Package evaluation to test NeuroStats on Julia 1.12.7-DEV.45 (88b38b4bc0*) started at 2026-06-24T16:12:48.952 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Activating project at `~/.julia/environments/v1.12` Set-up completed after 8.38s ################################################################################ # Installation # Installing NeuroStats... Resolving package versions... Updating `~/.julia/environments/v1.12/Project.toml` [d956cd15] + NeuroStats v0.2.5 Updating `~/.julia/environments/v1.12/Manifest.toml` ⌃ [da404889] + ARFFFiles v1.5.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.44 [79e6a3ab] + Adapt v4.6.1 [66dad0bd] + AliasTables v1.1.3 [7d9fca2a] + Arpack v0.5.4 [4c555306] + ArrayLayouts v1.12.2 [69666777] + Arrow v2.8.1 [31f734f8] + ArrowTypes v2.3.0 [a9b6321e] + Atomix v1.1.3 [13072b0f] + AxisAlgorithms v1.1.0 [093aae92] + BSplineKit v0.19.2 [aae01518] + BandedMatrices v1.11.0 [d1d4a3ce] + BitFlags v0.1.10 [c3b6d118] + BitIntegers v0.3.7 [e28b5b4c] + Bootstrap v2.4.0 [fa961155] + CEnum v0.5.0 [336ed68f] + CSV v0.10.16 ⌅ [324d7699] + CategoricalArrays v0.10.9 ⌅ [af321ab8] + CategoricalDistributions v0.1.15 [d360d2e6] + ChainRulesCore v1.26.1 [aaaa29a8] + Clustering v0.15.8 [523fee87] + CodecBzip2 v0.8.5 [5ba52731] + CodecLz4 v0.4.6 [944b1d66] + CodecZlib v0.7.8 [6b39b394] + CodecZstd v0.8.7 [3da002f7] + ColorTypes v0.12.1 [861a8166] + Combinatorics v1.1.0 [38540f10] + CommonSolve v0.2.8 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.1.0 [34da2185] + Compat v4.18.1 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [f0e56b4a] + ConcurrentUtilities v2.5.1 [187b0558] + ConstructionBase v1.6.0 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.8.2 [864edb3b] + DataStructures v0.19.5 [e2d170a0] + DataValueInterfaces v1.0.0 [8bb1440f] + DelimitedFiles v1.9.1 [85a47980] + Dictionaries v0.4.6 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.16.0 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.127 [ffbed154] + DocStringExtensions v0.9.5 [792122b4] + EarlyStopping v0.3.0 [4e289a0a] + EnumX v1.0.7 [460bff9d] + ExceptionUnwrapping v0.1.11 [e2ba6199] + ExprTools v0.1.10 [b86e33f2] + FFTA v0.3.1 [442a2c76] + FastGaussQuadrature v1.3.0 [33837fe5] + FeatureSelection v0.2.6 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.16.0 ⌅ [53c48c17] + FixedPointNumbers v0.8.6 [f6369f11] + ForwardDiff v1.4.1 [38e38edf] + GLM v1.9.5 [46192b85] + GPUArraysCore v0.2.0 ⌅ [cd3eb016] + HTTP v1.11.0 [076d061b] + HashArrayMappedTries v0.2.0 [87dc4568] + HiGHS v1.23.0 [34004b35] + HypergeometricFunctions v0.3.28 [09f84164] + HypothesisTests v0.11.8 [615f187c] + IfElse v0.1.1 [313cdc1a] + Indexing v1.1.1 [842dd82b] + InlineStrings v1.4.5 [18e54dd8] + IntegerMathUtils v0.1.3 [a98d9a8b] + Interpolations v0.16.3 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 [92d709cd] + IrrationalConstants v0.2.6 [b3c1a2ee] + IterationControl v0.5.4 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.8.0 ⌅ [682c06a0] + JSON v0.21.4 [0f8b85d8] + JSON3 v1.14.3 [4076af6c] + JuMP v1.30.1 [63c18a36] + KernelAbstractions v0.9.41 [5ab0869b] + KernelDensity v0.6.12 [b964fa9f] + LaTeXStrings v1.4.0 [a5e1c1ea] + LatinHypercubeSampling v1.9.0 ⌅ [92ad9a40] + LearnAPI v1.0.1 [6d4de0fb] + LinRegOutliers v0.11.8 [4345ca2d] + Loess v0.6.6 ⌅ [2ab3a3ac] + LogExpFunctions v0.3.29 [e6f89c97] + LoggingExtras v1.2.0 [c2834f40] + MLCore v1.0.2 ⌅ [64a0f543] + MLFlowClient v0.5.1 ⌅ [add582a8] + MLJ v0.20.9 [45f359ea] + MLJBalancing v0.1.6 ⌃ [a7f614a8] + MLJBase v1.9.2 ⌃ [50ed68f4] + MLJEnsembles v0.4.3 ⌅ [7b7b8358] + MLJFlow v0.5.0 [614be32b] + MLJIteration v0.6.5 [e80e1ace] + MLJModelInterface v1.12.1 ⌅ [d491faf4] + MLJModels v0.17.9 [03970b2e] + MLJTuning v0.8.9 [f1d291b0] + MLUtils v0.4.9 [1914dd2f] + MacroTools v0.5.16 [8c4f8055] + MathOptIIS v0.2.0 [b8f27783] + MathOptInterface v1.51.1 [739be429] + MbedTLS v1.1.10 [e1d29d7a] + Missings v1.2.0 [ff71e718] + MixedModels v5.7.0 [7e9fb7ac] + MixedModelsDatasets v0.1.2 [78c3b35d] + Mocking v0.8.1 [46d2c3a1] + MuladdMacro v0.2.5 [6f286f6a] + MultivariateStats v0.10.4 [d8a4904e] + MutableArithmetics v1.8.0 [76087f3c] + NLopt v1.2.1 [872c559c] + NNlib v0.9.36 [77ba4419] + NaNMath v1.1.4 [b8a86587] + NearestNeighbors v0.4.27 [d956cd15] + NeuroStats v0.2.5 [6fe1bfb0] + OffsetArrays v1.17.0 [8b6db2d4] + OpenML v0.3.3 [4d8831e6] + OpenSSL v1.6.1 ⌅ [bac558e1] + OrderedCollections v1.8.2 [90014a1f] + PDMats v0.11.37 ⌅ [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.6 [2dfb63ee] + PooledArrays v1.4.3 [aea7be01] + PrecompileTools v1.3.4 [21216c6a] + Preferences v1.5.2 [54e16d92] + PrettyPrinting v0.4.2 ⌅ [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [92933f4c] + ProgressMeter v1.11.0 [43287f4e] + PtrArrays v1.4.0 [1fd47b50] + QuadGK v2.11.3 [c84ed2f1] + Ratios v0.4.5 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [545c379f] + RegressionFormulae v0.1.4 [05181044] + RelocatableFolders v1.0.1 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.9.0 [f2b01f46] + Roots v3.0.0 [431bcebd] + SciMLPublic v1.1.0 ⌃ [321657f4] + ScientificTypes v3.1.1 [30f210dd] + ScientificTypesBase v3.1.0 [7e506255] + ScopedValues v1.6.2 [6c6a2e73] + Scratch v1.3.0 [91c51154] + SentinelArrays v1.4.10 [1277b4bf] + ShiftedArrays v2.0.0 [605ecd9f] + ShowCases v0.1.0 [777ac1f9] + SimpleBufferStream v1.2.0 [699a6c99] + SimpleTraits v0.9.6 [8e55fee6] + Simpson v1.0.1 [a2af1166] + SortingAlgorithms v1.2.3 [276daf66] + SpecialFunctions v2.8.0 [03a91e81] + SplitApplyCombine v1.3.0 [860ef19b] + StableRNGs v1.0.4 [aedffcd0] + Static v1.4.1 [90137ffa] + StaticArrays v1.9.18 [1e83bf80] + StaticArraysCore v1.4.4 ⌅ [a19d573c] + StatisticalMeasures v0.2.1 [c062fc1d] + StatisticalMeasuresBase v0.1.4 [64bff920] + StatisticalTraits v3.5.