Package evaluation of MLJGaussianProcesses on Julia 1.13.0-DEV.427 (855bef3b06*) started at 2025-04-24T00:37:40.398 ################################################################################ # Set-up # Set-up completed after 0.25s ################################################################################ # Installation # Installing MLJGaussianProcesses... Resolving package versions... Installed GPUArraysCore ─────────────── v0.2.0 Installed RealDot ───────────────────── v0.1.0 Installed IrrationalConstants ───────── v0.2.4 Installed Adapt ─────────────────────── v4.3.0 Installed DiffRules ─────────────────── v1.15.1 Installed ScientificTypesBase ───────── v3.0.0 Installed Functors ──────────────────── v0.5.2 Installed IRTools ───────────────────── v0.4.14 Installed Rmath ─────────────────────── v0.8.0 Installed PtrArrays ─────────────────── v1.3.0 Installed HypergeometricFunctions ───── v0.3.28 Installed TensorCore ────────────────── v0.1.1 Installed StatsFuns ─────────────────── v1.4.0 Installed Preferences ───────────────── v1.4.3 Installed IterTools ─────────────────── v1.10.0 Installed TableTraits ───────────────── v1.0.1 Installed PositiveFactorizations ────── v0.2.4 Installed DiffResults ───────────────── v1.1.0 Installed MLJModelInterface ─────────── v1.11.1 Installed ADTypes ───────────────────── v1.14.0 Installed PDMats ────────────────────── v0.11.34 Installed DataAPI ───────────────────── v1.16.0 Installed Tables ────────────────────── v1.12.0 Installed HashArrayMappedTries ──────── v0.2.0 Installed SpecialFunctions ──────────── v2.5.1 Installed StatisticalTraits ─────────── v3.4.0 Installed Setfield ──────────────────── v1.1.2 Installed RecipesBase ───────────────── v1.3.4 Installed Optim ─────────────────────── v1.12.0 Installed StaticArraysCore ──────────── v1.4.3 Installed JLLWrappers ───────────────── v1.7.0 Installed AbstractFFTs ──────────────── v1.5.0 Installed StaticArrays ──────────────── v1.9.13 Installed Zygote ────────────────────── v0.6.76 Installed NaNMath ───────────────────── v1.1.3 Installed DataValueInterfaces ───────── v1.0.0 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed ConstructionBase ──────────── v1.5.8 Installed StructArrays ──────────────── v0.7.1 Installed PrecompileTools ───────────── v1.3.2 Installed LLVMExtra_jll ─────────────── v0.0.35+0 Installed EnumX ─────────────────────── v1.0.5 Installed ScopedValues ──────────────── v1.3.0 Installed OrderedCollections ────────── v1.8.0 Installed ChainRulesCore ────────────── v1.25.1 Installed CEnum ─────────────────────── v0.5.0 Installed NLSolversBase ─────────────── v7.9.1 Installed ArrayInterface ────────────── v7.18.0 Installed MLJGaussianProcesses ──────── v0.1.0 Installed ForwardDiff ───────────────── v1.0.1 Installed GPUArrays ─────────────────── v11.2.2 Installed QuadGK ────────────────────── v2.11.2 Installed FillArrays ────────────────── v1.13.0 Installed Reexport ──────────────────── v1.2.2 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed LineSearches ──────────────── v7.3.0 Installed AbstractGPs ───────────────── v0.5.24 Installed Statistics ────────────────── v1.11.1 Installed KernelFunctions ───────────── v0.10.65 Installed DataStructures ────────────── v0.18.22 Installed CommonSubexpressions ──────── v0.3.1 Installed Requires ──────────────────── v1.3.1 Installed ChainRules ────────────────── v1.72.3 Installed LogExpFunctions ───────────── v0.3.29 Installed KernelAbstractions ────────── v0.9.34 Installed StatsAPI ──────────────────── v1.7.0 Installed AliasTables ───────────────── v1.1.3 Installed Compat ────────────────────── v4.16.0 Installed MacroTools ────────────────── v0.5.16 Installed Distributions ─────────────── v0.25.119 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed UnPack ────────────────────── v1.0.2 Installed CompositionsBase ──────────── v0.1.2 Installed Parameters ────────────────── v0.12.3 Installed ZygoteRules ───────────────── v0.2.7 Installed UnsafeAtomics ─────────────── v0.3.0 Installed SparseInverseSubset ───────── v0.1.2 Installed ParameterHandling ─────────── v0.4.10 Installed InverseFunctions ──────────── v0.1.17 Installed Distances ─────────────────── v0.10.12 Installed Missings ──────────────────── v1.2.0 Installed SortingAlgorithms ─────────── v1.2.1 Installed Atomix ────────────────────── v1.1.1 Installed StatsBase ─────────────────── v0.34.4 Installed DocStringExtensions ───────── v0.9.4 Installed FiniteDiff ────────────────── v2.27.0 Installed DifferentiationInterface ──── v0.6.52 Installed LLVM ──────────────────────── v9.3.1 Installing 3 artifacts Installed artifact OpenSpecFun 194.9 KiB Installed