Package evaluation of BioMakie on Julia 1.13.0-DEV.427 (855bef3b06*) started at 2025-04-24T08:40:45.224 ################################################################################ # Set-up # Set-up completed after 0.18s ################################################################################ # Installation # Installing BioMakie... Resolving package versions... Installed JpegTurbo_jll ─────────────── v3.1.1+0 Installed ImageIO ───────────────────── v0.6.9 Installed libdecor_jll ──────────────── v0.2.2+0 Installed x265_jll ──────────────────── v4.1.0+0 Installed AxisArrays ────────────────── v0.4.7 Installed OffsetArrays ──────────────── v1.17.0 Installed BioGenerics ───────────────── v0.1.5 Installed TiffImages ────────────────── v0.11.3 Installed Libmount_jll ──────────────── v2.41.0+0 Installed LERC_jll ──────────────────── v4.0.1+0 Installed HypergeometricFunctions ───── v0.3.28 Installed JpegTurbo ─────────────────── v0.1.6 Installed libfdk_aac_jll ────────────── v2.0.3+0 Installed StatsFuns ─────────────────── v1.4.0 Installed PNGFiles ──────────────────── v0.4.4 Installed Preferences ───────────────── v1.4.3 Installed LoggingExtras ─────────────── v1.1.0 Installed Accessors ─────────────────── v0.1.42 Installed FFTW ──────────────────────── v1.8.1 Installed RelocatableFolders ────────── v1.0.1 Installed Sixel ─────────────────────── v0.1.3 Installed Hyperscript ───────────────── v0.0.5 Installed Contour ───────────────────── v0.6.3 Installed PDMats ────────────────────── v0.11.34 Installed Opus_jll ──────────────────── v1.3.3+0 Installed Xorg_xkbcomp_jll ──────────── v1.4.7+0 Installed StableHashTraits ──────────── v1.3.4 Installed Unitful ───────────────────── v1.22.0 Installed EarCut_jll ────────────────── v2.2.4+0 Installed ConcurrentUtilities ───────── v2.5.0 Installed Grisu ─────────────────────── v1.0.2 Installed Multisets ─────────────────── v0.4.5 Installed StaticArrays ──────────────── v1.9.13 Installed Permutations ──────────────── v0.4.23 Installed OpenEXR ───────────────────── v0.3.3 Installed ProgressMeter ─────────────── v1.10.4 Installed PlotUtils ─────────────────── v1.4.3 Installed GLMakie ───────────────────── v0.9.9 Installed ModernGL ──────────────────── v1.1.8 Installed NearestNeighbors ──────────── v0.4.21 Installed EnumX ─────────────────────── v1.0.5 Installed InitialValues ─────────────── v0.3.1 Installed OpenSSL ───────────────────── v1.4.3 Installed CEnum ─────────────────────── v0.5.0 Installed FileIO ────────────────────── v1.17.0 Installed BioSequences ──────────────── v3.4.1 Installed InvertedIndices ───────────── v1.3.1 Installed HTTP ──────────────────────── v1.10.16 Installed DelimitedFiles ────────────── v1.9.1 Installed IntelOpenMP_jll ───────────── v2025.0.4+0 Installed Statistics ────────────────── v1.11.1 Installed Polynomials ───────────────── v4.0.19 Installed Cairo_jll ─────────────────── v1.18.4+0 Installed Fontconfig_jll ────────────── v2.16.0+0 Installed Xorg_libxkbfile_jll ───────── v1.1.3+0 Installed GPUArrays ─────────────────── v10.3.1 Installed Netpbm ────────────────────── v1.1.1 Installed Xorg_libXinerama_jll ──────── v1.1.6+0 Installed SignedDistanceFields ──────── v0.4.0 Installed FilePaths ─────────────────── v0.8.3 Installed Mods ──────────────────────── v2.2.6 Installed Xorg_libXau_jll ───────────── v1.0.13+0 Installed Distances ─────────────────── v0.10.12 Installed RoundingEmulator ──────────── v0.2.1 Installed EpollShim_jll ─────────────── v0.0.20230411+1 Installed ZygoteRules ───────────────── v0.2.7 Installed TableTraitsUtils ──────────── v1.0.2 Installed Missings ──────────────────── v1.2.0 Installed RealDot ───────────────────── v0.1.0 Installed SIMD ──────────────────────── v3.7.1 Installed TupleTools ────────────────── v1.6.0 Installed FastaIO ───────────────────── v1.1.0 Installed FiniteDiff ────────────────── v2.27.0 Installed TriplotBase ───────────────── v0.1.0 Installed IrrationalConstants ───────── v0.2.4 Installed Showoff ───────────────────── v1.0.3 Installed AutoHashEquals ────────────── v2.2.0 Installed IRTools ───────────────────── v0.4.14 Installed LLVM ──────────────────────── v9.3.1 Installed Giflib_jll ────────────────── v5.2.3+0 Installed JSON ──────────────────────── v0.21.4 Installed ArnoldiMethod ─────────────── v0.4.0 Installed ColorSchemes ──────────────── v3.29.0 Installed GZip ──────────────────────── v0.6.2 Installed AbstractLattices ──────────── v0.3.1 Installed Pango_jll ─────────────────── v1.56.1+0 Installed PtrArrays ─────────────────── v1.3.0 Installed SimpleRandom ──────────────── v0.3.2 Installed PolygonOps ────────────────── v0.1.2 Installed OpenBLASConsistentFPCSR_jll ─ v0.3.29+0 Installed ADTypes ───────────────────── v1.14.0 Installed Bzip2_jll ─────────────────── v1.0.9+0 Installed SpecialFunctions ──────────── v2.5.1 Installed QOI ───────────────────────── v1.0.1 Installed SimpleBufferStream ────────── v1.2.0 Installed xkbcommon_jll ─────────────── v1.4.1+2 Installed XZ_jll ────────────────────── v5.8.1+0 Installed HarfBuzz_jll ──────────────── v8.5.0+0 Installed Bessels ───────────────────── v0.2.8 Installed isoband_jll ───────────────── v0.2.3+0 Installed PkgVersion ────────────────── v0.3.3 Installed TensorCast ────────────────── v0.4.8 Installed BioMakie ──────────────────── v0.4.1 Installed StringEncodings ───────────── v0.3.7 Installed Zygote ────────────────────── v0.6.76 Installed BioSymbols ────────────────── v5.1.3 Installed NaNMath ───────────────────── v1.1.3 Installed StaticArraysCore ──────────── v1.4.3 Installed MathTeXEngine ─────────────── v0.5.7 Installed PikaParser ────────────────── v0.6.1 Installed MicroCollections ──────────── v0.2.0 Installed DefineSingletons ──────────── v0.1.2 Installed WebP ──────────────────────── v0.1.3 Installed LZO_jll ───────────────────── v2.10.3+0 Installed FriBidi_jll ───────────────── v1.0.17+0 Installed StringViews ───────────────── v1.3.4 Installed UnicodeFun ────────────────── v0.4.1 Installed NLSolversBase ─────────────── v7.9.1 Installed Graphics ──────────────────── v1.1.3 Installed TranscodingStreams ────────── v0.11.3 Installed Rmath_jll ─────────────────── v0.5.1+0 Installed ImageMetadata ─────────────── v0.9.10 Installed MbedTLS ───────────────────── v1.1.9 Installed GLFW_jll ──────────────────── v3.4.0+2 Installed MolecularGraph ────────────── v0.16.1 Installed SimpleGraphs ──────────────── v0.8.6 Installed Ratios ────────────────────── v0.4.5 Installed x264_jll ──────────────────── v10164.0.1+0 Installed Graphs ────────────────────── v1.12.1 Installed CommonSubexpressions ──────── v0.3.1 Installed MappedArrays ──────────────── v0.4.2 Installed FreeType ──────────────────── v4.1.1 Installed DataStructures ────────────── v0.18.22 Installed ChainRules ────────────────── v1.72.3 Installed Colors ────────────────────── v0.12.11 Installed PaddedViews ───────────────── v0.5.12 Installed StridedViews ──────────────── v0.4.1 Installed DataValues ────────────────── v0.4.13 Installed FreeType2_jll ─────────────── v2.13.4+0 Installed StatsAPI ──────────────────── v1.7.0 Installed BangBang ──────────────────── v0.4.4 Installed LinearAlgebraX ────────────── v0.2.10 Installed Compat ────────────────────── v4.16.0 Installed Lazy ──────────────────────── v0.15.1 Installed GridLayoutBase ────────────── v0.10.2 Installed LazyModules ───────────────── v0.3.1 Installed CodecZlib ─────────────────── v0.7.8 Installed MosaicViews ───────────────── v0.3.4 Installed Automa ────────────────────── v1.1.0 Installed Xorg_libxcb_jll ───────────── v1.17.1+0 Installed StatsBase ─────────────────── v0.34.4 Installed BioAlignments ─────────────── v3.1.0 Installed libpng_jll ────────────────── v1.6.47+0 Installed ExceptionUnwrapping ───────── v0.1.11 Installed libaom_jll ────────────────── v3.11.0+0 Installed StructTypes ───────────────── v1.11.0 Installed Scratch ───────────────────── v1.2.1 Installed Dbus_jll ──────────────────── v1.16.2+0 Installed TransmuteDims ─────────────── v0.1.16 Installed ImageCore ─────────────────── v0.10.5 Installed ColorTypes ────────────────── v0.11.5 Installed MIToS ─────────────────────── v3.0.6 Installed Meshes ────────────────────── v0.43.5 Installed oneTBB_jll ────────────────── v2022.0.0+0 Installed DiffRules ─────────────────── v1.15.1 Installed ArgCheck ──────────────────── v2.5.0 Installed Zstd_jll ──────────────────── v1.5.7+1 Installed TensorCore ────────────────── v0.1.1 Installed Twiddle ───────────────────── v1.1.2 Installed Xorg_libXext_jll ──────────── v1.3.7+0 Installed NamedArrays ───────────────── v0.10.3 Installed JSON3 ─────────────────────── v1.14.2 Installed TableTraits ───────────────── v1.0.1 Installed FreeTypeAbstraction ───────── v0.10.6 Installed SimplePartitions ──────────── v0.3.3 Installed Isoband ───────────────────── v0.1.1 Installed Expat_jll ─────────────────── v2.6.5+0 Installed DiffResults ───────────────── v1.1.0 Installed Inflate ───────────────────── v0.1.5 Installed WeakKeyIdDicts ────────────── v0.1.0 Installed Imath_jll ─────────────────── v3.1.11+0 Installed PositiveFactorizations ────── v0.2.4 Installed ImageShow ─────────────────── v0.3.8 Installed Parsers ───────────────────── v2.8.2 Installed SplitApplyCombine ─────────── v1.2.3 Installed Extents ───────────────────── v0.1.5 Installed Setfield ──────────────────── v1.1.2 Installed MKL_jll ───────────────────── v2025.0.1+1 Installed Libtiff_jll ───────────────── v4.7.1+0 Installed Format ────────────────────── v1.3.7 Installed JLLWrappers ───────────────── v1.7.0 Installed Packing ───────────────────── v0.5.1 Installed AbstractFFTs ──────────────── v1.5.0 Installed ConstructionBase ──────────── v1.5.8 Installed Animations ────────────────── v0.4.2 Installed DataValueInterfaces ───────── v1.0.0 Installed LLVMExtra_jll ─────────────── v0.0.35+0 Installed OrderedCollections ────────── v1.8.0 Installed Libffi_jll ────────────────── v3.2.2+2 Installed ColorVectorSpace ──────────── v0.10.0 Installed AbstractTrees ─────────────── v0.4.5 Installed Indexing ──────────────────── v1.1.1 Installed Xorg_libXrender_jll ───────── v0.9.12+0 Installed PairwiseListMatrices ──────── v0.11.1 Installed Ogg_jll ───────────────────── v1.3.5+1 Installed ExactPredicates ───────────── v2.2.8 Installed KernelDensity ─────────────── v0.6.9 Installed Colorfy ───────────────────── v0.1.6 Installed ChainRulesCore ────────────── v1.25.1 Installed Interpolations ────────────── v0.15.1 Installed Xorg_libXi_jll ────────────── v1.8.3+0 Installed MeshIO ────────────────────── v0.4.13 Installed ArrayInterface ────────────── v7.18.0 Installed Combinatorics ─────────────── v1.0.2 Installed Reexport ──────────────────── v1.2.2 Installed LogExpFunctions ───────────── v0.3.29 Installed StackViews ────────────────── v0.1.1 Installed IntervalTrees ─────────────── v1.1.0 Installed Quaternions ───────────────── v0.7.6 Installed AliasTables ───────────────── v1.1.3 Installed LineSearches ──────────────── v7.3.0 Installed RingLists ─────────────────── v0.2.9 Installed FFTW_jll ──────────────────── v3.3.11+0 Installed RangeArrays ───────────────── v0.3.2 Installed Strided ───────────────────── v2.3.0 Installed MacroTools ────────────────── v0.5.16 Installed IntervalArithmetic ────────── v0.22.29 Installed Rotations ─────────────────── v1.7.1 Installed PackageExtensionCompat ────── v1.0.2 Installed OpenSpecFun_jll ───────────── v0.5.6+0 Installed CompositionsBase ──────────── v0.1.2 Installed UnPack ────────────────────── v1.0.2 Installed Xorg_libXcursor_jll ───────── v1.2.4+0 Installed SparseInverseSubset ───────── v0.1.2 Installed GeoFormatTypes ────────────── v0.4.4 Installed InverseFunctions ──────────── v0.1.17 Installed MbedTLS_jll ───────────────── v2.28.6+2 Installed Libuuid_jll ───────────────── v2.41.0+0 Installed SimpleTraits ──────────────── v0.9.4 Installed YAML ──────────────────────── v0.4.13 Installed ColorBrewer ───────────────── v0.4.1 Installed OpenEXR_jll ───────────────── v3.2.4+0 Installed DocStringExtensions ───────── v0.9.4 Installed FASTX ─────────────────────── v2.1.7 Installed GPUArraysCore ─────────────── v0.1.6 Installed BioStructures ─────────────── v4.4.2 Installed Wayland_protocols_jll ─────── v1.36.0+0 Installed libinchi_jll ──────────────── v1.6.0+0 Installed StableRNGs ────────────────── v1.0.2 Installed Adapt ─────────────────────── v4.3.0 Installed DifferentiationInterface ──── v0.6.52 Installed Transducers ───────────────── v0.4.84 Installed Rmath ─────────────────────── v0.8.0 Installed ImageBase ─────────────────── v0.1.7 Installed IntervalSets ──────────────── v0.7.10 Installed Graphite2_jll ─────────────── v1.3.15+0 Installed libass_jll ────────────────── v0.15.2+0 Installed IntegerMathUtils ──────────── v0.1.2 Installed XML2_jll ──────────────────── v2.13.6+1 Installed Cairo ─────────────────────── v1.1.1 Installed Pixman_jll ────────────────── v0.44.2+0 Installed Gettext_jll ───────────────── v0.21.0+0 Installed Wayland_jll ───────────────── v1.21.0+2 Installed BitFlags ──────────────────── v0.1.9 Installed Tables ────────────────────── v1.12.0 Installed Xorg_xtrans_jll ───────────── v1.6.0+0 Installed IterTools ─────────────────── v1.10.0 Installed GLFW ──────────────────────── v3.4.4 Installed Xorg_xkeyboard_config_jll ─── v2.44.0+0 Installed DataAPI ───────────────────── v1.16.0 Installed LLVMOpenMP_jll ────────────── v18.1.8+0 Installed MakieCore ─────────────────── v0.7.3 Installed FFMPEG_jll ────────────────── v7.1.0+0 Installed GeometryBasics ────────────── v0.4.11 Installed Dictionaries ──────────────── v0.4.5 Installed FixedPointNumbers ─────────── v0.8.5 Installed Xorg_libXrandr_jll ────────── v1.5.5+0 Installed IndirectArrays ────────────── v1.0.0 Installed RecipesBase ───────────────── v1.3.4 Installed ShaderAbstractions ────────── v0.4.1 Installed Primes ────────────────────── v0.5.7 Installed Xorg_libXfixes_jll ────────── v6.0.1+0 Installed Baselet ───────────────────── v0.1.1 Installed IteratorInterfaceExtensions ─ v1.0.0 Installed Optim ─────────────────────── v1.12.0 Installed DelaunayTriangulation ─────── v0.8.12 Installed PrecompileTools ───────────── v1.3.2 Installed LaTeXStrings ──────────────── v1.4.0 Installed libsixel_jll ──────────────── v1.10.5+0 Installed Libglvnd_jll ──────────────── v1.7.1+1 Installed LAME_jll ──────────────────── v3.100.2+0 Installed Libiconv_jll ──────────────── v1.18.0+0 Installed LazyStack ─────────────────── v0.1.3 Installed Glib_jll ──────────────────── v2.82.4+0 Installed libvorbis_jll ─────────────── v1.3.7+2 Installed FilePathsBase ─────────────── v0.9.24 Installed StructArrays ──────────────── v0.6.18 Installed URIs ──────────────────────── v1.5.2 Installed AxisAlgorithms ────────────── v1.1.0 Installed ImageAxes ─────────────────── v0.6.12 Installed ForwardDiff ───────────────── v1.0.1 Installed FillArrays ────────────────── v1.13.0 Installed QuadGK ────────────────────── v2.11.2 Installed Xorg_libXdmcp_jll ─────────── v1.1.6+0 Installed Requires ──────────────────── v1.3.1 Installed Observables ───────────────── v0.5.5 Installed CircularArrays ────────────── v1.4.0 Installed GeoInterface ──────────────── v1.4.1 Installed Xorg_libX11_jll ───────────── v1.8.12+0 Installed SplittablesBase ───────────── v0.1.15 Installed coordgenlibs_jll ──────────── v3.0.2+0 Installed CoordRefSystems ───────────── v0.7.4 Installed TransformsBase ────────────── v1.6.0 Installed Parameters ────────────────── v0.12.3 Installed CRlibm_jll ────────────────── v1.0.1+0 Installed WoodburyMatrices ──────────── v1.0.0 Installed LightXML ──────────────────── v0.9.1 Installed Distributions ─────────────── v0.25.119 Installed libwebp_jll ───────────────── v1.5.0+0 Installed SimplePolynomials ─────────── v0.2.18 Installed SortingAlgorithms ─────────── v1.2.1 Installed Makie ─────────────────────── v0.20.8 Installing 74 artifacts Installed artifact Xorg_libXcursor 227.1 KiB Installed artifact oneTBB 435.6 KiB Installed artifact Libmount 6.4 MiB Installed artifact Xorg_xkeyboard_config 537.5 KiB Installed artifact Xorg_xkbcomp 274.8 KiB Installed artifact libinchi 933.4 KiB Installed artifact Xorg_libxkbfile 486.7 KiB Installed artifact Xorg_libXi 1.6 MiB Installed artifact Zstd 646.0 KiB Installed artifact Expat 271.4 KiB Installed artifact coordgenlibs 303.6 KiB Installed artifact Xorg_xtrans 48.2 KiB Installed artifact Xorg_libXau 36.6 KiB Installed artifact Wayland 406.1 KiB Installed artifact Rmath 121.9 KiB Installed artifact x264 2.1 MiB Installed artifact LLVMOpenMP 661.6 KiB Installed artifact Libglvnd 833.5 KiB Installed artifact XML2 2.5 MiB Installed artifact Xorg_libXdmcp 67.7 KiB Installed artifact libass 372.4 KiB Installed artifact xkbcommon 509.6 KiB Installed artifact Libiconv 1.9 MiB Installed artifact Xorg_libXfixes 195.9 KiB Installed artifact Xorg_libXext 699.9 KiB Installed artifact LAME 292.5 KiB Installed artifact OpenEXR 1.9 MiB Installed artifact FFTW 2.2 MiB Installed artifact libvorbis 271.0 KiB Installed artifact XZ 1.5 MiB Installed artifact Xorg_libX11 13.9 MiB Installed artifact Xorg_libXrender 435.9 KiB Installed artifact Libtiff 3.2 MiB Installed artifact Imath 182.8 KiB Installed artifact Graphite2 120.2 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact EarCut 80.5 KiB Installed artifact Libffi 34.1 KiB Installed artifact LLVMExtra 3.1 MiB Installed artifact GLFW 180.1 KiB Installed artifact Giflib 154.6 KiB Installed artifact isoband 25.7 KiB Installed artifact FFMPEG 11.4 MiB Installed artifact Xorg_libxcb 2.1 MiB Installed artifact libpng 328.5 KiB Installed artifact Gettext 4.5 MiB Installed artifact libsixel 177.3 KiB Installed artifact Opus 908.1 KiB Installed artifact libdecor 44.1 KiB Installed artifact HarfBuzz 1.7 MiB Installed artifact Ogg 257.2 KiB Installed artifact MbedTLS 2.1 MiB Installed artifact Libuuid 3.5 MiB Installed artifact Xorg_libXrandr 354.5 KiB Installed artifact FriBidi 78.9 KiB Installed artifact Cairo 2.2 MiB Installed artifact CRlibm 169.5 KiB Installed artifact x265 1.4 MiB Installed artifact Xorg_libXinerama 50.1 KiB Installed artifact libaom 6.4 MiB Installed artifact Pixman 372.2 KiB Installed artifact Bzip2 503.5 KiB Installed artifact Pango 1.1 MiB Installed artifact libwebp 2.6 MiB Installed artifact Glib 7.6 MiB Installed artifact LERC 272.9 KiB Installed artifact Dbus 489.8 KiB Installed artifact Fontconfig 522.5 KiB Installed artifact libfdk_aac 2.8 MiB Installed artifact FreeType2 1.5 MiB Installed artifact Wayland_protocols 129.5 KiB Installed artifact JpegTurbo 1.6 MiB Installed artifact LZO 208.9 KiB Installed artifact OpenBLASConsistentFPCSR 9.9 MiB Updating `~/.julia/environments/v1.13/Project.toml` [7de43156] + BioMakie v0.4.1 Updating `~/.julia/environments/v1.13/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs v1.5.0 [398f06c4] + AbstractLattices v0.3.1 [1520ce14] + AbstractTrees v0.4.5 [7d9f7c33] + Accessors v0.1.42 [79e6a3ab] + Adapt v4.3.0 [66dad0bd] + AliasTables v1.1.3 [27a7e980] + Animations v0.4.2 [dce04be8] + ArgCheck v2.5.0 [ec485272] + ArnoldiMethod v0.4.0 [4fba245c] + ArrayInterface v7.18.0 [15f4f7f2] + AutoHashEquals v2.2.0 [67c07d97] + Automa v1.1.0 [13072b0f] + AxisAlgorithms v1.1.0 [39de3d68] + AxisArrays v0.4.7 [198e06fe] + BangBang v0.4.4 [9718e550] + Baselet v0.1.1 [0e736298] + Bessels v0.2.8 [00701ae9] + BioAlignments v3.1.0 [47718e42] + BioGenerics v0.1.5 [7de43156] + BioMakie v0.4.1 [7e6ae17a] + BioSequences v3.4.1 [de9282ab] + BioStructures v4.4.2 [3c28c6f8] + BioSymbols v5.1.3 [d1d4a3ce] + BitFlags v0.1.9 [fa961155] + CEnum v0.5.0 [159f3aea] + Cairo v1.1.1 [082447d4] + ChainRules v1.72.3 [d360d2e6] + ChainRulesCore v1.25.1 [7a955b69] + CircularArrays v1.4.0 [944b1d66] + CodecZlib v0.7.8 [a2cac450] + ColorBrewer v0.4.1 [35d6a980] + ColorSchemes v3.29.0 ⌅ [3da002f7] + ColorTypes v0.11.5 ⌃ [c3611d14] + ColorVectorSpace v0.10.0 ⌅ [03fe91ce] + Colorfy v0.1.6 ⌅ [5ae59095] + Colors v0.12.11 [861a8166] + Combinatorics v1.0.2 [bbf7d656] + CommonSubexpressions v0.3.1 [34da2185] + Compat v4.16.0 [a33af91c] + CompositionsBase v0.1.2 [f0e56b4a] + ConcurrentUtilities v2.5.0 [187b0558] + ConstructionBase v1.5.8 [d38c429a] + Contour v0.6.3 ⌅ [b46f11dc] + CoordRefSystems v0.7.4 [9a962f9c] + DataAPI v1.16.0 [864edb3b] + DataStructures v0.18.22 [e2d170a0] + DataValueInterfaces v1.0.0 [e7dc6d0d] + DataValues v0.4.13 [244e2a9f] + DefineSingletons v0.1.2 ⌅ [927a84f5] + DelaunayTriangulation v0.8.12 [8bb1440f] + DelimitedFiles v1.9.1 [85a47980] + Dictionaries v0.4.5 [163ba53b] + DiffResults v1.1.0 [b552c78f] + DiffRules v1.15.1 [a0c0ee7d] + DifferentiationInterface v0.6.52 [b4f34e82] + Distances v0.10.12 [31c24e10] + Distributions v0.25.119 [ffbed154] + DocStringExtensions v0.9.4 [4e289a0a] + EnumX v1.0.5 [429591f6] + ExactPredicates v2.2.8 [460bff9d] + ExceptionUnwrapping v0.1.11 [411431e0] + Extents v0.1.5 [c2308a5c] + FASTX v2.1.7 [7a1cc6ca] + FFTW v1.8.1 [a0c94c4b] + FastaIO v1.1.0 [5789e2e9] + FileIO v1.17.0 ⌅ [8fc22ac5] + FilePaths v0.8.3 [48062228] + FilePathsBase v0.9.24 [1a297f60] + FillArrays v1.13.0 [6a86dc24] + FiniteDiff v2.27.0 [53c48c17] + FixedPointNumbers v0.8.5 [1fa38f19] + Format v1.3.7 [f6369f11] + ForwardDiff v1.0.1 [b38be410] + FreeType v4.1.1 [663a7486] + FreeTypeAbstraction v0.10.6 [f7f18e0c] + GLFW v3.4.4 ⌅ [e9467ef8] + GLMakie v0.9.9 ⌃ [0c68f7d7] + 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v5.8.1+0 [4f6342f7] + Xorg_libX11_jll v1.8.12+0 [0c0b7dd1] + Xorg_libXau_jll v1.0.13+0 [935fb764] + Xorg_libXcursor_jll v1.2.4+0 [a3789734] + Xorg_libXdmcp_jll v1.1.6+0 [1082639a] + Xorg_libXext_jll v1.3.7+0 [d091e8ba] + Xorg_libXfixes_jll v6.0.1+0 [a51aa0fd] + Xorg_libXi_jll v1.8.3+0 [d1454406] + Xorg_libXinerama_jll v1.1.6+0 [ec84b674] + Xorg_libXrandr_jll v1.5.5+0 [ea2f1a96] + Xorg_libXrender_jll v0.9.12+0 [c7cfdc94] + Xorg_libxcb_jll v1.17.1+0 [cc61e674] + Xorg_libxkbfile_jll v1.1.3+0 [35661453] + Xorg_xkbcomp_jll v1.4.7+0 [33bec58e] + Xorg_xkeyboard_config_jll v2.44.0+0 [c5fb5394] + Xorg_xtrans_jll v1.6.0+0 [3161d3a3] + Zstd_jll v1.5.7+1 [f6050b86] + coordgenlibs_jll v3.0.2+0 [9a68df92] + isoband_jll v0.2.3+0 [a4ae2306] + libaom_jll v3.11.0+0 [0ac62f75] + libass_jll v0.15.2+0 [1183f4f0] + libdecor_jll v0.2.2+0 [f638f0a6] + libfdk_aac_jll v2.0.3+0 [172afb32] + libinchi_jll v1.6.0+0 [b53b4c65] + libpng_jll v1.6.47+0 [075b6546] + libsixel_jll v1.10.5+0 [f27f6e37] + libvorbis_jll v1.3.7+2 [c5f90fcd] + libwebp_jll v1.5.0+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [1270edf5] + x264_jll v10164.0.1+0 [dfaa095f] + x265_jll v4.1.0+0 [d8fb68d0] + xkbcommon_jll v1.4.1+2 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [8bf52ea8] + CRC32c v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.7.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [3fa0cd96] + REPL v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.12.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [efcefdf7] + PCRE2_jll v10.44.0+1 [bea87d4a] + SuiteSparse_jll v7.10.1+0 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.65.0+0 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌃ and ⌅ have new versions available. Those with ⌃ may be upgradable, but those with ⌅ are restricted by compatibility constraints from upgrading. To see why use `status --outdated -m` Installation completed after 58.55s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... No packages added to or removed from `~/.julia/environments/pkgeval/Project.toml` No packages added to or removed from `~/.julia/environments/pkgeval/Manifest.toml` Precompiling package dependencies... Precompiling packages... 2337.6 ms ✓ Combinatorics 803.8 ms ✓ RangeArrays 1032.8 ms ✓ StringViews 1131.8 ms ✓ AbstractFFTs 815.9 ms ✓ LaTeXStrings 982.5 ms ✓ PositiveFactorizations 810.6 ms ✓ IndirectArrays 753.9 ms ✓ PolygonOps 701.3 ms ✓ IteratorInterfaceExtensions 4481.5 ms ✓ ModernGL 1080.5 ms ✓ TensorCore 889.7 ms ✓ GeoFormatTypes 867.5 ms ✓ StatsAPI 700.4 ms ✓ AbstractLattices 1320.0 ms ✓ ADTypes 887.2 ms ✓ Contour 1623.7 ms ✓ InitialValues 811.6 ms ✓ CEnum 1650.8 ms ✓ OffsetArrays 903.0 ms ✓ TriplotBase 2594.0 ms ✓ Format 1013.0 ms ✓ UnPack 4477.2 ms ✓ FillArrays 790.4 ms ✓ IntegerMathUtils 2728.2 ms ✓ Bessels 913.8 ms ✓ InverseFunctions 1188.7 ms ✓ Statistics 855.5 ms ✓ ArgCheck 1149.7 ms ✓ IterTools 4502.3 ms ✓ MacroTools 1346.4 ms ✓ Grisu 1301.0 ms ✓ OrderedCollections 1032.2 ms ✓ Observables 940.7 ms ✓ AutoHashEquals 1156.2 ms ✓ Requires 766.9 ms ✓ DataValueInterfaces 856.1 ms ✓ EnumX 844.9 ms ✓ RealDot 1012.9 ms ✓ StableRNGs 763.6 ms ✓ Reexport 1205.0 ms ✓ DocStringExtensions 1102.2 ms ✓ AbstractTrees 790.9 ms ✓ Twiddle 2205.0 ms ✓ IrrationalConstants 1029.2 ms ✓ IntervalSets 1143.5 ms ✓ URIs 917.6 ms ✓ RoundingEmulator 785.9 ms ✓ SimpleBufferStream 780.2 ms ✓ CompositionsBase 968.8 ms ✓ Extents 796.9 ms ✓ PtrArrays 1188.1 ms ✓ IntervalTrees 1197.2 ms ✓ TranscodingStreams 768.0 ms ✓ DefineSingletons 1025.1 ms ✓ NaNMath 867.8 ms ✓ LazyModules 1071.0 ms ✓ Multisets 1003.4 ms ✓ DelimitedFiles 1066.6 ms ✓ RingLists 848.9 ms ✓ InvertedIndices 978.5 ms ✓ Inflate 1050.3 ms ✓ ConstructionBase 1037.7 ms ✓ Mods 819.5 ms ✓ DataAPI 780.3 ms ✓ PackageExtensionCompat 861.1 ms ✓ BitFlags 800.8 ms ✓ Indexing 885.4 ms ✓ StaticArraysCore 987.7 ms ✓ TupleTools 944.5 ms ✓ MappedArrays 875.6 ms ✓ WeakKeyIdDicts 2198.4 ms ✓ Baselet 1185.3 ms ✓ GZip 1229.8 ms ✓ SuiteSparse 1870.9 ms ✓ ConcurrentUtilities 1876.7 ms ✓ ProgressMeter 1484.1 ms ✓ WoodburyMatrices 1653.5 ms ✓ StructTypes 34691.9 ms ✓ Unitful 964.9 ms ✓ Scratch 1136.0 ms ✓ LoggingExtras 1167.5 ms ✓ Preferences 1144.3 ms ✓ Compat 3859.3 ms ✓ UnicodeFun 1183.6 ms ✓ Hyperscript 2305.0 ms ✓ ExceptionUnwrapping 5271.7 ms ✓ PkgVersion 1125.7 ms ✓ Permutations 4062.8 ms ✓ AbstractFFTs → AbstractFFTsTestExt 805.0 ms ✓ TableTraits 1915.8 ms ✓ DifferentiationInterface 945.7 ms ✓ StackViews 982.8 ms ✓ PaddedViews 828.0 ms ✓ CircularArrays 5023.8 ms ✓ FillArrays → FillArraysSparseArraysExt 1184.6 ms ✓ Primes 1971.7 ms ✓ InverseFunctions → InverseFunctionsTestExt 1642.9 ms ✓ InverseFunctions → InverseFunctionsDatesExt 1512.5 ms ✓ SignedDistanceFields 3608.7 ms ✓ FixedPointNumbers 1460.5 ms ✓ Distances 1337.9 ms ✓ Statistics → SparseArraysExt 980.8 ms ✓ FillArrays → FillArraysStatisticsExt 1494.8 ms ✓ CommonSubexpressions 5450.4 ms ✓ Lazy 6084.9 ms ✓ IRTools 4053.5 ms ✓ SimpleTraits 940.4 ms ✓ Showoff 1042.6 ms ✓ Parameters 3959.5 ms ✓ MakieCore 825.8 ms ✓ Ratios 953.2 ms ✓ Adapt 11343.9 ms ✓ FileIO 5931.8 ms ✓ DataValues 1129.8 ms ✓ Quaternions 1549.6 ms ✓ PikaParser 930.9 ms ✓ TransformsBase 1449.6 ms ✓ LogExpFunctions 870.8 ms ✓ IntervalSets → IntervalSetsRandomExt 875.6 ms ✓ IntervalSets → IntervalSetsStatisticsExt 894.1 ms ✓ CompositionsBase → CompositionsBaseInverseFunctionsExt 1024.6 ms ✓ AliasTables 983.7 ms ✓ BioGenerics 984.9 ms ✓ CodecZlib 867.5 ms ✓ ConstructionBase → ConstructionBaseIntervalSetsExt 882.6 ms ✓ ConstructionBase → ConstructionBaseLinearAlgebraExt 878.4 ms ✓ ADTypes → ADTypesConstructionBaseExt 1959.5 ms ✓ GeoInterface 1028.4 ms ✓ Missings 999.6 ms ✓ StridedViews 4201.7 ms ✓ OpenSSL 1968.8 ms ✓ Dictionaries 925.9 ms ✓ DiffResults 1032.2 ms ✓ FastaIO 1800.1 ms ✓ PDMats 1281.2 ms ✓ SparseInverseSubset 1411.1 ms ✓ AxisAlgorithms 2306.5 ms ✓ Unitful → ConstructionBaseUnitfulExt 2359.8 ms ✓ Unitful → InverseFunctionsUnitfulExt 1166.3 ms ✓ RelocatableFolders 1146.5 ms ✓ JLLWrappers 970.0 ms ✓ PrecompileTools 925.3 ms ✓ Compat → CompatLinearAlgebraExt 1715.2 ms ✓ Tables 1332.9 ms ✓ DifferentiationInterface → DifferentiationInterfaceSparseArraysExt 1051.2 ms ✓ MosaicViews 4663.6 ms ✓ ColorTypes 1368.3 ms ✓ Distances → DistancesSparseArraysExt 984.6 ms ✓ Ratios → RatiosFixedPointNumbersExt 1328.1 ms ✓ Adapt → AdaptSparseArraysExt 1183.7 ms ✓ ArrayInterface 1189.6 ms ✓ GPUArraysCore 989.1 ms ✓ OffsetArrays → OffsetArraysAdaptExt 866.6 ms ✓ LogExpFunctions → LogExpFunctionsInverseFunctionsExt 1744.8 ms ✓ AxisArrays 2931.1 ms ✓ Setfield 4996.0 ms ✓ Accessors 1270.2 ms ✓ TableTraitsUtils 831.4 ms ✓ StridedViews → StridedViewsPtrArraysExt 1168.5 ms ✓ Strided 1449.1 ms ✓ SplitApplyCombine 1441.3 ms ✓ FillArrays → FillArraysPDMatsExt 1403.5 ms ✓ coordgenlibs_jll 1344.9 ms ✓ libinchi_jll 1342.3 ms ✓ OpenBLASConsistentFPCSR_jll 1375.8 ms ✓ Graphite2_jll 1355.3 ms ✓ Libmount_jll 1127.4 ms ✓ EpollShim_jll 1378.1 ms ✓ LLVMOpenMP_jll 1399.7 ms ✓ Bzip2_jll 1357.3 ms ✓ Rmath_jll 1371.4 ms ✓ Xorg_libXau_jll 1362.0 ms ✓ libpng_jll 1372.3 ms ✓ libfdk_aac_jll 1473.6 ms ✓ Imath_jll 6501.4 ms ✓ IntelOpenMP_jll 1344.4 ms ✓ Giflib_jll 1397.9 ms ✓ LAME_jll 1375.6 ms ✓ LERC_jll 1339.7 ms ✓ EarCut_jll 1371.0 ms ✓ CRlibm_jll 1398.1 ms ✓ JpegTurbo_jll 1442.4 ms ✓ XZ_jll 1379.3 ms ✓ Ogg_jll 1368.1 ms ✓ oneTBB_jll 1370.6 ms ✓ Xorg_libXdmcp_jll 1366.2 ms ✓ x265_jll 1359.2 ms ✓ x264_jll 6692.6 ms ✓ LLVMExtra_jll 1412.2 ms ✓ libaom_jll 1367.3 ms ✓ MbedTLS_jll 1384.4 ms ✓ Zstd_jll 1400.1 ms ✓ Expat_jll 1335.8 ms ✓ LZO_jll 1352.7 ms ✓ Opus_jll 1203.5 ms ✓ Xorg_xtrans_jll 1360.4 ms ✓ Libiconv_jll 1411.4 ms ✓ Libffi_jll 1373.2 ms ✓ isoband_jll 1194.0 ms ✓ Wayland_protocols_jll 1354.7 ms ✓ FFTW_jll 1407.4 ms ✓ OpenSpecFun_jll 1397.2 ms ✓ FriBidi_jll 1382.6 ms ✓ Libuuid_jll 13707.6 ms ✓ StaticArrays 2931.1 ms ✓ RecipesBase 2607.8 ms ✓ BioSymbols 18549.8 ms ✓ SIMD 18018.7 ms ✓ Parsers 6511.6 ms ✓ DataStructures 2487.7 ms ✓ FilePathsBase 2836.4 ms ✓ ChainRulesCore 1742.3 ms ✓ StructArrays 6743.0 ms ✓ StableHashTraits 6602.8 ms ✓ QOI 3990.0 ms ✓ ColorVectorSpace 7786.6 ms ✓ Colors 1306.2 ms ✓ ArrayInterface → ArrayInterfaceSparseArraysExt 819.5 ms ✓ ArrayInterface → ArrayInterfaceStaticArraysCoreExt 894.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceGPUArraysCoreExt 875.2 ms ✓ ArrayInterface → ArrayInterfaceGPUArraysCoreExt 4255.9 ms ✓ SplittablesBase 2155.3 ms ✓ Accessors → LinearAlgebraExt 2197.9 ms ✓ Accessors → TestExt 2131.1 ms ✓ Accessors → IntervalSetsExt 2526.0 ms ✓ Accessors → UnitfulExt 1393.9 ms ✓ Pixman_jll 1601.6 ms ✓ FreeType2_jll 1850.9 ms ✓ Rmath 1601.0 ms ✓ OpenEXR_jll 10363.1 ms ✓ IntervalArithmetic 1608.5 ms ✓ libsixel_jll 1624.2 ms ✓ libvorbis_jll 9615.6 ms ✓ MKL_jll 1869.0 ms ✓ Xorg_libxcb_jll 23111.8 ms ✓ LLVM 2377.3 ms ✓ MbedTLS 1688.6 ms ✓ Libtiff_jll 1627.9 ms ✓ Dbus_jll 1459.5 ms ✓ StringEncodings 2160.9 ms ✓ XML2_jll 1843.3 ms ✓ Isoband 5612.9 ms ✓ SpecialFunctions 4090.9 ms ✓ ArnoldiMethod 1608.2 ms ✓ StaticArrays → StaticArraysStatisticsExt 1692.3 ms ✓ ConstructionBase → ConstructionBaseStaticArraysExt 1600.5 ms ✓ DifferentiationInterface → DifferentiationInterfaceStaticArraysExt 1513.8 ms ✓ Adapt → AdaptStaticArraysExt 4388.8 ms ✓ Rotations 1859.1 ms ✓ Accessors → StaticArraysExt 38158.7 ms ✓ Polynomials 1384.9 ms ✓ IntervalSets → IntervalSetsRecipesBaseExt 9770.8 ms ✓ BioSequences 11476.8 ms ✓ BioStructures 20860.4 ms ✓ Automa 15310.5 ms ✓ JSON3 3885.9 ms ✓ JSON 2729.7 ms ✓ SortingAlgorithms 3815.6 ms ✓ QuadGK 5733.7 ms ✓ NamedArrays 2781.7 ms ✓ SimplePartitions 130165.9 ms ✓ TiffImages 1481.0 ms ✓ FilePathsBase → FilePathsBaseMmapExt 3489.1 ms ✓ FilePathsBase → FilePathsBaseTestExt 1736.8 ms ✓ FilePaths 1439.4 ms ✓ ChainRulesCore → ChainRulesCoreSparseArraysExt 2583.8 ms ✓ ZygoteRules 1254.4 ms ✓ LazyStack 1025.8 ms ✓ AbstractFFTs → AbstractFFTsChainRulesCoreExt 1017.0 ms ✓ ADTypes → ADTypesChainRulesCoreExt 1022.