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.8.0 [2913bbd2] + StatsBase v0.34.12 ⌅ [4c63d2b9] + StatsFuns v1.5.2 [2cb19f9e] + StatsKit v0.3.1 [3eaba693] + StatsModels v0.7.10 [892a3eda] + StringManipulation v0.4.4 ⌅ [354b36f9] + StringViews v1.3.7 [856f2bd8] + StructTypes v1.11.0 [dc5dba14] + TZJData v1.5.0+2025b [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.1 [9e3dc215] + TimeSeries v0.26.0 [f269a46b] + TimeZones v1.22.2 [3bb67fe8] + TranscodingStreams v0.11.3 [9d95f2ec] + TypedTables v1.4.6 [5c2747f8] + URIs v1.6.1 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.1 [ea10d353] + WeakRefStrings v1.4.3 [efce3f68] + WoodburyMatrices v1.1.0 [76eceee3] + WorkerUtilities v1.6.1 ⌅ [68821587] + Arpack_jll v3.5.2+0 [6e34b625] + Bzip2_jll v1.0.9+0 [8fd58aa0] + HiGHS_jll v1.14.0+0 [5ced341a] + Lz4_jll v1.10.1+0 [c8ffd9c3] + MbedTLS_jll v2.28.1010+0 [079eb43e] + NLopt_jll v2.11.0+0 [656ef2d0] + OpenBLAS32_jll v0.3.33+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [53656f53] + mrfDepth_jll v1.0.14+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.1 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.15.0+0 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2025.11.4 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.7+0 [458c3c95] + OpenSSL_jll v3.5.6+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.15.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.7.0+0 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 6.78s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling packages... 2754.3 ms ✓ StringViews 6074.0 ms ✓ PrettyPrinting 1216.0 ms ✓ TZJData 1209.5 ms ✓ LearnAPI 858.1 ms ✓ Simpson 1000.1 ms ✓ ArrowTypes 7885.4 ms ✓ CategoricalArrays 1163.1 ms ✓ EarlyStopping 1133.6 ms ✓ RelocatableFolders 2490.8 ms ✓ LatinHypercubeSampling 1465.4 ms ✓ Lz4_jll 1418.5 ms ✓ Arpack_jll 1510.9 ms ✓ HiGHS_jll 1458.7 ms ✓ OpenBLAS32_jll 1488.4 ms ✓ mrfDepth_jll 35656.0 ms ✓ PrettyTables 1506.2 ms ✓ Mocking 2694.2 ms ✓ FFTA 4352.3 ms ✓ FastGaussQuadrature 7621.3 ms ✓ MLFlowClient 5849.3 ms ✓ StatsFuns 22926.5 ms ✓ ForwardDiff 12442.9 ms ✓ Clustering 57692.4 ms ✓ BandedMatrices 9603.0 ms ✓ NNlib → NNlibSpecialFunctionsExt 23559.1 ms ✓ MLUtils 886.3 ms ✓ InlineStrings → ArrowTypesExt 1203.5 ms ✓ JSON3 → JSON3ArrowExt 1133.2 ms ✓ CategoricalArrays → CategoricalArraysJSONExt 1042.5 ms ✓ CategoricalArrays → CategoricalArraysStructTypesExt 5763.4 ms ✓ ARFFFiles 4028.7 ms ✓ CategoricalArrays → CategoricalArraysRecipesBaseExt 1072.2 ms ✓ CategoricalArrays → CategoricalArraysSentinelArraysExt 3658.0 ms ✓ IterationControl 2150.9 ms ✓ CodecLz4 1408.4 ms ✓ Arpack 44703.6 ms ✓ TimeSeries 92597.1 ms ✓ DataFrames 11444.0 ms ✓ TimeZones 1120.7 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 1974.5 ms ✓ Loess 4153.4 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 13837.8 ms ✓ StatsModels 11701.2 ms ✓ Distributions 32468.2 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 12353.7 ms ✓ Roots → RootsForwardDiffExt 109357.3 ms ✓ MathOptInterface 23424.3 ms ✓ Interpolations → InterpolationsForwardDiffExt 40058.9 ms ✓ NNlib → NNlibForwardDiffExt 4903.1 ms ✓ BandedMatrices → BandedMatricesSparseArraysExt 73586.7 ms ✓ StatisticalMeasuresBase 21766.6 ms ✓ OpenML 5300.3 ms ✓ TimeZones → TimeZonesRecipesBaseExt 21508.5 ms ✓ Arrow 22443.8 ms ✓ RegressionFormulae 24826.1 ms ✓ HypothesisTests 3606.3 ms ✓ Distributions → DistributionsTestExt 5957.3 ms ✓ Distributions → DistributionsChainRulesCoreExt 5454.5 ms ✓ GLM 87453.7 ms ✓ ScientificTypes 6886.2 ms ✓ MultivariateStats 105668.3 ms ✓ Bootstrap 107470.3 ms ✓ MathOptIIS 51835.9 ms ✓ JuMP 6221.0 ms ✓ NLopt → NLoptMathOptInterfaceExt 106512.7 ms ✓ BSplineKit 8279.8 ms ✓ MixedModelsDatasets 5775.3 ms ✓ CategoricalArrays → CategoricalArraysArrowExt 26253.3 ms ✓ KernelDensity 7243.1 ms ✓ CategoricalDistributions 139297.1 ms ✓ HiGHS 307288.0 ms ✓ MixedModels 196825.8 ms ✓ StatisticalMeasures 40163.2 ms ✓ MLJModels 39765.5 ms ✓ MLJBase 9164.7 ms ✓ MLJEnsembles 342975.7 ms ✓ LinRegOutliers ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_10910.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000073e86854e2c0 Total snapshots: 515. Utilization: 0% ╎515 @Base/asyncevent.jl:359 (::Base.var"#653#654"{FileWatching.Pidfile.var… ╎ 515 @Base/asyncevent.jl:185 _trywait(t::Timer) ╎ 515 @Base/condition.jl:136 wait ╎ 515 @Base/condition.jl:141 wait(c::Base.GenericCondition{Base.Threads.S… ╎ 515 @Base/task.jl:1228 wait() 514╎ 515 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronize… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 task_done_hook at ./task.jl:868 jfptr_task_done_hook_56085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] jl_finish_task at /source/src/task.c:342 start_task at /source/src/task.c:1264 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.12/Profile/src/Profile.jl:1361 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (default) Task 0x000071e3671f54b0 Total snapshots: 503. Utilization: 0% ╎503 @Base/task.jl:868 task_done_hook(t::Task) ╎ 503 @Base/task.jl:1228 wait() 502╎ 503 @Base/task.jl:1216 poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:34 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 #653 at ./asyncevent.jl:359 jfptr_YY.653_10910.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 12676256 (Pool: 12675338; Big: 918); GC: 12 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:156 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:457 poptask at ./task.jl:1216 wait at ./task.jl:1228 #wait#406 at ./condition.jl:141 wait at ./condition.jl:136 [inlined] _trywait at ./asyncevent.jl:185 profile_printing_listener at ./Base.jl:332 #start_profile_listener##0 at ./Base.jl:352 jfptr_YY.start_profile_listenerYY.YY.0_15910.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:4014 [inlined] ijl_apply_generic at /source/src/gf.c:4214 jl_apply at /source/src/julia.h:2397 [inlined] start_task at /source/src/task.c:1253 unknown function (ip: (nil)) at (unknown file) Allocations: 15642171 (Pool: 15641491; Big: 680); GC: 12 PkgEval terminated after 2742.36s: test duration exceeded the time limit