artifact Rmath 121.9 KiB Installed artifact LLVMExtra 3.1 MiB Updating `~/.julia/environments/v1.13/Project.toml` [e2c51686] + MLJGaussianProcesses v0.1.0 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs v1.5.0 [99985d1d] + AbstractGPs v0.5.24 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [4fba245c] + ArrayInterface v7.18.0 [a9b6321e] + Atomix v1.1.1 [fa961155] + CEnum v0.5.0 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [187b0558] + ConstructionBase v1.5.8 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.52 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [f6369f11] + ForwardDiff v1.0.1 [d9f16b24] + Functors v0.5.2 [0c68f7d7] + GPUArrays v11.2.2 [46192b85] + GPUArraysCore v0.2.0 [076d061b] + HashArrayMappedTries v0.2.0 [34004b35] + HypergeometricFunctions v0.3.28 [7869d1d1] + IRTools v0.4.14 [3587e190] + InverseFunctions v0.1.17 [92d709cd] + IrrationalConstants v0.2.4 [c8e1da08] + IterTools v1.10.0 [82899510] + IteratorInterfaceExtensions v1.0.0 [692b3bcd] + JLLWrappers v1.7.0 [63c18a36] + KernelAbstractions v0.9.34 [ec8451be] + KernelFunctions v0.10.65 [929cbde3] + LLVM v9.3.1 [d3d80556] + LineSearches v7.3.0 [2ab3a3ac] + LogExpFunctions v0.3.29 [e2c51686] + MLJGaussianProcesses v0.1.0 [e80e1ace] + MLJModelInterface v1.11.1 [1914dd2f] + MacroTools v0.5.16 [e1d29d7a] + Missings v1.2.0 [d41bc354] + NLSolversBase v7.9.1 [77ba4419] + NaNMath v1.1.3 [429524aa] + Optim v1.12.0 [bac558e1] + OrderedCollections v1.8.0 [90014a1f] + PDMats v0.11.34 ⌅ [2412ca09] + ParameterHandling v0.4.10 [d96e819e] + Parameters v0.12.3 [85a6dd25] + PositiveFactorizations v0.2.4 [aea7be01] + PrecompileTools v1.3.2 [21216c6a] + Preferences v1.4.3 [43287f4e] + PtrArrays v1.3.0 [1fd47b50] + QuadGK v2.11.2 [c1ae055f] + RealDot v0.1.0 [3cdcf5f2] + RecipesBase v1.3.4 [189a3867] + Reexport v1.2.2 [ae029012] + Requires v1.3.1 [79098fc4] + Rmath v0.8.0 [30f210dd] + ScientificTypesBase v3.0.0 [7e506255] + ScopedValues v1.3.0 [efcf1570] + Setfield v1.1.2 [a2af1166] + SortingAlgorithms v1.2.1 [dc90abb0] + SparseInverseSubset v0.1.2 [276daf66] + SpecialFunctions v2.5.1 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [64bff920] + StatisticalTraits v3.4.0 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.4.0 [09ab397b] + StructArrays v0.7.1 [3783bdb8] + TableTraits v1.0.1 [bd369af6] + Tables v1.12.0 [62fd8b95] + TensorCore v0.1.1 [3a884ed6] + UnPack v1.0.2 [013be700] + UnsafeAtomics v0.3.0 ⌅ [e88e6eb3] + Zygote v0.6.76 [700de1a5] + ZygoteRules v0.2.7 [dad2f222] + LLVMExtra_jll v0.0.35+0 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 14.76s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 1325.7 ms ✓ ScientificTypesBase 1101.9 ms ✓ AbstractFFTs 975.5 ms ✓ PositiveFactorizations 741.7 ms ✓ IteratorInterfaceExtensions 3727.9 ms ✓ UnsafeAtomics 923.2 ms ✓ TensorCore 851.8 ms ✓ StatsAPI 1287.3 ms ✓ ADTypes 807.1 ms ✓ CEnum 762.4 ms ✓ UnPack 4300.8 ms ✓ FillArrays 885.2 ms ✓ InverseFunctions 1110.9 ms ✓ Statistics 1090.4 ms ✓ IterTools 4319.7 ms ✓ MacroTools 1199.2 ms ✓ OrderedCollections 1067.2 ms ✓ Requires 704.8 ms ✓ DataValueInterfaces 804.2 ms ✓ EnumX 817.4 ms ✓ RealDot 725.1 ms ✓ Reexport 1057.8 ms ✓ DocStringExtensions 2203.3 ms ✓ IrrationalConstants 774.7 ms ✓ CompositionsBase 776.9 ms ✓ PtrArrays 880.1 ms ✓ HashArrayMappedTries 1001.5 ms ✓ NaNMath 1020.2 ms ✓ ConstructionBase 828.7 ms ✓ DataAPI 854.7 ms ✓ StaticArraysCore 1274.3 ms ✓ SuiteSparse 1203.4 ms ✓ Preferences 1138.5 ms ✓ Compat 913.1 ms ✓ StatisticalTraits 4003.5 ms ✓ AbstractFFTs → AbstractFFTsTestExt 796.6 ms ✓ TableTraits 1018.5 ms ✓ Atomix 1927.9 ms ✓ DifferentiationInterface 4796.8 ms ✓ FillArrays → FillArraysSparseArraysExt 1954.4 ms ✓ InverseFunctions → InverseFunctionsTestExt 954.6 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1448.5 ms ✓ Distances 1374.0 ms ✓ Statistics → SparseArraysExt 938.7 ms ✓ FillArrays → FillArraysStatisticsExt 1471.6 ms ✓ CommonSubexpressions 6244.6 ms ✓ IRTools 983.2 ms ✓ Parameters 915.1 ms ✓ Adapt 1437.7 ms ✓ LogExpFunctions 863.0 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 983.5 ms ✓ AliasTables 779.4 ms ✓ ScopedValues 838.0 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 851.6 ms ✓ ADTypes → ADTypesConstructionBaseExt 1024.3 ms ✓ Missings 900.8 ms ✓ DiffResults 1793.4 ms ✓ PDMats 1300.3 ms ✓ SparseInverseSubset 1143.0 ms ✓ JLLWrappers 950.9 ms ✓ PrecompileTools 906.9 ms ✓ Compat → CompatLinearAlgebraExt 3801.9 ms ✓ MLJModelInterface 1748.1 ms ✓ Tables 1314.0 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1328.4 ms ✓ Distances → DistancesSparseArraysExt 1290.7 ms ✓ Adapt → AdaptSparseArraysExt 1190.4 ms ✓ ArrayInterface 1127.2 ms ✓ GPUArraysCore 870.9 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 2974.4 ms ✓ Setfield 1439.1 ms ✓ FillArrays → FillArraysPDMatsExt 1379.6 ms ✓ Rmath_jll 6519.2 ms ✓ LLVMExtra_jll 1362.0 ms ✓ OpenSpecFun_jll 13988.2 ms ✓ StaticArrays 2819.0 ms ✓ RecipesBase 6358.7 ms ✓ DataStructures 2714.7 ms ✓ ChainRulesCore 1393.1 ms ✓ Functors 1635.7 ms ✓ StructArrays 1318.2 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 821.6 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 888.