Package evaluation to test XPalm on Julia 1.12.7-DEV.45 (88b38b4bc0*) started at 2026-06-24T16:03:43.445 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.39s ################################################################################ # Installation # Installing XPalm... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [6b523e1e] + XPalm v0.6.1 Updating `~/.julia/environments/v1.12/Manifest.toml` [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.1 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [13072b0f] + AxisAlgorithms v1.1.0 [198e06fe] + BangBang v0.4.9 [9718e550] + Baselet v0.1.1 [d1d4a3ce] + BitFlags v0.1.10 [336ed68f] + CSV v0.10.16 [d360d2e6] + ChainRulesCore v1.26.1 [da1fd8a2] + CodeTracking v3.0.2 [6309b1aa] + CodecInflate64 v0.1.3 [944b1d66] + CodecZlib v0.7.8 [35d6a980] + ColorSchemes v3.31.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [5ae59095] + Colors v0.13.1 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.1 [187b0558] + ConstructionBase v1.6.0 [6add18c4] + ContextVariablesX v0.1.3 [150eb455] + CoordinateTransformations v0.6.4 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 [8bb1440f] + DelimitedFiles v1.9.1 [ffbed154] + DocStringExtensions v0.9.5 [460bff9d] + ExceptionUnwrapping v0.1.11 [8f5d6c58] + EzXML v1.2.3 [cc61a311] + FLoops v0.2.2 [b9860ae5] + FLoopsBase v0.1.1 [48062228] + FilePathsBase v0.9.24 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [5c1252a2] + GeometryBasics v0.5.11 [86223c79] + Graphs v1.14.0 ⌅ [cd3eb016] + HTTP v1.11.0 ⌅ [eafb193a] + Highlights v0.5.3 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.5 [0c81fc1b] + InputBuffers v1.1.1 [a98d9a8b] + Interpolations v0.16.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 [682c06a0] + JSON v1.6.1 [b14d175d] + JuliaVariables v0.2.4 [b964fa9f] + LaTeXStrings v1.4.0 [e6f89c97] + LoggingExtras v1.2.0 [d8e11817] + MLStyle v0.4.17 [1914dd2f] + MacroTools v0.5.16 [739be429] + MbedTLS v1.1.10 [fa8bd995] + MetaGraphsNext v0.8.0 [128add7d] + MicroCollections v0.2.0 [e1d29d7a] + Missings v1.2.0 [dd4a991b] + MultiScaleTreeGraph v0.15.4 [af6c499f] + MutableNamedTuples v0.1.3 [1c23619d] + MyterialColors v0.3.0 [71a1bf82] + NameResolution v0.1.5 [6fe1bfb0] + OffsetArrays v1.17.0 [4d8831e6] + OpenSSL v1.6.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 ⌅ [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.6 [5edaa67e] + PlantGeom v0.19.2 [4630fe09] + PlantMeteo v0.8.4 [9a576370] + PlantSimEngine v0.14.1 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [8162dcfd] + PrettyPrint v0.2.0 [08abe8d2] + PrettyTables v3.3.2 [33c8b6b6] + ProgressLogging v0.1.6 [94ee1d12] + Quaternions v0.7.7 [c84ed2f1] + Ratios v0.4.5 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [6038ab10] + Rotations v1.7.1 [91c51154] + SentinelArrays v1.4.10 [efcf1570] + Setfield v1.1.2 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.6 [a2af1166] + SortingAlgorithms v1.2.3 [171d559e] + SplittablesBase v0.1.15 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 [10745b16] + Statistics v1.11.1 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.4 [ec057cc2] + StructUtils v2.8.2 [ab02a1b2] + TableOperations v1.2.