Package evaluation of ReactionMechanismSimulator on Julia 1.13.0-DEV.427 (855bef3b06*) started at 2025-04-24T08:30:12.950 ################################################################################ # Set-up # Set-up completed after 0.24s ################################################################################ # Installation # Installing ReactionMechanismSimulator... Resolving package versions... Updating `~/.julia/environments/v1.13/Project.toml` [c2d78dd2] + ReactionMechanismSimulator v1.0.1 Updating `~/.julia/environments/v1.13/Manifest.toml` ⌅ [47edcb42] + ADTypes v0.1.6 ⌅ [c3fe647b] + AbstractAlgebra v0.27.10 [621f4979] + AbstractFFTs v1.5.0 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 ⌅ [79e6a3ab] + Adapt v3.7.2 [66dad0bd] + AliasTables v1.1.3 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 ⌃ [4fba245c] + ArrayInterface v7.7.1 [30b0a656] + ArrayInterfaceCore v0.1.29 ⌅ [a9b6321e] + Atomix v0.1.0 ⌅ [15f4f7f2] + AutoHashEquals v0.2.0 ⌃ [13072b0f] + AxisAlgorithms v1.0.1 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [e2ed5e7c] + Bijections v0.1.9 [62783981] + BitTwiddlingConvenienceFunctions v0.1.6 ⌅ [fa961155] + CEnum v0.4.2 [2a0fbf3d] + CPUSummary v0.2.6 [00ebfdb7] + CSTParser v3.4.3 [336ed68f] + CSV v0.10.15 [49dc2e85] + Calculus v0.5.2 [7057c7e9] + Cassette v0.3.14 [aafaddc9] + CatIndices v0.2.2 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [fb6a15b2] + CloseOpenIntervals v0.1.13 [944b1d66] + CodecZlib v0.7.8 ⌅ [3da002f7] + ColorTypes v0.10.12 ⌅ [c3611d14] + ColorVectorSpace v0.8.7 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.2 ⌅ [a80b9123] + CommonMark v0.8.16 [38540f10] + CommonSolve v0.2.4 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [b152e2b5] + CompositeTypes v0.1.4 [a33af91c] + CompositionsBase v0.1.2 [ed09eef8] + ComputationalResources v0.3.2 [2569d6c7] + ConcreteStructs v0.2.3 [992eb4ea] + CondaPkg v0.2.28 ⌅ [187b0558] + ConstructionBase v1.5.6 [150eb455] + CoordinateTransformations v0.6.4 [adafc99b] + CpuId v0.3.1 [a8cc5b0e] + Crayons v4.1.1 [dc8bdbbb] + CustomUnitRanges v1.0.2 [9a962f9c] + DataAPI v1.16.0 [a93c6f00] + DataFrames v1.7.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [244e2a9f] + DefineSingletons v0.1.2 ⌃ [2b5f629d] + DiffEqBase v6.130.0 ⌅ [459566f4] + DiffEqCallbacks v2.35.0 [77a26b50] + DiffEqNoiseProcess v5.24.1 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 ⌅ [5b8099bc] + DomainSets v0.5.14 ⌅ [7c1d4256] + DynamicPolynomials v0.4.6 [da5c29d0] + EllipsisNotation v1.8.0 [4e289a0a] + EnumX v1.0.5 ⌅ [7da242da] + Enzyme v0.11.20 ⌅ [f151be2c] + EnzymeCore v0.6.6 [d4d017d3] + ExponentialUtilities v1.27.0 [e2ba6199] + ExprTools v0.1.10 [4f61f5a4] + FFTViews v0.3.2 [7a1cc6ca] + FFTW v1.8.1 ⌅ [7034ab61] + FastBroadcast v0.2.8 [9aa1b823] + FastClosures v0.3.2 ⌅ [442a2c76] + FastGaussQuadrature v0.5.1 [29a986be] + FastLapackInterface v2.0.4 [5789e2e9] + FileIO v1.17.0 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [59287772] + Formatting v0.4.3 ⌅ [f6369f11] + ForwardDiff v0.10.38 [069b7b12] + FunctionWrappers v1.1.3 [77dc65aa] + FunctionWrappersWrappers v0.1.3 ⌅ [d9f16b24] + Functors v0.4.12 ⌃ [0c68f7d7] + GPUArrays v9.1.0 ⌅ [46192b85] + GPUArraysCore v0.1.5 ⌅ [61eb1bfa] + GPUCompiler v0.25.0 [c145ed77] + GenericSchur v0.5.5 [c27321d9] + Glob v1.3.1 [a2bd30eb] + Graphics v1.1.3 [86223c79] + Graphs v1.12.1 ⌅ [0b43b601] + Groebner v0.2.11 ⌅ [d5909c97] + GroupsCore v0.4.2 [3e5b6fbb] + HostCPUFeatures v0.1.17 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.14 [bbac6d45] + IdentityRanges v0.3.1 [615f187c] + IfElse v0.1.1 ⌃ [2803e5a7] + ImageAxes v0.6.9 ⌃ [f332f351] + ImageContrastAdjustment v0.3.7 ⌅ [a09fc81d] + ImageCore v0.8.22 ⌃ [51556ac3] + ImageDistances v0.2.13 ⌅ [6a3955dd] + ImageFiltering v0.6.21 ⌅ [82e4d734] + ImageIO v0.4.1 ⌃ [6218d12a] + ImageMagick v1.2.1 ⌃ [bc367c6b] + ImageMetadata v0.9.5 ⌅ [787d08f9] + ImageMorphology v0.2.11 ⌅ [2996bd0c] + ImageQualityIndexes v0.2.2 ⌃ [4e3cecfd] + ImageShow v0.3.1 ⌅ [02fcd773] + ImageTransformations v0.8.13 ⌅ [916415d5] + Images v0.24.1 [40713840] + IncompleteLU v0.2.1 ⌅ [9b13fd28] + IndirectArrays v0.5.1 [d25df0c9] + Inflate v0.1.5 [22cec73e] + InitialValues v0.3.1 [842dd82b] + InlineStrings v1.4.3 [18e54dd8] + IntegerMathUtils v0.1.2 ⌅ [a98d9a8b] + Interpolations v0.13.6 [8197267c] + IntervalSets v0.7.10 [3587e190] + InverseFunctions v0.1.17 [41ab1584] + InvertedIndices v1.3.1 ⌅ [92d709cd] + IrrationalConstants v0.1.1 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [0f8b85d8] + JSON3 v1.14.2 ⌅ [98e50ef6] + JuliaFormatter v1.0.62 ⌃ [ccbc3e58] + JumpProcesses v9.10.1 ⌅ [ef3ab10e] + KLU v0.4.1 ⌃ [63c18a36] + KernelAbstractions v0.9.18 ⌅ [ba0b0d4f] + Krylov v0.9.10 ⌅ [929cbde3] + LLVM v6.6.3 [b964fa9f] + LaTeXStrings v1.4.0 ⌃ [2ee39098] + LabelledArrays v1.15.1 ⌅ [984bce1d] + LambertW v0.4.6 ⌅ [23fbe1c1] + Latexify v0.15.21 [10f19ff3] + LayoutPointers v0.1.17 [2d8b4e74] + LevyArea v1.0.0 [d3d80556] + LineSearches v7.3.0 ⌅ [7ed4a6bd] + LinearSolve v2.14.1 [2ab3a3ac] + LogExpFunctions v0.3.29 [bdcacae8] + LoopVectorization v0.12.172 ⌅ [2fda8390] + LsqFit v0.12.1 [1914dd2f] + MacroTools v0.5.16 [d125e4d3] + ManualMemory v0.1.8 [dbb5928d] + MappedArrays v0.4.2 ⌅ [e9d8d322] + Metatheory v1.3.5 [128add7d] + MicroCollections v0.2.0 [0b3b1443] + MicroMamba v0.1.14 [e1d29d7a] + Missings v1.2.0 ⌅ [961ee093] + ModelingToolkit v8.46.1 [e94cdb99] + MosaicViews v0.3.4 [46d2c3a1] + MuladdMacro v0.2.4 ⌅ [102ac46a] + MultivariatePolynomials v0.4.7 [d8a4904e] + MutableArithmetics v1.6.4 ⌃ [d41bc354] + NLSolversBase v7.8.3 [2774e3e8] + NLsolve v4.5.1 ⌃ [872c559c] + NNlib v0.9.28 [77ba4419] + NaNMath v1.1.3 ⌃ [f09324ee] + Netpbm v1.0.1 ⌅ [8913a72c] + NonlinearSolve v1.10.1 [d8793406] + ObjectFile v0.4.4 [6fe1bfb0] + OffsetArrays v1.17.0 ⌃ [429524aa] + Optim v1.11.0 [87e2bd06] + OptimBase v2.0.2 ⌃ [3bd65402] + Optimisers v0.4.0 [bac558e1] + OrderedCollections v1.8.0 ⌃ [1dea7af3] + OrdinaryDiffEq v6.58.2 [90014a1f] + PDMats v0.11.34 ⌅ [f57f5aa1] + PNGFiles v0.3.17 [65ce6f38] + PackageExtensionCompat v1.0.2 [5432bcbf] + PaddedViews v0.5.12 [d96e819e] + Parameters v0.12.3 [69de0a69] + Parsers v2.8.2 [fa939f87] + Pidfile v1.3.0 [e409e4f3] + PoissonRandom v0.4.4 [f517fe37] + Polyester v0.7.16 [1d0040c9] + PolyesterWeave v0.2.2 [2dfb63ee] + PooledArrays v1.4.3 [85a6dd25] + PositiveFactorizations v0.2.4 ⌃ [d236fae5] + PreallocationTools v0.4.24 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [08abe8d2] + PrettyTables v2.4.0 [27ebfcd6] + Primes v0.5.7 [43287f4e] + PtrArrays v1.3.0 [6099a3de] + PythonCall v0.9.24 [274fc56d] + PythonPlot v1.0.6 ⌃ [1fd47b50] + QuadGK v2.10.1 ⌃ [dca85d43] + QuartzImageIO v0.7.3 [94ee1d12] + Quaternions v0.7.6 [74087812] + Random123 v1.7.0 [fb686558] + RandomExtensions v0.4.4 [e6cf234a] + RandomNumbers v1.6.0 [b3c3ace0] + RangeArrays v0.3.2 [c84ed2f1] + Ratios v0.4.5 [c2d78dd2] + ReactionMechanismSimulator v1.0.1 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 ⌅ [731186ca] + RecursiveArrayTools v2.38.10 [f2c3362d] + RecursiveFactorization v0.2.23 [189a3867] + Reexport v1.2.2 [42d2dcc6] + Referenceables v0.1.3 [ae029012] + Requires v1.3.1 [ae5879a3] + ResettableStacks v1.1.1 [37e2e3b7] + ReverseDiff v1.16.1 [79098fc4] + Rmath v0.8.0 [6038ab10] + Rotations v1.7.1 [7e49a35a] + RuntimeGeneratedFunctions v0.5.14 [94e857df] + SIMDTypes v0.1.0 [476501e8] + SLEEFPirates v0.6.43 ⌅ [0bca4576] + SciMLBase v1.98.1 [e9a6253c] + SciMLNLSolve v0.1.9 [c0aeaf25] + SciMLOperators v0.3.13 ⌃ [1ed8b502] + SciMLSensitivity v7.38.0 [6c6a2e73] + Scratch v1.2.1 [91c51154] + SentinelArrays v1.4.8 [efcf1570] + Setfield v1.1.2 ⌅ [727e6d20] + SimpleNonlinearSolve v0.1.23 [699a6c99] + SimpleTraits v0.9.4 [ce78b400] + SimpleUnPack v1.1.0 ⌃ [102930c3] + SmoothingSplines v0.3.1 [66db9d55] + SnoopPrecompile v1.0.3 [a2af1166] + SortingAlgorithms v1.2.1 ⌃ [47a9eef4] + SparseDiffTools v2.4.1 [dc90abb0] + SparseInverseSubset v0.1.2 [e56a9233] + Sparspak v0.3.11 ⌅ [276daf66] + SpecialFunctions v1.8.8 [171d559e] + SplittablesBase v0.1.15 [cae243ae] + StackViews v0.1.1 ⌅ [aedffcd0] + Static v0.8.10 [0d7ed370] + StaticArrayInterface v1.8.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 ⌅ [2913bbd2] + StatsBase v0.33.21 [4c63d2b9] + StatsFuns v1.4.0 ⌃ [789caeaf] + StochasticDiffEq v6.62.0 [7792a7ef] + StrideArraysCore v0.5.7 [69024149] + StringEncodings v0.3.7 [892a3eda] + StringManipulation v0.4.1 ⌃ [09ab397b] + StructArrays v0.6.18 [53d494c1] + StructIO v0.3.1 [856f2bd8] + StructTypes v1.11.0 ⌃ [c3572dad] + Sundials v4.20.1 ⌅ [2efcf032] + SymbolicIndexingInterface v0.2.2 ⌅ [d1185830] + SymbolicUtils v0.19.11 ⌅ [0c5d862f] + Symbolics v4.14.0 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 ⌅ [8ea1fca8] + TermInterface v0.2.3 [8290d209] + ThreadingUtilities v0.5.3 [ac1d9e8a] + ThreadsX v0.1.12 ⌅ [06e1c1a7] + TiledIteration v0.3.1 [a759f4b9] + TimerOutputs v0.5.28 [0796e94c] + Tokenize v0.5.29 [9f7883ad] + Tracker v0.2.38 [3bb67fe8] + TranscodingStreams v0.11.3 [28d57a85] + Transducers v0.4.84 [a2a6695c] + TreeViews v0.3.0 [d5829a12] + TriangularSolve v0.2.1 [410a4b4d] + Tricks v0.1.10 [781d530d] + TruncatedStacktraces v1.4.0 [3a884ed6] + UnPack v1.0.2 [1986cc42] + Unitful v1.22.0 ⌅ [013be700] + UnsafeAtomics v0.2.1 ⌅ [d80eeb9a] + UnsafeAtomicsLLVM v0.1.5 [e17b2a0c] + UnsafePointers v1.0.0 [3d5dd08c] + VectorizationBase v0.21.71 [81def892] + VersionParsing v1.3.0 [19fa3120] + VertexSafeGraphs v0.2.0 [ea10d353] + WeakRefStrings v1.4.2 ⌅ [efce3f68] + WoodburyMatrices v0.5.6 [76eceee3] + WorkerUtilities v1.6.1 [ddb6d928] + YAML v0.4.13 ⌅ [e88e6eb3] + Zygote v0.6.76 [700de1a5] + ZygoteRules v0.2.7 ⌅ [7cc45869] + Enzyme_jll v0.0.102+0 [f5851436] + FFTW_jll v3.3.11+0 [61579ee1] + Ghostscript_jll v9.55.0+4 ⌅ [c73af94c] + ImageMagick_jll v6.9.13+0 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [aacddb02] + JpegTurbo_jll v3.1.1+0 [88015f11] + LERC_jll v4.0.1+0 ⌅ [dad2f222] + LLVMExtra_jll v0.0.29+0 [94ce4f54] + Libiconv_jll v1.18.0+0 [89763e89] + Libtiff_jll v4.7.1+0 [d3a379c0] + LittleCMS_jll v2.16.0+0 [856f044c] + MKL_jll v2025.0.1+1 [643b3616] + OpenJpeg_jll v2.5.4+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 ⌅ [fb77eaff] + Sundials_jll v5.2.3+0 [ffd25f8a] + XZ_jll v5.8.1+0 [3161d3a3] + Zstd_jll v1.5.7+1 [b53b4c65] + libpng_jll v1.6.47+0 [f8abcde7] + micromamba_jll v1.5.8+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [4d7b5844] + pixi_jll v0.41.3+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 10.7s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 9301.7 ms ✓ StructArrays 1811.2 ms ✓ BangBang 2401.4 ms ✓ Optimisers 6016.1 ms ✓ PNGFiles 3216.1 ms ? DomainSets 18896.9 ms ✓ VectorizationBase 6090.3 ms ✓ Enzyme_jll 7968.7 ms ✓ ImageShow 16894.9 ms ? SciMLBase 7745.6 ms ✓ Latexify → DataFramesExt 5157.9 ms ✓ FastGaussQuadrature 1959.6 ms ✓ LevyArea 11241.7 ms ✓ QuartzImageIO 10519.0 ms ✓ Netpbm 22722.0 ms ✓ ImageTransformations 9507.3 ms ✓ UnsafeAtomicsLLVM 9824.7 ms ✓ GPUArrays 10136.3 ms ? GPUCompiler 1740.5 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 14227.2 ms ✓ Distributions 5076.3 ms ✓ PreallocationTools 5144.5 ms ✓ NLSolversBase 32236.5 ms ✓ SparseDiffTools 35474.3 ms ✓ ImageDistances 153820.9 ms ✓ PythonPlot 12710.7 ms ✓ ImageMagick 54823.9 ms ✓ ReverseDiff 76786.0 ms ✓ ImageFiltering 940.4 ms ✓ StructArrays → StructArraysAdaptExt 1394.6 ms ✓ StructArrays → StructArraysSparseArraysExt 1800.0 ms ✓ StructArrays → StructArraysStaticArraysExt 939.6 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1321.9 ms ✓ Accessors → StructArraysExt 1939.0 ms ✓ BangBang → BangBangStaticArraysExt 9841.8 ms ✓ BangBang → BangBangDataFramesExt 1360.4 ms ✓ BangBang → BangBangChainRulesCoreExt 1339.1 ms ✓ BangBang → BangBangStructArraysExt 1476.8 ms ✓ BangBang → BangBangTablesExt 2353.9 ms ✓ MicroCollections 6870.8 ms ✓ SLEEFPirates 23371.0 ms ✓ ImageContrastAdjustment 17302.3 ms ✓ KernelAbstractions 27431.4 ms ? Enzyme 13150.1 ms ✓ Distributions → DistributionsTestExt 7101.8 ms ✓ Distributions → DistributionsChainRulesCoreExt 46834.8 ms ? DiffEqBase 12743.2 ms ✓ LabelledArrays 13321.5 ms ✓ LineSearches 3354.0 ms ✓ OptimBase 51397.6 ms ✓ PreallocationTools → PreallocationToolsReverseDiffExt 29784.8 ms ✓ ImageQualityIndexes 12248.8 ms ✓ ChainRules 8491.1 ms ✓ Transducers 50093.4 ms ✓ LoopVectorization 9714.4 ms ✓ KernelAbstractions → EnzymeExt 20976.7 ms ✓ NNlib 21677.7 ms ? Enzyme → EnzymeSpecialFunctionsExt 13723.3 ms ? DiffEqBase → DiffEqBaseUnitfulExt 13584.5 ms ? DiffEqBase → DiffEqBaseReverseDiffExt 77337.1 ms ? DiffEqBase → DiffEqBaseDistributionsExt 16028.5 ms ? SimpleNonlinearSolve 75562.5 ms ? Latexify → ParameterizedFunctionsExt 13788.3 ms ? Sundials 13814.8 ms ? JumpProcesses 14398.3 ms ✓ NLsolve 12781.5 ms ✓ Optim 24495.8 ms ✓ LsqFit 121661.7 ms ✓ Images ✗ Zygote 2701.3 ms ✓ Transducers → TransducersReferenceablesExt 8514.2 ms ✓ Transducers → TransducersDataFramesExt 2679.3 ms ✓ Transducers → TransducersAdaptExt 107887.4 ms ✓ LoopVectorization → SpecialFunctionsExt 7001.5 ms ✓ LoopVectorization → ForwardDiffExt 26337.4 ms ✓ TriangularSolve 9777.0 ms ✓ NNlib → NNlibEnzymeCoreExt 8684.1 ms ✓ NNlib → NNlibSpecialFunctionsExt 8884.5 ms ✓ NNlib → NNlibFFTWExt 48880.2 ms ✓ NNlib → NNlibForwardDiffExt 44941.4 ms ? SimpleNonlinearSolve → SimpleNonlinearSolveNNlibExt 14820.7 ms ? JumpProcesses → JumpProcessFastBroadcastExt 12212.5 ms ? DiffEqCallbacks 66967.8 ms ? SciMLNLSolve 36499.2 ms ? DiffEqNoiseProcess ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt ✗ RecursiveArrayTools → RecursiveArrayToolsZygoteExt ✗ SciMLBase → ZygoteExt ✗ SparseDiffTools → SparseDiffToolsZygoteExt 10290.6 ms ? DiffEqBase → DiffEqBaseZygoteExt 4341.4 ms ✓ ThreadsX 86090.1 ms ✓ RecursiveFactorization 88171.5 ms ✓ Tracker 11369.9 ms ? DiffEqNoiseProcess → DiffEqNoiseProcessReverseDiffExt 6725.3 ms ✓ Metatheory 113743.1 ms ? LinearSolve 6497.2 ms ✓ Tracker → TrackerPDMatsExt 6493.6 ms ✓ ArrayInterface → ArrayInterfaceTrackerExt 6718.1 ms ✓ RecursiveArrayTools → RecursiveArrayToolsTrackerExt 9844.2 ms ? DiffEqBase → DiffEqBaseTrackerExt ✗ Zygote → ZygoteTrackerExt 42657.6 ms ✓ SymbolicUtils 10534.3 ms ? LinearSolve → LinearSolveKernelAbstractionsExt 10484.9 ms ? LinearSolve → LinearSolveEnzymeExt 10887.7 ms ? LinearSolve → LinearSolveRecursiveArrayToolsExt 6374.5 ms ? Symbolics 12735.1 ms ? NonlinearSolve 9844.6 ms ? ModelingToolkit 10795.1 ms ? OrdinaryDiffEq 9898.3 ms ? StochasticDiffEq 9912.9 ms ? SciMLSensitivity ✗ ReactionMechanismSimulator 73 dependencies successfully precompiled in 2619 seconds. 321 already precompiled. 31 dependencies failed but may be precompilable after restarting julia 51 dependencies had output during precompilation: ┌ KernelAbstractions → EnzymeExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ Enzyme │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/U36Ed/src/jlgen.jl:35. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ LinearSolve │ WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. │ Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. │ WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. │ Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. │ WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. │ Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. │ WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. │ Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. │ WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. │ Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. │ WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. │ Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. │ WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. │ WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Bool end`. │ Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. │ WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. │ Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. │ WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. │ Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. │ WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. │ Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. │ WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. │ Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ GPUArrays │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ LinearSolve → LinearSolveEnzymeExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ StochasticDiffEq │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NNlib → NNlibForwardDiffExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ Latexify → ParameterizedFunctionsExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Sundials │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ SciMLBase │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ SciMLSensitivity │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ OrdinaryDiffEq │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqBase │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ JumpProcesses │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NNlib → NNlibEnzymeCoreExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ LinearSolve → LinearSolveRecursiveArrayToolsExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ NNlib → NNlibFFTWExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ Symbolics │ WARNING: Constructor for type "Number" was extended in `DomainSets` without explicit qualification or import. │ NOTE: Assumed "Number" refers to `Base.Number`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Number end`. │ Hint: To silence the warning, qualify `Number` as `Base.Number` in the method signature or explicitly `import Base: Number`. │ WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Tracker → TrackerPDMatsExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ JumpProcesses → JumpProcessFastBroadcastExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqNoiseProcess → DiffEqNoiseProcessReverseDiffExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ RecursiveArrayTools → RecursiveArrayToolsTrackerExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ NonlinearSolve │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ SciMLNLSolve │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ ImageFiltering │ WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. │ NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Alg end`. │ Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. └ ┌ Tracker │ ┌ Warning: LLVM.jl has not been tested with LLVM versions newer than 16. │ └ @ LLVM.API ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:44 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ LoopVectorization → SpecialFunctionsExt │ WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. │ Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. │ WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. │ Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. │ WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. │ Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. │ WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. │ Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. │ WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. │ Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. │ WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. │ Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. │ WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. │ WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Bool end`. │ Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. │ WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. │ Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. │ WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. │ Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. │ WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. │ Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. │ WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. │ Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. └ ┌ GPUCompiler │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/U36Ed/src/jlgen.jl:35. