Package evaluation of GeoStatsTransforms on Julia 1.11.5 (760b2e5b739) started at 2025-05-30T11:32:52.135 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 4.81s ################################################################################ # Installation # Installing GeoStatsTransforms... Resolving package versions... Updating `~/.julia/environments/v1.11/Project.toml` [725d9659] + GeoStatsTransforms v0.12.8 Updating `~/.julia/environments/v1.11/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [35492f91] + AdaptivePredicates v1.2.0 [66dad0bd] + AliasTables v1.1.3 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.19.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [0e736298] + Bessels v0.2.8 [96374032] + CRlibm v1.0.2 [324d7699] + CategoricalArrays v0.10.8 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [ae650224] + ChunkSplitters v3.1.2 [7a955b69] + CircularArrays v1.4.0 [aaaa29a8] + Clustering v0.15.8 [5900dafe] + CoDa v1.5.0 [35d6a980] + ColorSchemes v3.29.0 [3da002f7] + ColorTypes v0.12.1 [c3611d14] + ColorVectorSpace v0.11.0 [03fe91ce] + Colorfy v1.1.0 [5ae59095] + Colors v0.13.1 [9cc86067] + ColumnSelectors v1.0.0 [861a8166] + Combinatorics v1.0.3 [bbf7d656] + CommonSubexpressions v0.3.1 [f70d9fcc] + CommonWorldInvalidations v1.0.0 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [b46f11dc] + CoordRefSystems v0.17.7 [a8cc5b0e] + Crayons v4.1.1 [9a962f9c] + DataAPI v1.16.0 [6cb2f572] + DataScienceTraits v1.0.2 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [927a84f5] + DelaunayTriangulation v1.6.4 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 ⌅ [a0c0ee7d] + DifferentiationInterface v0.6.54 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.120 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [f6369f11] + ForwardDiff v1.0.1 [46192b85] + GPUArraysCore v0.2.0 [6771c435] + GeoStatsFunctions v0.10.27 [ad987403] + GeoStatsModels v0.11.2 [725d9659] + GeoStatsTransforms v0.12.8 [e502b557] + GeoTables v1.24.12 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.14 [615f187c] + IfElse v0.1.1 [22cec73e] + InitialValues v0.3.1 [d1acc4aa] + IntervalArithmetic v0.22.35 [8197267c] + IntervalSets v0.7.11 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [b964fa9f] + LaTeXStrings v1.4.0 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [1914dd2f] + MacroTools v0.5.16 [eacbb407] + Meshes v0.53.12 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.9.1 [77ba4419] + NaNMath v1.1.3 [b8a86587] + NearestNeighbors v0.4.21 [2f6b4ddb] + NelderMead v0.4.0 [6fe1bfb0] + OffsetArrays v1.17.0 [67456a42] + OhMyThreads v0.8.3 [429524aa] + Optim v1.12.0 [bac558e1] + OrderedCollections v1.8.1 [90014a1f] + PDMats v0.11.35 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌅ [aea7be01] + PrecompileTools v1.2.1 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [94ee1d12] + Quaternions v0.7.6 [b3c3ace0] + RangeArrays v0.3.2 [c1ae055f] + RealDot v0.1.0 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [5eaf0fd0] + RoundingEmulator v0.2.1 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.1 [91464d47] + StableTasks v0.1.7 [aedffcd0] + Static v1.2.0 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.1 [2913bbd2] + StatsBase v0.34.5 [4c63d2b9] + StatsFuns v1.5.0 [892a3eda] + StringManipulation v0.4.1 [09ab397b] + StructArrays v0.7.1 [e5d66e97] + TableDistances v1.1.0 [3783bdb8] + TableTraits v1.0.1 [0d432bfd] + TableTransforms v1.34.1 [bd369af6] + Tables v1.12.0 [ed4db957] + TaskLocalValues v0.1.2 [62fd8b95] + TensorCore v0.1.1 [06e1c1a7] + TiledIteration v0.5.0 [28dd2a49] + TransformsBase v1.6.0 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.1 [e88e6eb3] + Zygote v0.7.7 [700de1a5] + ZygoteRules v0.2.7 [4e9b3aee] + CRlibm_jll v1.0.1+0 [6cdc7f73] + OpenBLASConsistentFPCSR_jll v0.3.29+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.11.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.2.0 [44cfe95a] + Pkg v1.11.