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 825.4 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 1739.4 ms ✓ Rmath 22144.2 ms ✓ LLVM 5424.7 ms ✓ SpecialFunctions 1585.7 ms ✓ StaticArrays → StaticArraysStatisticsExt 1637.0 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1588.7 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1578.5 ms ✓ Adapt → AdaptStaticArraysExt 2664.0 ms ✓ SortingAlgorithms 3727.7 ms ✓ QuadGK 1417.1 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2508.6 ms ✓ ZygoteRules 1013.6 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 983.8 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1021.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 1012.9 ms ✓ Distances → DistancesChainRulesCoreExt 3275.7 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 958.7 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1631.3 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 926.4 ms ✓ StructArrays → StructArraysAdaptExt 1431.1 ms ✓ StructArrays → StructArraysSparseArraysExt 1866.6 ms ✓ StructArrays → StructArraysStaticArraysExt 1036.0 ms ✓ StructArrays → StructArraysLinearAlgebraExt 1311.4 ms ✓ FiniteDiff 9449.4 ms ✓ UnsafeAtomics → UnsafeAtomicsLLVM 4327.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2561.4 ms ✓ HypergeometricFunctions 1334.6 ms ✓ DiffRules 9062.9 ms ✓ KernelAbstractions 7248.7 ms ✓ StatsBase 4956.6 ms ✓ ParameterHandling 12487.5 ms ✓ ChainRules 1319.9 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1585.5 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1042.1 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 3204.7 ms ✓ StatsFuns 10192.2 ms ✓ ForwardDiff 3387.3 ms ✓ KernelAbstractions → SparseArraysExt 2821.5 ms ✓ KernelAbstractions → LinearAlgebraExt 2971.3 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 12298.1 ms ✓ KernelFunctions 1745.2 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 1291.1 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3725.9 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 12044.3 ms ✓ Distributions 4190.1 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1718.4 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 16832.8 ms ✓ GPUArrays 4304.3 ms ✓ Distributions → DistributionsTestExt 4169.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 4414.6 ms ✓ NLSolversBase ✗ Zygote 8083.9 ms ✓ AbstractGPs 6673.2 ms ✓ LineSearches ✗ Zygote → ZygoteDistancesExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt 11006.0 ms ✓ Optim ✗ MLJGaussianProcesses 137 dependencies successfully precompiled in 524 seconds. 36 already precompiled. 1 dependency had output during precompilation: ┌ IRTools │ WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Inner. └ ERROR: LoadError: The following 1 direct dependency failed to precompile: MLJGaussianProcesses Failed to precompile MLJGaussianProcesses [e2c51686-8c13-4540-892e-18cf079a7e1a] to "/home/pkgeval/.julia/compiled/v1.13/MLJGaussianProcesses/jl_xoohAW" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] IncludeInto @ ./Base.jl:305 [inlined] [4] macro expansion @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined] [5] precompile() @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63 [6] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84 [7] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [8] include(mod::Module, _path::String) @ Base ./Base.jl:303 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [13] include_string @ ./loading.jl:2834 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_6fjcQ5" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:14 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 535.81s ################################################################################ # Loading # Loading MLJGaussianProcesses... Precompiling packages... ✗ Zygote ✗ Zygote → ZygoteDistancesExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt Info Given MLJGaussianProcesses was explicitly requested, output will be shown live  WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import.  NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions.  