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ ImageContrastAdjustment │ WARNING: Constructor for type "IndexStyle" was extended in `ImageTransformations` without explicit qualification or import. │ NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`. │ Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` in the method signature or explicitly `import Base: IndexStyle`. └ ┌ NNlib → NNlibSpecialFunctionsExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ DomainSets │ WARNING: Constructor for type "Number" was extended in `DomainSets` without explicit qualification or import. │ NOTE: Assumed "Number" refers to `Base.Number`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Number end`. │ Hint: To silence the warning, qualify `Number` as `Base.Number` in the method signature or explicitly `import Base: Number`. │ WARNING: Method definition isapprox(IntervalSets.AbstractInterval{T} where T, IntervalSets.AbstractInterval{T} where T) in module IntervalSets at /home/pkgeval/.julia/packages/IntervalSets/kyCuf/src/IntervalSets.jl:296 overwritten in module DomainSets at /home/pkgeval/.julia/packages/DomainSets/aafhp/src/domains/interval.jl:52. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ LinearSolve → LinearSolveKernelAbstractionsExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ Enzyme → EnzymeSpecialFunctionsExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 │ WARNING: Constructor for type "MethodError" was extended in `GPUCompiler` without explicit qualification or import. │ NOTE: Assumed "MethodError" refers to `Base.MethodError`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function MethodError end`. │ Hint: To silence the warning, qualify `MethodError` as `Base.MethodError` in the method signature or explicitly `import Base: MethodError`. │ WARNING: Method definition (::Type{MethodError})(Any, Any) in module Core at boot.jl:446 overwritten in module GPUCompiler at /home/pkgeval/.julia/packages/GPUCompiler/U36Ed/src/jlgen.jl:35. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqBase → DiffEqBaseUnitfulExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ UnsafeAtomicsLLVM │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ NNlib │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ DiffEqCallbacks │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ VectorizationBase │ WARNING: Constructor for type "Int16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int16" refers to `Base.Int16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int16 end`. │ Hint: To silence the warning, qualify `Int16` as `Base.Int16` in the method signature or explicitly `import Base: Int16`. │ WARNING: Constructor for type "Int64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int64" refers to `Base.Int64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int64 end`. │ Hint: To silence the warning, qualify `Int64` as `Base.Int64` in the method signature or explicitly `import Base: Int64`. │ WARNING: Constructor for type "Int32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int32" refers to `Base.Int32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int32 end`. │ Hint: To silence the warning, qualify `Int32` as `Base.Int32` in the method signature or explicitly `import Base: Int32`. │ WARNING: Constructor for type "UInt8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt8" refers to `Base.UInt8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt8 end`. │ Hint: To silence the warning, qualify `UInt8` as `Base.UInt8` in the method signature or explicitly `import Base: UInt8`. │ WARNING: Constructor for type "UInt16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt16" refers to `Base.UInt16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt16 end`. │ Hint: To silence the warning, qualify `UInt16` as `Base.UInt16` in the method signature or explicitly `import Base: UInt16`. │ WARNING: Constructor for type "Float32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float32" refers to `Base.Float32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float32 end`. │ Hint: To silence the warning, qualify `Float32` as `Base.Float32` in the method signature or explicitly `import Base: Float32`. │ WARNING: Constructor for type "UInt64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt64" refers to `Base.UInt64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt64 end`. │ Hint: To silence the warning, qualify `UInt64` as `Base.UInt64` in the method signature or explicitly `import Base: UInt64`. │ WARNING: Constructor for type "Bool" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Bool" refers to `Base.Bool`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Bool end`. │ Hint: To silence the warning, qualify `Bool` as `Base.Bool` in the method signature or explicitly `import Base: Bool`. │ WARNING: Constructor for type "Int8" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Int8" refers to `Base.Int8`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Int8 end`. │ Hint: To silence the warning, qualify `Int8` as `Base.Int8` in the method signature or explicitly `import Base: Int8`. │ WARNING: Constructor for type "Float64" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float64" refers to `Base.Float64`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float64 end`. │ Hint: To silence the warning, qualify `Float64` as `Base.Float64` in the method signature or explicitly `import Base: Float64`. │ WARNING: Constructor for type "UInt32" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "UInt32" refers to `Base.UInt32`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UInt32 end`. │ Hint: To silence the warning, qualify `UInt32` as `Base.UInt32` in the method signature or explicitly `import Base: UInt32`. │ WARNING: Constructor for type "Float16" was extended in `VectorizationBase` without explicit qualification or import. │ NOTE: Assumed "Float16" refers to `Base.Float16`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Float16 end`. │ Hint: To silence the warning, qualify `Float16` as `Base.Float16` in the method signature or explicitly `import Base: Float16`. └ ┌ DiffEqBase → DiffEqBaseDistributionsExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqBase → DiffEqBaseZygoteExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ KernelAbstractions │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ Images │ WARNING: Constructor for type "IndexStyle" was extended in `ImageTransformations` without explicit qualification or import. │ NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`. │ Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` in the method signature or explicitly `import Base: IndexStyle`. │ WARNING: Constructor for type "Alg" was