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.1.1+0 [deac9b47] + LibCURL_jll v8.6.0+0 [e37daf67] + LibGit2_jll v1.7.2+0 [29816b5a] + LibSSH2_jll v1.11.0+1 [c8ffd9c3] + MbedTLS_jll v2.28.6+0 [14a3606d] + MozillaCACerts_jll v2023.12.12 [4536629a] + OpenBLAS_jll v0.3.27+1 [05823500] + OpenLibm_jll v0.8.5+0 [bea87d4a] + SuiteSparse_jll v7.7.0+0 [83775a58] + Zlib_jll v1.2.13+1 [8e850b90] + libblastrampoline_jll v5.11.0+0 [8e850ede] + nghttp2_jll v1.59.0+0 [3f19e933] + p7zip_jll v17.4.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 3.41s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling package dependencies... Precompiling CUDA_Driver_jll... 982.2 ms ✓ CUDA_Driver_jll 1 dependency successfully precompiled in 5 seconds. 25 already precompiled. ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 7 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] wait at ./process.jl:694 wait at ./process.jl:687 [inlined] success at ./process.jl:556 jfptr_success_67764.1 at /opt/julia/lib/julia/sys.so (unknown line) #compilecache#1121 at ./loading.jl:3082 compilecache at ./loading.jl:3038 [inlined] #33 at ./precompilation.jl:933 with_logstate at ./logging/logging.jl:522 with_logger at ./logging/logging.jl:632 [inlined] #32 at ./precompilation.jl:927 [inlined] #mkpidlock#7 at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:95 jfptr_YY.mkpidlockYY.7_76093.1 at /opt/julia/lib/julia/sys.so (unknown line) mkpidlock at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:92 #mkpidlock#6 at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 [inlined] mkpidlock at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:90 jfptr_mkpidlock_44807.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] do_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/builtins.c:831 #trymkpidlock#11 at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:116 jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] do_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/builtins.c:831 trymkpidlock at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/usr/share/julia/stdlib/v1.11/FileWatching/src/pidfile.jl:114 precompile_pkgs_maybe_cachefile_lock at ./precompilation.jl:1115 jfptr_precompile_pkgs_maybe_cachefile_lock_71983.1 at /opt/julia/lib/julia/sys.so (unknown line) macro expansion at ./timing.jl:421 [inlined] #29 at ./precompilation.jl:926 jfptr_YY.29_71878.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] start_task at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/task.c:1202 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x0000770ad5c14e20 Total snapshots: 189. Utilization: 0% ╎189 @Base/precompilation.jl:926; (::Base.Precompilation.var"#29#69"{Bool, B… ╎ 189 @Base/timing.jl:421; macro expansion ╎ 189 …ase/precompilation.jl:1115; precompile_pkgs_maybe_cachefile_lock(f::… ╎ 189 …tching/src/pidfile.jl:114; kwcall(::@NamedTuple{stale_age::Int64}, … ╎ 189 …tching/src/pidfile.jl:116; trymkpidlock(::Function, ::Vararg{Any};… ╎ 189 …tching/src/pidfile.jl:90; kwcall(::@NamedTuple{stale_age::Int64, … ╎ ╎ 189 …ching/src/pidfile.jl:90; #mkpidlock#6 ╎ ╎ 189 …ching/src/pidfile.jl:92; kwcall(::@NamedTuple{stale_age::Int64,… ╎ ╎ 189 …hing/src/pidfile.jl:95; mkpidlock(f::Base.Precompilation.var"#… ╎ ╎ 189 …e/precompilation.jl:927; #32 ╎ ╎ 189 …logging/logging.jl:632; with_logger ╎ ╎ ╎ 189 …logging/logging.jl:522; with_logstate(f::Base.Precompilatio… ╎ ╎ ╎ 189 …precompilation.jl:933; (::Base.Precompilation.var"#33#73"{… ╎ ╎ ╎ 189 @Base/loading.jl:3038; compilecache ╎ ╎ ╎ 189 @Base/loading.jl:3082; compilecache(pkg::Base.PkgId, path… ╎ ╎ ╎ 189 @Base/process.jl:556; success(x::Base.Process) ╎ ╎ ╎ ╎ 189 @Base/process.jl:687; wait ╎ ╎ ╎ ╎ 189 @Base/process.jl:694; wait(x::Base.Process, syncd::Boo… ╎ ╎ ╎ ╎ 189 …se/condition.jl:125; wait ╎ ╎ ╎ ╎ 189 …se/condition.jl:130; wait(c::Base.GenericCondition{… ╎ ╎ ╎ ╎ 189 @Base/task.jl:1021; wait() 188╎ ╎ ╎ ╎ ╎ 189 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinke… ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 1 signal (10): User defined signal 1 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 task_done_hook at ./task.jl:694 jfptr_task_done_hook_66535.