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceChainRulesCoreExt 987.8 ms ✓ Distances → DistancesChainRulesCoreExt 1351.9 ms ✓ TransmuteDims 3320.3 ms ✓ LogExpFunctions → LogExpFunctionsChainRulesCoreExt 909.7 ms ✓ ArrayInterface → ArrayInterfaceChainRulesCoreExt 1659.8 ms ✓ StaticArrays → StaticArraysChainRulesCoreExt 966.9 ms ✓ StructArrays → StructArraysAdaptExt 1458.5 ms ✓ StructArrays → StructArraysSparseArraysExt 1863.2 ms ✓ StructArrays → StructArraysStaticArraysExt 1002.2 ms ✓ StructArrays → StructArraysGPUArraysCoreExt 1204.7 ms ✓ Accessors → StructArraysExt 1449.8 ms ✓ Graphics 1486.2 ms ✓ Animations 33707.4 ms ✓ ImageCore 7987.7 ms ✓ ColorSchemes 1392.9 ms ✓ FiniteDiff 1814.7 ms ✓ BangBang 2159.2 ms ✓ FreeType 1696.2 ms ✓ Fontconfig_jll 7163.8 ms ✓ OpenEXR 10723.5 ms ✓ ExactPredicates 1356.7 ms ✓ IntervalArithmetic → IntervalArithmeticIntervalSetsExt 3721.8 ms ✓ IntervalArithmetic → IntervalArithmeticRecipesBaseExt 7348.3 ms ✓ FFTW 1601.1 ms ✓ Xorg_libX11_jll 10751.0 ms ✓ GPUArrays HTTP Waiting for background task / IO / timer. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. [pid 1611] waiting for IO to finish: Handle type uv_handle_t->data This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. 158535.1 ms ✓ HTTP 2872.4 ms ✓ YAML 1374.0 ms ✓ LightXML 1633.4 ms ✓ Gettext_jll 1654.4 ms ✓ Wayland_jll 4588.4 ms ✓ SpecialFunctions → SpecialFunctionsChainRulesCoreExt 2707.4 ms ✓ HypergeometricFunctions 1371.8 ms ✓ DiffRules 1999.5 ms ✓ ColorVectorSpace → SpecialFunctionsExt 4416.3 ms ✓ NearestNeighbors 13446.3 ms ✓ Graphs 2296.9 ms ✓ Rotations → RotationsRecipesBaseExt 5935.8 ms ✓ Polynomials → PolynomialsMakieCoreExt 3969.2 ms ✓ Polynomials → PolynomialsChainRulesCoreExt 4530.0 ms ✓ SimplePolynomials 3805.1 ms ✓ BioAlignments 1919.9 ms ✓ BioStructures → BioStructuresBioSequencesExt 20751.0 ms ✓ FASTX 3290.9 ms ✓ ColorBrewer 7871.5 ms ✓ StatsBase 4225.4 ms ✓ PairwiseListMatrices 4776.3 ms ✓ Interpolations 21448.6 ms ✓ TensorCast 14390.2 ms ✓ GeometryBasics 12737.8 ms ✓ ChainRules 4755.6 ms ✓ ImageBase 7523.3 ms ✓ PNGFiles 12239.6 ms ✓ Sixel 11862.9 ms ✓ JpegTurbo 2510.1 ms ✓ Colorfy 17753.0 ms ✓ PlotUtils 1329.1 ms ✓ FiniteDiff → FiniteDiffSparseArraysExt 1548.2 ms ✓ FiniteDiff → FiniteDiffStaticArraysExt 1024.2 ms ✓ DifferentiationInterface → DifferentiationInterfaceFiniteDiffExt 1907.1 ms ✓ BangBang → BangBangStaticArraysExt 1360.6 ms ✓ BangBang → BangBangChainRulesCoreExt 1278.0 ms ✓ BangBang → BangBangStructArraysExt 1246.5 ms ✓ BangBang → BangBangTablesExt 2330.4 ms ✓ MicroCollections 4314.5 ms ✓ Polynomials → PolynomialsFFTWExt 1591.3 ms ✓ Xorg_libXrender_jll 1607.2 ms ✓ Xorg_libXext_jll 1591.9 ms ✓ Xorg_libXfixes_jll 1580.0 ms ✓ Xorg_libxkbfile_jll 7576.5 ms ✓ FileIO → HTTPExt 1588.6 ms ✓ Glib_jll 3154.3 ms ✓ StatsFuns 9456.8 ms ✓ ForwardDiff 1336.0 ms ✓ IntervalArithmetic → IntervalArithmeticDiffRulesExt 4212.3 ms ✓ LinearAlgebraX 1962.4 ms ✓ BioStructures → BioStructuresBioAlignmentsExt 2570.0 ms ✓ FASTX → BioSequencesExt 15816.8 ms ✓ MIToS 4023.9 ms ✓ Interpolations → InterpolationsUnitfulExt 13602.4 ms ✓ GridLayoutBase 3061.5 ms ✓ Packing 5604.1 ms ✓ ShaderAbstractions 9440.3 ms ✓ MeshIO 6969.0 ms ✓ FreeTypeAbstraction 2007.4 ms ✓ ArrayInterface → ArrayInterfaceChainRulesExt 9159.0 ms ✓ ImageAxes 9901.8 ms ✓ ImageShow 3336.0 ms ✓ Colorfy → ColorfyUnitfulExt 7922.2 ms ✓ Transducers 1454.8 ms ✓ Xorg_libXinerama_jll 1493.1 ms ✓ Xorg_libXrandr_jll 1490.2 ms ✓ Libglvnd_jll 1477.2 ms ✓ Xorg_libXcursor_jll 1457.6 ms ✓ Xorg_libXi_jll 1480.4 ms ✓ Xorg_xkbcomp_jll 1604.1 ms ✓ Cairo_jll 1300.3 ms ✓ StatsFuns → StatsFunsInverseFunctionsExt 3784.3 ms ✓ StatsFuns → StatsFunsChainRulesCoreExt 12207.4 ms ✓ Distributions 4060.4 ms ✓ ForwardDiff → ForwardDiffStaticArraysExt 1801.3 ms ✓ DifferentiationInterface → DifferentiationInterfaceForwardDiffExt 2236.3 ms ✓ IntervalArithmetic → IntervalArithmeticForwardDiffExt ✗ Zygote 23752.8 ms ✓ MathTeXEngine 8586.3 ms ✓ ImageMetadata 2367.7 ms ✓ Transducers → TransducersAdaptExt 1684.7 ms ✓ libwebp_jll 1340.6 ms ✓ Xorg_xkeyboard_config_jll 1664.1 ms ✓ HarfBuzz_jll 4224.6 ms ✓ Distributions → DistributionsTestExt 4089.6 ms ✓ Distributions → DistributionsChainRulesCoreExt 3910.9 ms ✓ SimpleRandom 4183.6 ms ✓ Colorfy → ColorfyDistributionsExt 4406.0 ms ✓ NLSolversBase ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt ✗ CoordRefSystems 11083.7 ms ✓ Netpbm 9331.6 ms ✓ WebP 1555.5 ms ✓ xkbcommon_jll 1722.3 ms ✓ libass_jll 1719.7 ms ✓ Pango_jll 5506.8 ms ✓ KernelDensity 6434.0 ms ✓ LineSearches ✗ Meshes 5419.1 ms ✓ ImageIO 1679.5 ms ✓ FFMPEG_jll 1646.8 ms ✓ libdecor_jll 2625.6 ms ✓ Cairo 10836.6 ms ✓ Optim 1620.8 ms ✓ GLFW_jll 24246.3 ms ✓ MolecularGraph 7849.6 ms ✓ SimpleGraphs 2989.6 ms ✓ GLFW 13971.2 ms ✓ DelaunayTriangulation 182901.7 ms ✓ Makie ✗ Meshes → MeshesMakieExt ✗ GLMakie ✗ BioMakie 402 dependencies successfully precompiled in 2161 seconds. 40 already precompiled. 