extended in `ImageFiltering` without explicit qualification or import. │ NOTE: Assumed "Alg" refers to `Algorithm.Alg`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Alg end`. │ Hint: To silence the warning, qualify `Alg` as `Algorithm.Alg` in the method signature or explicitly `import Algorithm: Alg`. └ ┌ SimpleNonlinearSolve → SimpleNonlinearSolveNNlibExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqNoiseProcess │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ ImageTransformations │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/y4lLj/src/Interpolations.jl:454 declares type variable N but does not use it. │ WARNING: method definition for checkbounds at /home/pkgeval/.julia/packages/Interpolations/y4lLj/src/Interpolations.jl:457 declares type variable N but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/y4lLj/src/gridded/gridded.jl:37 declares type variable pad but does not use it. │ WARNING: method definition for GriddedInterpolation at /home/pkgeval/.julia/packages/Interpolations/y4lLj/src/gridded/gridded.jl:60 declares type variable pad but does not use it. │ WARNING: method definition for interpolate! at /home/pkgeval/.julia/packages/Interpolations/y4lLj/src/deprecations.jl:30 declares type variable TWeights but does not use it. │ WARNING: Constructor for type "IndexStyle" was extended in `ImageTransformations` without explicit qualification or import. │ NOTE: Assumed "IndexStyle" refers to `Base.IndexStyle`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function IndexStyle end`. │ Hint: To silence the warning, qualify `IndexStyle` as `Base.IndexStyle` in the method signature or explicitly `import Base: IndexStyle`. └ ┌ ModelingToolkit │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ DiffEqBase → DiffEqBaseTrackerExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ ArrayInterface → ArrayInterfaceTrackerExt │ ┌ Error: LLVM extensions library unavailable for your platform: │ │ x86_64-linux-gnu-libgfortran5-cxx11-llvm_version+19.asserts-julia_version+1.13.0 │ │ LLVM.jl will not be functional. │ │ │ │ If you are using a custom version of LLVM, try building a │ │ custom version of LLVMExtra_jll using `deps/build_local.jl` │ └ @ LLVM ~/.julia/packages/LLVM/bzSzE/src/LLVM.jl:103 └ ┌ PythonPlot │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml │ CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonPlot/oS8x4/CondaPkg.toml │ CondaPkg Resolving changes │ + matplotlib │ + openssl │ + python │ CondaPkg Initialising pixi │ │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ │ init │ │ --format pixi │ └ /home/pkgeval/.julia/environments/v1.13/.CondaPkg │ ✔ Created /home/pkgeval/.julia/environments/v1.13/.CondaPkg/pixi.toml │ CondaPkg Wrote /home/pkgeval/.julia/environments/v1.13/.CondaPkg/pixi.toml │ │ [dependencies] │ │ openssl = ">=3, <3.1" │ │ matplotlib = ">=1" │ │ │ │ [dependencies.python] │ │ channel = "conda-forge" │ │ build = "*cpython*" │ │ version = ">=3.8,<4" │ │ │ │ [project] │ │ name = ".CondaPkg" │ │ platforms = ["linux-64"] │ │ channels = ["conda-forge"] │ │ channel-priority = "strict" │ └ description = "automatically generated by CondaPkg.jl" │ CondaPkg Installing packages │ │ /home/pkgeval/.julia/artifacts/cefba4912c2b400756d043a2563ef77a0088866b/bin/pixi │ │ install │ └ --manifest-path /home/pkgeval/.julia/environments/v1.13/.CondaPkg/pixi.toml │ ✔ The default environment has been installed. └ ┌ DiffEqBase → DiffEqBaseReverseDiffExt │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ┌ SimpleNonlinearSolve │ WARNING: Method definition islinear(Any) in module SciMLOperators at /home/pkgeval/.julia/packages/SciMLOperators/2UPBq/src/interface.jl:311 overwritten in module SciMLBase at /home/pkgeval/.julia/packages/SciMLBase/szsYq/src/operators/operators.jl:7. │ ERROR: Method overwriting is not permitted during Module precompilation. Use `__precompile__(false)` to opt-out of precompilation. └ ERROR: LoadError: The following 1 direct dependency failed to precompile: ReactionMechanismSimulator Failed to precompile ReactionMechanismSimulator [c2d78dd2-25c4-5b79-bebc-be6c69dd440f] to "/home/pkgeval/.julia/compiled/v1.13/ReactionMechanismSimulator/jl_Djq8V5" (ProcessExited(1)). CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonPlot/oS8x4/CondaPkg.toml CondaPkg Creating environment │ /home/pkgeval/.julia/artifacts/7973f2c7725e2d0eef7a95159454c4145f0945a2/bin/micromamba │ -r /home/pkgeval/.julia/scratchspaces/0b3b1443-0f03-428d-bdfb-f27f9c1191ea/root │ create │ -y │ -p /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env │ --override-channels │ matplotlib[version='>=1'] │ openssl[version='>=3, <3.1'] │ python[version='>=3.8,<4',channel='conda-forge',build='*cpython*'] └ -c conda-forge Transaction Prefix: /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env Updating specs: - matplotlib[version='>=1'] - openssl[version='>=3, <3.1'] - conda-forge::python[version='>=3.8,<4',build=*cpython*] Package Version Build Channel Size ────────────────────────────────────────────────────────────────────────────────────────── Install: ────────────────────────────────────────────────────────────────────────────────────────── + ld_impl_linux-64 2.43 h712a8e2_4 conda-forge 671kB + _libgcc_mutex 0.1 conda_forge conda-forge 3kB + libgomp 14.2.0 h767d61c_2 conda-forge 460kB + _openmp_mutex 4.5 2_gnu conda-forge 24kB + libgcc 14.2.0 h767d61c_2 conda-forge 848kB + libwebp-base 1.5.0 h851e524_0 conda-forge 430kB + xorg-libxdmcp 1.1.5 hb9d3cd8_0 conda-forge 20kB + xorg-libxau 1.0.12 hb9d3cd8_0 conda-forge 15kB + pthread-stubs 0.4 hb9d3cd8_1002 conda-forge 8kB + xorg-renderproto 0.11.1 hb9d3cd8_1003 conda-forge 12kB + libbrotlicommon 1.1.0 hb9d3cd8_2 conda-forge 69kB + libgettextpo 0.23.1 h5888daf_0 conda-forge 167kB + gettext-tools 0.23.1 h5888daf_0 conda-forge 3MB + libgfortran5 14.2.0 hf1ad2bd_2 conda-forge 1MB + libopus 1.5.2 hd0c01bc_0 conda-forge 312kB + libiconv 1.18 h4ce23a2_1 conda-forge 713kB + libltdl 2.4.3a h5888daf_0 conda-forge 38kB + gstreamer-orc 0.4.41 h17648ed_0 conda-forge 287kB + xorg-xf86vidmodeproto 2.3.1 hb9d3cd8_1005 conda-forge 26kB + libexpat 2.7.0 h5888daf_0 conda-forge 74kB + xorg-xproto 7.0.31 hb9d3cd8_1008 conda-forge 73kB + xorg-kbproto 1.0.7 hb9d3cd8_1003 conda-forge 30kB + xorg-xextproto 7.3.0 hb9d3cd8_1004 conda-forge 31kB + xorg-libice 1.1.2 hb9d3cd8_0 conda-forge 59kB + libstdcxx 14.2.0 h8f9b012_2 conda-forge 4MB + liblzma 5.8.1 hb9d3cd8_0 conda-forge 113kB + ncurses 6.5 h2d0b736_3 conda-forge 892kB + libzlib 1.3.1 hb9d3cd8_2 conda-forge 61kB + libgcc-ng 14.2.0 h69a702a_2 conda-forge 54kB + libffi 3.4.6 h2dba641_1 conda-forge 57kB + libbrotlienc 1.1.0 hb9d3cd8_2 conda-forge 282kB + libbrotlidec 