: LoadError: ArgumentError: Cannot load (`using/import`) module SHA into module AGFFileReader in package AGFFileReader because package AGFFileReader does not have SHA in its dependencies: - Note that the following manifests in the load path were resolved with a potentially  different DEV version of the current version, which may be the cause of the error.  Try to re-resolve them in the current version, or consider deleting them if that fails:  /home/pkgeval/.julia/environments/v1.14/Manifest.toml - You may have a partially installed environment. Try `Pkg.instantiate()`  to ensure all packages in the environment are installed. - Or, if you have AGFFileReader checked out for development and have  added SHA as a dependency but haven't updated your primary  environment's manifest file, try `Pkg.resolve()`. - Otherwise you may need to report an issue with AGFFileReader Stacktrace:  [1] macro expansion  @ ./loading.jl:2488 [inlined]  [2] macro expansion  @ ./lock.jl:376 [inlined]  [3] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2468  [4] require  @ ./loading.jl:2444 [inlined]  [5] eval_import_path  @ ./module.jl:36 [inlined]  [6] _eval_import(imported::Bool, to::Module, from::Nothing, paths::Expr)  @ Base ./module.jl:111  [7] top-level scope  @ ~/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6  [8] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:310  [9] top-level scope  @ ~/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:63  [10] include(mod::Module, _path::String)  @ Base ./Base.jl:309  [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:3148  [12] top-level scope  @ stdin:5  [13] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2994  [15] include_string  @ ./loading.jl:3004 [inlined]  [16] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:342  [17] _start()  @ Base ./client.jl:577 in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/sources.jl:6 in expression starting at /home/pkgeval/.julia/packages/AGFFileReader/aoRFM/src/AGFFileReader.jl:5 in expression starting at stdin:5 1 dependency had output during precompilation: ┌ AGFFileReader │ [Output was shown above] └ ERROR: The following 1 package failed to precompile: AGFFileReader Failed to precompile AGFFileReader [36dd7d7d-c279-4b5c-a024-2ba417cea492] to "/home/pkgeval/.julia/compiled/v1.14/AGFFileReader/jl_6VcgUF" (ProcessExited(1)). Loading failed after 12.78s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using AGFFileReader'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:611 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:526 [3] run(::Cmd) @ Base ./process.jl:523 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:309 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:344 [7] _start() @ Base ./client.jl:577 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 161.52s: package fails to precompile