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [62fd8b95] + TensorCore v0.1.1 [22787eb5] + Term v2.0.8 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.85 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [1cfade01] + UnicodeFun v0.4.1 [1986cc42] + Unitful v1.28.0 [ea10d353] + WeakRefStrings v1.4.3 [efce3f68] + WoodburyMatrices v1.1.0 [76eceee3] + WorkerUtilities v1.6.1 [fdbf4ff8] + XLSX v0.11.11 [72c71f33] + XML v0.3.9 [6b523e1e] + XPalm v0.6.1 [ddb6d928] + YAML v0.4.16 [49080126] + ZipArchives v2.6.0 [5ae413db] + EarCut_jll v2.2.4+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [02c8fc9c] + XML2_jll v2.15.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 6.85s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 10561.4 ms ✓ BaseDirs 834.7 ms ✓ PolygonOps 892.4 ms ✓ Contour 1743.5 ms ✓ InitialValues 894.7 ms ✓ MyterialColors 927.3 ms ✓ TriplotBase 2626.2 ms ✓ Format 866.3 ms ✓ IntegerMathUtils 937.2 ms ✓ PrettyPrint 3899.2 ms ✓ Observables 1005.7 ms ✓ RoundingEmulator 830.8 ms ✓ DefineSingletons 2958.7 ms ✓ AdaptivePredicates 32205.0 ms ✓ MLStyle 741.2 ms ✓ MutableNamedTuples 2447.5 ms ✓ Baselet 1535.2 ms ✓ SignedDistanceFields 4427.5 ms ✓ XML 4309.0 ms ✓ Graphics 1330.5 ms ✓ Animations 1056.3 ms ✓ ProgressLogging 42988.7 ms ✓ Unitful 918.1 ms ✓ Scratch 2336.9 ms ✓ Accessors → IntervalSetsExt 12032.3 ms ✓ Highlights 988.0 ms ✓ ContextVariablesX 3162.3 ms ✓ UnicodeFun 3803.6 ms ✓ SplittablesBase 1267.7 ms ✓ TableOperations 1459.2 ms ✓ CoreMath_jll 1479.3 ms ✓ Graphite2_jll 1455.0 ms ✓ Libmount_jll 1448.3 ms ✓ Xorg_libpciaccess_jll 1477.6 ms ✓ libfdk_aac_jll 1475.7 ms ✓ LAME_jll 1454.9 ms ✓ Pixman_jll 1538.5 ms ✓ CRlibm_jll 1447.2 ms ✓ Ogg_jll 1512.8 ms ✓ x265_jll 1471.8 ms ✓ x264_jll 1455.2 ms ✓ libaom_jll 1465.8 ms ✓ Opus_jll 1455.6 ms ✓ Libffi_jll 1441.1 ms ✓ isoband_jll 1437.8 ms ✓ FriBidi_jll 1456.2 ms ✓ Libuuid_jll 1442.5 ms ✓ OpenBLASConsistentFPCSR_jll 1802.8 ms ✓ MuladdMacro 21304.5 ms ✓ Automa 1453.1 ms ✓ FreeType2_jll 30216.3 ms ✓ GeometryBasics 1071.0 ms ✓ StringEncodings 3141.0 ms ✓ GettextRuntime_jll 1448.3 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 29983.7 ms ✓ PlotUtils 1625.9 ms ✓ FilePaths 9440.5 ms ✓ Xorg_libXrender_jll 1512.8 ms ✓ Xorg_libXfixes_jll 1388.8 ms ✓ ColorVectorSpace → SpecialFunctionsExt 9814.2 ms ✓ Rotations → RotationsRecipesBaseExt 4190.3 ms ✓ ColorBrewer 4094.2 ms ✓ Revise → DistributedExt 5767.7 ms ✓ MetaGraphsNext 3546.5 ms ✓ Graphs → GraphsSharedArraysExt 1062.8 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 15246.8 ms ✓ BangBang 1158.3 ms ✓ Primes 847.0 ms ✓ NameResolution 4535.5 ms ✓ ComputePipeline 85567.7 ms ✓ XLSX 1939.5 ms ✓ Unitful → ConstructionBaseUnitfulExt 1970.7 ms ✓ Unitful → NaNMathExt 1959.4 ms ✓ Unitful → InverseFunctionsUnitfulExt 