1.1.0 hb9d3cd8_2 conda-forge 33kB + libgettextpo-devel 0.23.1 h5888daf_0 conda-forge 37kB + libgfortran 14.2.0 h69a702a_2 conda-forge 54kB + libtool 2.5.4 h5888daf_0 conda-forge 415kB + expat 2.7.0 h5888daf_0 conda-forge 140kB + libgpg-error 1.54 hbd13f7d_0 conda-forge 279kB + lerc 4.0.0 h0aef613_1 conda-forge 264kB + libasprintf 0.23.1 h8e693c7_0 conda-forge 43kB + mpg123 1.32.9 hc50e24c_0 conda-forge 491kB + nspr 4.36 h5888daf_0 conda-forge 230kB + pixman 0.44.2 h29eaf8c_0 conda-forge 381kB + libstdcxx-ng 14.2.0 h4852527_2 conda-forge 54kB + xz-tools 5.8.1 hb9d3cd8_0 conda-forge 96kB + xz-gpl-tools 5.8.1 hbcc6ac9_0 conda-forge 34kB + liblzma-devel 5.8.1 hb9d3cd8_0 conda-forge 441kB + libedit 3.1.20250104 pl5321h7949ede_0 conda-forge 135kB + readline 8.2 h8c095d6_2 conda-forge 282kB + libpng 1.6.47 h943b412_0 conda-forge 289kB + zstd 1.5.7 hb8e6e7a_2 conda-forge 568kB + libsqlite 3.49.1 hee588c1_2 conda-forge 919kB + attr 2.5.1 h166bdaf_1 conda-forge 71kB + libdeflate 1.18 h0b41bf4_0 conda-forge 65kB + libogg 1.3.5 h4ab18f5_0 conda-forge 206kB + lame 3.100 h166bdaf_1003 conda-forge 508kB + xkeyboard-config 2.38 h0b41bf4_0 conda-forge 882kB + libudev1 253 h0b41bf4_0 conda-forge 119kB + libjpeg-turbo 2.1.5.1 hd590300_1 conda-forge 496kB + libxcb 1.13 h7f98852_1004 conda-forge 400kB + keyutils 1.6.1 h166bdaf_0 conda-forge 118kB + alsa-lib 1.2.8 h166bdaf_0 conda-forge 592kB + tk 8.6.13 noxft_h4845f30_101 conda-forge 3MB + libuuid 2.38.1 h0b41bf4_0 conda-forge 34kB + libnsl 2.0.1 hd590300_0 conda-forge 33kB + bzip2 1.0.8 h4bc722e_7 conda-forge 253kB + brotli-bin 1.1.0 hb9d3cd8_2 conda-forge 19kB + libgfortran-ng 14.2.0 h69a702a_2 conda-forge 54kB + libopenblas 0.3.29 pthreads_h94d23a6_0 conda-forge 6MB + libgcrypt-lib 1.11.0 hb9d3cd8_2 conda-forge 586kB + libasprintf-devel 0.23.1 h8e693c7_0 conda-forge 34kB + libdb 6.2.32 h9c3ff4c_0 conda-forge 24MB + lz4-c 1.9.4 hcb278e6_0 conda-forge 143kB + qhull 2020.2 h434a139_5 conda-forge 553kB + graphite2 1.3.13 h59595ed_1003 conda-forge 97kB + icu 70.1 h27087fc_0 conda-forge 14MB + xz 5.8.1 hbcc6ac9_0 conda-forge 24kB + libfreetype6 2.13.3 h48d6fc4_1 conda-forge 380kB + nss 3.110 h159eef7_0 conda-forge 2MB + libcap 2.66 ha37c62d_0 conda-forge 100kB + libvorbis 1.3.7 h9c3ff4c_0 conda-forge 286kB + xcb-util-wm 0.4.1 h516909a_0 conda-forge 56kB + xcb-util-keysyms 0.4.0 h516909a_0 conda-forge 12kB + xcb-util 0.4.0 h516909a_0 conda-forge 20kB + xcb-util-renderutil 0.3.9 h166bdaf_0 conda-forge 16kB + xorg-libx11 1.8.4 h0b41bf4_0 conda-forge 830kB + xorg-libsm 1.2.6 he73a12e_0 conda-forge 28kB + pcre2 10.44 hba22ea6_2 conda-forge 952kB + brotli 1.1.0 hb9d3cd8_2 conda-forge 19kB + fftw 3.3.10 nompi_hf1063bd_110 conda-forge 2MB + libblas 3.9.0 31_h59b9bed_openblas conda-forge 17kB + libgcrypt-tools 1.11.0 hb9d3cd8_2 conda-forge 33kB + libgcrypt-devel 1.11.0 hb9d3cd8_2 conda-forge 106kB + gettext 0.23.1 h5888daf_0 conda-forge 484kB + jack 1.9.22 h11f4161_0 conda-forge 464kB + libtiff 4.5.1 h8b53f26_1 conda-forge 417kB + libxml2 2.10.3 hca2bb57_4 conda-forge 714kB + libfreetype 2.13.3 ha770c72_1 conda-forge 8kB + xcb-util-image 0.4.0 h166bdaf_0 conda-forge 24kB + xorg-libxext 1.3.4 h0b41bf4_2 conda-forge 50kB + xorg-libxrender 0.9.10 h7f98852_1003 conda-forge 33kB + libglib 2.84.1 h2ff4ddf_0 conda-forge 4MB + libcblas 3.9.0 31_he106b2a_openblas conda-forge 17kB + liblapack 3.9.0 31_h7ac8fdf_openblas conda-forge 17kB + libgcrypt 1.11.0 ha770c72_2 conda-forge 6kB + libflac 1.4.3 h59595ed_0 conda-forge 394kB + openjpeg 2.5.0 hfec8fc6_2 conda-forge 352kB + lcms2 2.15 haa2dc70_1 conda-forge 242kB + libllvm15 15.0.7 hadd5161_1 conda-forge 33MB + libxkbcommon 1.5.0 h79f4944_1 conda-forge 563kB + freetype 2.13.3 ha770c72_1 conda-forge 172kB + glib-tools 2.84.1 h4833e2c_0 conda-forge 116kB + dbus 1.13.6 h5008d03_3 conda-forge 619kB + libsystemd0 252 h2a991cd_0 conda-forge 393kB + libsndfile 1.2.2 hc60ed4a_1 conda-forge 354kB + libclang13 15.0.7 default_h5d6823c_5 conda-forge 10MB + fontconfig 2.15.0 h7e30c49_1 conda-forge 266kB + libclang 15.0.7 default_h127d8a8_5 conda-forge 133kB + tzdata 2025b h78e105d_0 conda-forge 123kB + ca-certificates 2025.1.31 hbd8a1cb_1 conda-forge 159kB + python_abi 3.11 7_cp311 conda-forge 7kB + font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge 397kB + font-ttf-inconsolata 3.000 h77eed37_0 conda-forge 97kB + font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge 701kB + font-ttf-ubuntu 0.83 h77eed37_3 conda-forge 2MB + fonts-conda-forge 1 0 conda-forge 4kB + fonts-conda-ecosystem 1 0 conda-forge 4kB + openssl 3.0.16 h7b32b05_0 conda-forge 3MB + cairo 1.16.0 ha61ee94_1012 conda-forge 2MB + pulseaudio 16.1 ha8d29e2_1 conda-forge 2MB + mysql-common 8.0.32 ha901b37_0 conda-forge 744kB + krb5 1.20.1 h81ceb04_0 conda-forge 1MB + libevent 2.1.10 h28343ad_4 conda-forge 1MB + python 3.11.0 he550d4f_1_cpython conda-forge 31MB + harfbuzz 6.0.0 h8e241bc_0 conda-forge 1MB + mysql-libs 8.0.32 hd7da12d_0 conda-forge 2MB + libcups 2.3.3 h36d4200_3 conda-forge 5MB + libpq 15.2 hb675445_0 conda-forge 2MB + wheel 0.45.1 pyhd8ed1ab_1 conda-forge 63kB + setuptools 79.0.0 pyhff2d567_0 conda-forge 788kB + pip 25.0.1 pyh8b19718_0 conda-forge 1MB + six 1.17.0 pyhd8ed1ab_0 conda-forge 16kB + munkres 1.1.4 pyh9f0ad1d_0 conda-forge 12kB + pyparsing 3.2.3 pyhd8ed1ab_1 conda-forge 96kB + cycler 0.12.1 pyhd8ed1ab_1 conda-forge 13kB + certifi 2025.1.31 pyhd8ed1ab_0 conda-forge 163kB + tomli 2.2.1 pyhd8ed1ab_1 conda-forge 19kB + ply 3.11 pyhd8ed1ab_3 conda-forge 49kB + packaging 25.0 pyh29332c3_1 conda-forge 62kB + toml 0.10.2 pyhd8ed1ab_1 conda-forge 22kB + python-dateutil 2.9.0.post0 pyhff2d567_1 conda-forge 223kB + unicodedata2 16.0.0 py311h9ecbd09_0 conda-forge 405kB + pillow 9.5.0 py311h573f0d3_0 conda-forge 47MB + numpy 2.2.5 py311h5d046bc_0 conda-forge 9MB + kiwisolver 1.4.7 py311hd18a35c_0 conda-forge 72kB + tornado 6.4.2 py311h9ecbd09_0 conda-forge 856kB + glib 2.84.1 h07242d1_0 conda-forge 607kB + sip 6.7.12 py311hb755f60_0 conda-forge 585kB + fonttools 4.57.0 py311h2dc5d0c_0 conda-forge 3MB + contourpy 1.3.2 py311hd18a35c_0 conda-forge 278kB + gstreamer 1.22.0 h25f0c4b_2 conda-forge 2MB + pyqt5-sip 12.12.2 py311hb755f60_5 conda-forge 85kB + matplotlib-base 3.9.1 py311h74b4f7c_2 conda-forge 8MB + gst-plugins-base 1.22.0 h4243ec0_2 conda-forge 3MB + qt-main 5.15.8 h67dfc38_7 conda-forge 52MB + pyqt 5.15.9 py311hf0fb5b6_5 conda-forge 5MB + matplotlib 3.9.1 py311h38be061_1 conda-forge 9kB Summary: Install: 166 packages Total download: 320MB ────────────────────────────────────────────────────────────────────────────────────────── Transaction starting Linking ld_impl_linux-64-2.43-h712a8e2_4 Linking _libgcc_mutex-0.1-conda_forge Linking