NOTE: This behavior may have differed in Julia versions prior to 1.12.  Hint: If you intended to create a new generic function of the same name, use `function Variable end`.  Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace:  [1] top-level scope  @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13  [2] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [3] IncludeInto  @ ./Base.jl:305 [inlined]  [4] macro expansion  @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined]  [5] precompile()  @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63  [6] top-level scope  @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84  [7] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [8] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2978  [10] top-level scope  @ stdin:5  [11] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [13] include_string  @ ./loading.jl:2834 [inlined]  [14] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [15] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_PQkX8V" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3265  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2651  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1279  [8] #invokelatest_gr#234  @ ./reflection.jl:1287 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1281 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3836  [11] maybe_cachefile_lock  @ ./loading.jl:3833 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2637  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2465  [14] macro expansion  @ ./loading.jl:2393 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2358  [17] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2334  [18] top-level scope  @ ~/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:14  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [24] include_string  @ ./loading.jl:2834 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [26] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:1 in expression starting at stdin:5 ✗ MLJGaussianProcesses 0 dependencies successfully precompiled in 150 seconds. 173 already precompiled. ERROR: The following 1 direct dependency failed to precompile: MLJGaussianProcesses Failed to precompile MLJGaussianProcesses [e2c51686-8c13-4540-892e-18cf079a7e1a] to "/home/pkgeval/.julia/compiled/v1.13/MLJGaussianProcesses/jl_T3u7GY" (ProcessExited(1)). WARNING: Constructor for type "Variable" was extended in `Zygote` without explicit qualification or import. NOTE: Assumed "Variable" refers to `IRTools.Variable`. This behavior is deprecated and may differ in future versions. NOTE: This behavior may have differed in Julia versions prior to 1.12. Hint: If you intended to create a new generic function of the same name, use `function Variable end`. Hint: To silence the warning, qualify `Variable` as `IRTools.Variable` in the method signature or explicitly `import IRTools: Variable`. WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Zygote. ERROR: LoadError: UndefVarError: `typesof` not defined in `Zygote` Suggestion: this global was defined as `InteractiveUtils.typesof` but not assigned a value. Stacktrace: [1] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 [2] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [3] IncludeInto @ ./Base.jl:305 [inlined] [4] macro expansion @ ~/.julia/packages/Requires/1eCOK/src/Requires.jl:40 [inlined] [5] precompile() @ Zygote ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:63 [6] top-level scope @ ~/.julia/packages/Zygote/1GK3J/src/Zygote.jl:84 [7] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [8] include(mod::Module, _path::String) @ Base ./Base.jl:303 [9] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [10] top-level scope @ stdin:5 [11] eval(m::Module, e::Any) @ Core ./boot.jl:489 [12] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [13] include_string @ ./loading.jl:2834 [inlined] [14] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [15] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/precompile.jl:13 in expression starting at /home/pkgeval/.julia/packages/Zygote/1GK3J/src/Zygote.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile Zygote [e88e6eb3-aa80-5325-afca-941959d7151f] to "/home/pkgeval/.julia/compiled/v1.13/Zygote/jl_PQkX8V" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:14 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/MLJGaussianProcesses/4Dqeh/src/MLJGaussianProcesses.jl:1 in expression starting at stdin: Loading failed after 152.89s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using MLJGaussianProcesses'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 725.04s: package fails to precompile