2132.0 ms ✓ Unitful → PrintfExt 2280.5 ms ✓ Accessors → UnitfulExt 3850.0 ms ✓ Interpolations → InterpolationsUnitfulExt 1141.2 ms ✓ RelocatableFolders 1076.7 ms ✓ FLoopsBase 103565.0 ms ✓ Term 991.0 ms ✓ CoreMath 3196.6 ms ✓ libdrm_jll 1336.5 ms ✓ CRlibm 3244.4 ms ✓ libvorbis_jll 904.7 ms ✓ Isoband 1958.9 ms ✓ FreeType 8131.3 ms ✓ Fontconfig_jll 16227.4 ms ✓ GridLayoutBase 2739.5 ms ✓ GeometryBasics → IntervalSetsExt 3084.9 ms ✓ Packing 9672.4 ms ✓ ShaderAbstractions 5279.9 ms ✓ YAML 8010.8 ms ✓ Glib_jll 1450.5 ms ✓ FilePaths → FilePathsURIsExt 1788.8 ms ✓ BangBang → BangBangStaticArraysExt 7883.9 ms ✓ BangBang → BangBangDataFramesExt 1304.4 ms ✓ BangBang → BangBangChainRulesCoreExt 7971.0 ms ✓ BangBang → BangBangStructArraysExt 1252.5 ms ✓ BangBang → BangBangTablesExt 2552.1 ms ✓ MicroCollections 2619.1 ms ✓ FFTA 12641.1 ms ✓ JuliaVariables 3956.8 ms ✓ XLSX → StyledStringsSstsExt 12745.0 ms ✓ libva_jll 8643.1 ms ✓ IntervalArithmetic 40086.6 ms ✓ FreeTypeAbstraction 275765.2 ms ✓ PlantMeteo 29056.6 ms ✓ Cairo_jll 22032.4 ms ✓ Transducers 103284.0 ms ✓ KernelDensity 187404.1 ms ✓ MultiScaleTreeGraph 1143.1 ms ✓ IntervalArithmetic → IntervalArithmeticSparseArraysExt 739.4 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 883.9 ms ✓ IntervalArithmetic → IntervalArithmeticIrrationalConstantsExt 3626.8 ms ✓ IntervalArithmetic → IntervalArithmeticRecipesBaseExt 1082.7 ms ✓ IntervalArithmetic → IntervalArithmeticLinearAlgebraExt 59165.2 ms ✓ MathTeXEngine 23445.1 ms ✓ HarfBuzz_jll 87431.0 ms ✓ Transducers → TransducersDataFramesExt 1485.6 ms ✓ Transducers → TransducersAdaptExt 11877.0 ms ✓ FLoops 87844.4 ms ✓ PlantGeom 6483.6 ms ✓ ExactPredicates 17498.6 ms ✓ libass_jll 1154.9 ms ✓ Pango_jll 226287.3 ms ✓ PlantSimEngine 8765.6 ms ✓ DelaunayTriangulation 14152.8 ms ✓ FFMPEG_jll 6351.5 ms ✓ Cairo 14869.5 ms ✓ PlantSimEngine → PlantSimEngineGraphEditorExt 65048.9 ms ✓ PlantGeom → PlantGeomPlantSimEngineExt 542317.0 ms ✓ Makie ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_10910.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x00007eade40bb490 Total snapshots: 657. Utilization: 0% ╎657 @Base/asyncevent.jl:359 (::Base.var"#653#654"{FileWatching.Pidfile.var… ╎ 657 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 657 @Base/condition.jl:136 wait ╎ 657 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 657 @Base/task.jl:1228 wait() 656╎ 657 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_56085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_finish_task at /source/src/task.c:342 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000074d947136950 Total snapshots: 632. Utilization: 0% ╎632 @Base/task.jl:868 task_done_hook(t::Task) ╎ 632 @Base/task.jl:1228 wait() 631╎ 632 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_10910.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 11877728 (Pool: 11876787; Big: 941); GC: 11 PkgEval terminated after 2731.95s: test duration exceeded the time limit