libgomp-14.2.0-h767d61c_2 Linking _openmp_mutex-4.5-2_gnu Linking libgcc-14.2.0-h767d61c_2 Linking libwebp-base-1.5.0-h851e524_0 Linking xorg-libxdmcp-1.1.5-hb9d3cd8_0 Linking xorg-libxau-1.0.12-hb9d3cd8_0 Linking pthread-stubs-0.4-hb9d3cd8_1002 Linking xorg-renderproto-0.11.1-hb9d3cd8_1003 Linking libbrotlicommon-1.1.0-hb9d3cd8_2 Linking libgettextpo-0.23.1-h5888daf_0 Linking gettext-tools-0.23.1-h5888daf_0 Linking libgfortran5-14.2.0-hf1ad2bd_2 Linking libopus-1.5.2-hd0c01bc_0 Linking libiconv-1.18-h4ce23a2_1 Linking libltdl-2.4.3a-h5888daf_0 Linking gstreamer-orc-0.4.41-h17648ed_0 Linking xorg-xf86vidmodeproto-2.3.1-hb9d3cd8_1005 Linking libexpat-2.7.0-h5888daf_0 Linking xorg-xproto-7.0.31-hb9d3cd8_1008 Linking xorg-kbproto-1.0.7-hb9d3cd8_1003 Linking xorg-xextproto-7.3.0-hb9d3cd8_1004 Linking xorg-libice-1.1.2-hb9d3cd8_0 Linking libstdcxx-14.2.0-h8f9b012_2 Linking liblzma-5.8.1-hb9d3cd8_0 Linking ncurses-6.5-h2d0b736_3 Linking libzlib-1.3.1-hb9d3cd8_2 Linking libgcc-ng-14.2.0-h69a702a_2 Linking libffi-3.4.6-h2dba641_1 Linking libbrotlienc-1.1.0-hb9d3cd8_2 Linking libbrotlidec-1.1.0-hb9d3cd8_2 Linking libgettextpo-devel-0.23.1-h5888daf_0 Linking libgfortran-14.2.0-h69a702a_2 Linking libtool-2.5.4-h5888daf_0 Linking expat-2.7.0-h5888daf_0 Linking libgpg-error-1.54-hbd13f7d_0 Linking lerc-4.0.0-h0aef613_1 Linking libasprintf-0.23.1-h8e693c7_0 Linking mpg123-1.32.9-hc50e24c_0 Linking nspr-4.36-h5888daf_0 Linking pixman-0.44.2-h29eaf8c_0 Linking libstdcxx-ng-14.2.0-h4852527_2 Linking xz-tools-5.8.1-hb9d3cd8_0 Linking xz-gpl-tools-5.8.1-hbcc6ac9_0 Linking liblzma-devel-5.8.1-hb9d3cd8_0 Linking libedit-3.1.20250104-pl5321h7949ede_0 Linking readline-8.2-h8c095d6_2 Linking libpng-1.6.47-h943b412_0 Linking zstd-1.5.7-hb8e6e7a_2 Linking libsqlite-3.49.1-hee588c1_2 Linking attr-2.5.1-h166bdaf_1 Linking libdeflate-1.18-h0b41bf4_0 Linking libogg-1.3.5-h4ab18f5_0 Linking lame-3.100-h166bdaf_1003 Linking xkeyboard-config-2.38-h0b41bf4_0 Linking libudev1-253-h0b41bf4_0 Linking libjpeg-turbo-2.1.5.1-hd590300_1 Linking libxcb-1.13-h7f98852_1004 Linking keyutils-1.6.1-h166bdaf_0 Linking alsa-lib-1.2.8-h166bdaf_0 Linking tk-8.6.13-noxft_h4845f30_101 Linking libuuid-2.38.1-h0b41bf4_0 Linking libnsl-2.0.1-hd590300_0 Linking bzip2-1.0.8-h4bc722e_7 Linking brotli-bin-1.1.0-hb9d3cd8_2 Linking libgfortran-ng-14.2.0-h69a702a_2 Linking libopenblas-0.3.29-pthreads_h94d23a6_0 Linking libgcrypt-lib-1.11.0-hb9d3cd8_2 Linking libasprintf-devel-0.23.1-h8e693c7_0 Linking libdb-6.2.32-h9c3ff4c_0 Linking lz4-c-1.9.4-hcb278e6_0 Linking qhull-2020.2-h434a139_5 Linking graphite2-1.3.13-h59595ed_1003 Linking icu-70.1-h27087fc_0 Linking xz-5.8.1-hbcc6ac9_0 Linking libfreetype6-2.13.3-h48d6fc4_1 Linking nss-3.110-h159eef7_0 Linking libcap-2.66-ha37c62d_0 Linking libvorbis-1.3.7-h9c3ff4c_0 Linking xcb-util-wm-0.4.1-h516909a_0 Linking xcb-util-keysyms-0.4.0-h516909a_0 Linking xcb-util-0.4.0-h516909a_0 Linking xcb-util-renderutil-0.3.9-h166bdaf_0 Linking xorg-libx11-1.8.4-h0b41bf4_0 Linking xorg-libsm-1.2.6-he73a12e_0 Linking pcre2-10.44-hba22ea6_2 Linking brotli-1.1.0-hb9d3cd8_2 Linking fftw-3.3.10-nompi_hf1063bd_110 Linking libblas-3.9.0-31_h59b9bed_openblas Linking libgcrypt-tools-1.11.0-hb9d3cd8_2 Linking libgcrypt-devel-1.11.0-hb9d3cd8_2 Linking gettext-0.23.1-h5888daf_0 Linking jack-1.9.22-h11f4161_0 Linking libtiff-4.5.1-h8b53f26_1 Linking libxml2-2.10.3-hca2bb57_4 Linking libfreetype-2.13.3-ha770c72_1 Linking xcb-util-image-0.4.0-h166bdaf_0 Linking xorg-libxext-1.3.4-h0b41bf4_2 Linking xorg-libxrender-0.9.10-h7f98852_1003 Linking libglib-2.84.1-h2ff4ddf_0 Linking libcblas-3.9.0-31_he106b2a_openblas Linking liblapack-3.9.0-31_h7ac8fdf_openblas Linking libgcrypt-1.11.0-ha770c72_2 Linking libflac-1.4.3-h59595ed_0 Linking openjpeg-2.5.0-hfec8fc6_2 Linking lcms2-2.15-haa2dc70_1 Linking libllvm15-15.0.7-hadd5161_1 Linking libxkbcommon-1.5.0-h79f4944_1 Linking freetype-2.13.3-ha770c72_1 Linking glib-tools-2.84.1-h4833e2c_0 Linking dbus-1.13.6-h5008d03_3 Linking libsystemd0-252-h2a991cd_0 Linking libsndfile-1.2.2-hc60ed4a_1 Linking libclang13-15.0.7-default_h5d6823c_5 Linking fontconfig-2.15.0-h7e30c49_1 Linking libclang-15.0.7-default_h127d8a8_5 Linking tzdata-2025b-h78e105d_0 Linking ca-certificates-2025.1.31-hbd8a1cb_1 Linking python_abi-3.11-7_cp311 Linking font-ttf-dejavu-sans-mono-2.37-hab24e00_0 Linking font-ttf-inconsolata-3.000-h77eed37_0 Linking font-ttf-source-code-pro-2.038-h77eed37_0 Linking font-ttf-ubuntu-0.83-h77eed37_3 Linking fonts-conda-forge-1-0 Linking fonts-conda-ecosystem-1-0 Linking openssl-3.0.16-h7b32b05_0 Linking cairo-1.16.0-ha61ee94_1012 Linking pulseaudio-16.1-ha8d29e2_1 Linking mysql-common-8.0.32-ha901b37_0 Linking krb5-1.20.1-h81ceb04_0 Linking libevent-2.1.10-h28343ad_4 Linking python-3.11.0-he550d4f_1_cpython Linking harfbuzz-6.0.0-h8e241bc_0 Linking mysql-libs-8.0.32-hd7da12d_0 Linking libcups-2.3.3-h36d4200_3 Linking libpq-15.2-hb675445_0 Linking wheel-0.45.1-pyhd8ed1ab_1 Linking setuptools-79.0.0-pyhff2d567_0 Linking pip-25.0.1-pyh8b19718_0 Linking six-1.17.0-pyhd8ed1ab_0 Linking munkres-1.1.4-pyh9f0ad1d_0 Linking pyparsing-3.2.3-pyhd8ed1ab_1 Linking cycler-0.12.1-pyhd8ed1ab_1 Linking certifi-2025.1.31-pyhd8ed1ab_0 Linking tomli-2.2.1-pyhd8ed1ab_1 Linking ply-3.11-pyhd8ed1ab_3 Linking packaging-25.0-pyh29332c3_1 Linking toml-0.10.2-pyhd8ed1ab_1 Linking python-dateutil-2.9.0.post0-pyhff2d567_1 Linking unicodedata2-16.0.0-py311h9ecbd09_0 Linking pillow-9.5.0-py311h573f0d3_0 Linking numpy-2.2.5-py311h5d046bc_0 Linking kiwisolver-1.4.7-py311hd18a35c_0 Linking tornado-6.4.2-py311h9ecbd09_0 Linking glib-2.84.1-h07242d1_0 Linking sip-6.7.12-py311hb755f60_0 Linking fonttools-4.57.0-py311h2dc5d0c_0 Linking contourpy-1.3.2-py311hd18a35c_0 Linking gstreamer-1.22.0-h25f0c4b_2 Linking pyqt5-sip-12.12.2-py311hb755f60_5 Linking matplotlib-base-3.9.1-py311h74b4f7c_2 Linking gst-plugins-base-1.22.0-h4243ec0_2 Linking qt-main-5.15.8-h67dfc38_7 Linking pyqt-5.15.9-py311hf0fb5b6_5 Linking matplotlib-3.9.1-py311h38be061_1 Transaction finished To activate this environment, use: micromamba activate /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env Or to execute a single command in this environment, use: micromamba run -p /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env mycommand [ Info: missing rmg and rmgmolecule installing rmgmolecule... [ Info: python version was not in 3.7-3.9 changing python version CondaPkg Found dependencies: /home/pkgeval/.julia/environments/v1.13/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonCall/WMWY0/CondaPkg.toml CondaPkg Found dependencies: /home/pkgeval/.julia/packages/PythonPlot/oS8x4/CondaPkg.toml CondaPkg Resolving changes ~ matplotlib + pydot ~ python + rdkit + rmgmolecule CondaPkg Installing packages │ /home/pkgeval/.julia/artifacts/7973f2c7725e2d0eef7a95159454c4145f0945a2/bin/micromamba │ -r /home/pkgeval/.julia/scratchspaces/0b3b1443-0f03-428d-bdfb-f27f9c1191ea/root │ install │ -y │ -p /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env │ --override-channels │ matplotlib[version='>=1',channel='conda-forge'] │ openssl[version='>=3, <3.1'] │ pydot[version='>=2.0',channel='conda-forge'] │ python[version='>=3.8,<4, 3.9',channel='conda-forge',build='*cpython*'] │ rdkit[version='*',channel='conda-forge'] │ rmgmolecule[version='>=0.3.0',channel='mjohnson541'] └ -c conda-forge conda-forge/linux-64 Using cache conda-forge/noarch Using cache error libmamba Could not solve for environment specs The following packages are incompatible ├─ openssl >=3,<3.1 is requested and can be installed; └─ python >=3.8,<4,3.9 *cpython* is not installable because it requires └─ openssl >=1.1.1h,<1.1.2a , which conflicts with any installable versions previously reported. critical libmamba Could not solve for environment specs ERROR: LoadError: failed process: Process(`/home/pkgeval/.julia/artifacts/7973f2c7725e2d0eef7a95159454c4145f0945a2/bin/micromamba -r /home/pkgeval/.julia/scratchspaces/0b3b1443-0f03-428d-bdfb-f27f9c1191ea/root install -y -p /home/pkgeval/.julia/environments/v1.13/.CondaPkg/env --override-channels "matplotlib[version='>=1',channel='conda-forge']" "openssl[version='>=3, <3.1']" "pydot[version='>=2.0',channel='conda-forge']" "python[version='>=3.8,<4, 3.9',channel='conda-forge',build='*cpython*']" "rdkit[version='*',channel='conda-forge']" "rmgmolecule[version='>=0.3.0',channel='mjohnson541']" -c conda-forge`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] _run(io::IO, cmd::Cmd, args::Any; flags::Any) @ CondaPkg ~/.julia/packages/CondaPkg/6RB8q/src/resolve.jl:679 [5] _resolve_conda_install(io::Any, conda_env::Any, specs::Any, channels::Any; create::Any) @ CondaPkg ~/.julia/packages/CondaPkg/6RB8q/src/resolve.jl:558 [6] _resolve_conda_install(io::Any, conda_env::Any, specs::Any, channels::Any) @ CondaPkg ~/.julia/packages/CondaPkg/6RB8q/src/resolve.jl:528 [7] resolve(; force::Bool, io::IO, interactive::Bool, dry_run::Bool) @ CondaPkg ~/.julia/packages/CondaPkg/6RB8q/src/resolve.jl:874 [8] resolve() @ CondaPkg ~/.julia/packages/CondaPkg/6RB8q/src/resolve.jl:682 [9] top-level scope @ ~/.julia/packages/ReactionMechanismSimulator/EureN/src/ReactionMechanismSimulator.jl:21 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [12] top-level scope @ stdin:5 [13] eval(m::Module, e::Any) @ Core ./boot.jl:489 [14] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [15] include_string @ ./loading.jl:2834 [inlined] [16] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [17] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/ReactionMechanismSimulator/EureN/src/ReactionMechanismSimulator.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2544.51s ################################################################################ # Loading # Loading ReactionMechanismSimulator... Precompiling packages... 2768.2 ms ? DomainSets 4928.5 ms ? SciMLBase 4828.7 ms ✓ LoopVectorization → SpecialFunctionsExt 7477.6 ms ? GPUCompiler 9032.8 ms ✓ SparseDiffTools 4917.1 ms ✓ LoopVectorization → ForwardDiffExt ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 2060 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x746699f76f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x000074668ed2c970 Total snapshots: 451. Utilization: 0% ╎451 @Base/task.jl:1150 wait_forever() 450╎ 451 @Base/task.jl:1216 wait() Thread 2 (default) Task 0x000074668fdfc100 Total snapshots: 451. Utilization: 0% ╎451 @Base/task.jl:1150 wait_forever() 450╎ 451 @Base/task.jl:1216 wait() ✗ Zygote ====================================================================================== Information request received. A stacktrace will print followed by a 1.0 second profile ====================================================================================== cmd: /opt/julia/bin/julia 1 running 0 of 2 signal (10): User defined signal 1 unknown function (ip: 0x73a33c61ff14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) ============================================================== Profile collected. A report will print at the next yield point ============================================================== ┌ Warning: There were no samples collected in one or more groups. │ This may be due to idle threads, or you may need to run your │ program longer (perhaps by running it multiple times), │ or adjust the delay between samples with `Profile.init()`. └ @ Profile /opt/julia/share/julia/stdlib/v1.13/Profile/src/Profile.jl:1362 Overhead ╎ [+additional indent] Count File:Line Function ========================================================= Thread 1 (interactive) Task 0x000073a30fba6770 Total snapshots: 451. Utilization: 0% ╎451 @Base/task.jl:1150 wait_forever() 450╎ 451 @Base/task.jl:1216 wait() Thread 2 (default) Task 0x000073a3325fc100 Total snapshots: 451. Utilization: 0% ╎451 @Base/task.jl:1150 wait_forever() 450╎ 451 @Base/task.jl:1216 wait() [2060] signal 15: Terminated in expression starting at none:1 unknown function (ip: 0x746699f76f14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 [1] signal 15: Terminated in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 unknown function (ip: 0x73a33c61ff14) at /lib/x86_64-linux-gnu/libc.so.6 pthread_cond_wait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv_cond_wait at /workspace/srcdir/libuv/src/unix/thread.c:822 ijl_task_get_next at /source/src/scheduler.c:520 wait at ./task.jl:1216 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) epoll_pwait at /lib/x86_64-linux-gnu/libc.so.6 (unknown line) uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 uv__io_poll at /workspace/srcdir/libuv/src/unix/linux.c:1404 uv_run at /workspace/srcdir/libuv/src/unix/core.c:430 ijl_task_get_next at /source/src/scheduler.c:454 wait at ./task.jl:1216 wait at ./task.jl:1216 wait_forever at ./task.jl:1150 wait_forever at ./task.jl:1150 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jfptr_wait_forever_30085.1 at /opt/julia/lib/julia/sys.so (unknown line) _jl_invoke at /source/src/gf.c:3498 [inlined] ijl_apply_generic at /source/src/gf.c:3698 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 11944175 (Pool: 11943903; Big: 272); GC: 25 jl_apply at /source/src/julia.h:2353 [inlined] start_task at /source/src/task.c:1249 unknown function (ip: (nil)) at (unknown file) Allocations: 20125285 (Pool: 20124722; Big: 563); GC: 15 ✗ ReverseDiff PkgEval terminated after 2754.18s: test duration exceeded the time limit