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] jl_finish_task at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/task.c:319 start_task at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/task.c:1213 unknown function (ip: (nil)) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.11/Profile/src/Profile.jl:1240 Overhead ╎ [+additional indent] Count File:Line; Function ========================================================= Thread 1 Task 0x000074a20bdbd2d0 Total snapshots: 537. Utilization: 0% ╎537 @Base/task.jl:694; task_done_hook(t::Task) ╎ 537 @Base/task.jl:1021; wait() 536╎ 537 @Base/task.jl:1012; poptask(W::Base.IntrusiveLinkedListSynchronized{T… [7] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/precompile.jl:37 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:152 epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 poptask at ./task.jl:1012 poptask at ./task.jl:1012 wait at ./task.jl:1021 wait at ./task.jl:1021 #wait#731 at ./condition.jl:130 #wait#731 at ./condition.jl:130 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 wait at ./condition.jl:125 [inlined] _trywait at ./asyncevent.jl:145 #816 at ./asyncevent.jl:311 profile_printing_listener at ./Base.jl:577 jfptr_YY.816_67134.1 at /opt/julia/lib/julia/sys.so (unknown line) #1190 at ./Base.jl:617 jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] start_task at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/task.c:1202 unknown function (ip: (nil)) Allocations: 12906290 (Pool: 12904781; Big: 1509); GC: 14 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") jfptr_YY.1190_76003.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] start_task at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/task.c:1202 unknown function (ip: (nil)) Allocations: 13128313 (Pool: 13127658; Big: 655); GC: 12 error at ./error.jl:35 val already in a list atexit hook threw an error: ErrorException("schedule: Task not runnable") #schedule#761 at ./task.jl:884 error at ./error.jl:35 schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 #schedule#761 at ./task.jl:884 jfptr_uv_writecb_task_66985.1 at /opt/julia/lib/julia/sys.so (unknown line) schedule at ./task.jl:876 [inlined] uv_writecb_task at ./stream.jl:1200 jfptr_uv_writecb_task_66985.1 at /opt/julia/lib/julia/sys.so (unknown line) jlcapi_uv_writecb_task_67448.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 jlcapi_uv_writecb_task_67448.1 at /opt/julia/lib/julia/sys.so (unknown line) uv__write_callbacks at /workspace/srcdir/libuv/src/unix/stream.c:926 uv__stream_io at /workspace/srcdir/libuv/src/unix/stream.c:1227 uv__run_pending at /workspace/srcdir/libuv/src/unix/core.c:824 uv_run at /workspace/srcdir/libuv/src/unix/core.c:420 ijl_task_get_next at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/scheduler.c:522 poptask at ./task.jl:1012 wait at ./task.jl:1021 poptask at ./task.jl:1012 uv_write at ./stream.jl:1081 wait at ./task.jl:1021 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 unknown function (ip: 0x770b0c394546) showerror at ./errorshow.jl:152 unknown function (ip: 0x770b0c3945d6) uv_write at ./stream.jl:1081 _atexit at ./initdefs.jl:462 unsafe_write at ./stream.jl:1154 write at ./strings/io.jl:248 [inlined] print at ./strings/io.jl:250 unknown function (ip: 0x74a216c07ef6) showerror at ./errorshow.jl:152 unknown function (ip: 0x74a216c55326) jfptr__atexit_69498.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] ijl_atexit_hook at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/init.c:271 _atexit at ./initdefs.jl:462 jl_exit_thread0_cb at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/signals-unix.c:517 jfptr__atexit_69498.1 at /opt/julia/lib/julia/sys.so (unknown line) jl_apply at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/julia.h:2157 [inlined] ijl_atexit_hook at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/init.c:271 jl_exit_thread0_cb at /cache/build/tester-amdci5-12/julialang/julia-release-1-dot-11/src/signals-unix.c:517 PkgEval terminated after 2752.48s: test duration exceeded the time limit