7 dependencies had output during precompilation: ┌ IntervalSets │ WARNING: Constructor for type "UnitRange" was extended in `IntervalSets` without explicit qualification or import. │ NOTE: Assumed "UnitRange" refers to `Base.UnitRange`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function UnitRange end`. │ Hint: To silence the warning, qualify `UnitRange` as `Base.UnitRange` in the method signature or explicitly `import Base: UnitRange`. └ ┌ Makie │ ┌ Warning: `stable_hash(x; version < 4)` is not supported in Julia 1.11 or higher. Calls should not error, but *may* silently produce different hashes. `stable_hash` is intended to be used for caching, so this likely will simply reduce the number of cache hits. Upgrade to using `stable_hash(x; version=4) to avoid this warning. │ └ @ StableHashTraits ~/.julia/packages/StableHashTraits/FV3wr/src/main_interface.jl:55 └ ┌ StableRNGs │ WARNING: Constructor for type "Sampler" was extended in `StableRNGs` without explicit qualification or import. │ NOTE: Assumed "Sampler" refers to `Random.Sampler`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Sampler end`. │ Hint: To silence the warning, qualify `Sampler` as `Random.Sampler` in the method signature or explicitly `import Random: Sampler`. └ ┌ BioSymbols │ WARNING: Constructor for type "Char" was extended in `BioSymbols` without explicit qualification or import. │ NOTE: Assumed "Char" refers to `Base.Char`. This behavior is deprecated and may differ in future versions. │ NOTE: This behavior may have differed in Julia versions prior to 1.12. │ Hint: If you intended to create a new generic function of the same name, use `function Char end`. │ Hint: To silence the warning, qualify `Char` as `Base.Char` in the method signature or explicitly `import Base: Char`. └ ┌ IRTools │ WARNING: Imported binding InteractiveUtils.typesof was undeclared at import time during import to Inner. └ ┌ MKL_jll │ Downloading artifact: IntelOpenMP └ ┌ HTTP │ ┌ Info: Ignoring an error that occurred during the precompilation workload │ │ exception = │ │ HTTP.ConnectError for url = `https://localhost:57813`: TimeoutException: try_with_timeout timed out after 30.0 seconds │ │ Stacktrace: │ │ [1] (::HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}})(req::HTTP.Messages.Request; proxy::Nothing, socket_type::Type, socket_type_tls::Nothing, readtimeout::Int64, connect_timeout::Int64, logerrors::Bool, logtag::Nothing, closeimmediately::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.ConnectionRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:88 │ │ [2] connections │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/ConnectionRequest.jl:60 [inlined] │ │ [3] (::Base.var"#47#48"{Base.var"#49#50"{ExponentialBackOff, HTTP.RetryRequest.var"#retrylayer##2#retrylayer##3"{Int64, typeof(HTTP.RetryRequest.FALSE), HTTP.Messages.Request, Base.RefValue{Int64}}, HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(args::HTTP.Messages.Request; kwargs::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ Base ./error.jl:311 │ │ [4] (::HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}})(req::HTTP.Messages.Request; retry::Bool, retries::Int64, retry_delays::ExponentialBackOff, retry_check::Function, retry_non_idempotent::Bool, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.RetryRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:75 │ │ [5] manageretries │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RetryRequest.jl:30 [inlined] │ │ [6] (::HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}})(req::HTTP.Messages.Request; cookies::Bool, cookiejar::HTTP.Cookies.CookieJar, kw::@Kwargs{iofunction::Nothing, decompress::Nothing, verbose::Int64}) │ │ @ HTTP.CookieRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:42 │ │ [7] managecookies │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/CookieRequest.jl:19 [inlined] │ │ [8] (::HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}})(req::HTTP.Messages.Request; iofunction::Nothing, decompress::Nothing, basicauth::Bool, detect_content_type::Bool, canonicalize_headers::Bool, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.HeadersRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:71 │ │ [9] defaultheaders │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/HeadersRequest.jl:14 [inlined] │ │ [10] (::HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}})(req::HTTP.Messages.Request; redirect::Bool, redirect_limit::Int64, redirect_method::Nothing, forwardheaders::Bool, response_stream::Nothing, kw::@Kwargs{verbose::Int64}) │ │ @ HTTP.RedirectRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:25 │ │ [11] redirects │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/RedirectRequest.jl:14 [inlined] │ │ [12] (::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}})(method::String, url::URIs.URI, headers::Nothing, body::Vector{UInt8}; copyheaders::Bool, response_stream::Nothing, http_version::HTTP.Strings.HTTPVersion, verbose::Int64, kw::@Kwargs{}) │ │ @ HTTP.MessageRequest ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:35 │ │ [13] makerequest │ │ @ ~/.julia/packages/HTTP/MIUdD/src/clientlayers/MessageRequest.jl:24 [inlined] │ │ [14] request(stack::HTTP.MessageRequest.var"#makerequest#messagelayer##0"{HTTP.MessageRequest.var"#makerequest#1#messagelayer##1"{HTTP.RedirectRequest.var"#redirects#redirectlayer##0"{HTTP.RedirectRequest.var"#redirects#1#redirectlayer##1"{HTTP.HeadersRequest.var"#defaultheaders#headerslayer##0"{HTTP.HeadersRequest.var"#defaultheaders#1#headerslayer##1"{HTTP.CookieRequest.var"#managecookies#cookielayer##0"{HTTP.CookieRequest.var"#managecookies#1#cookielayer##1"{HTTP.RetryRequest.var"#manageretries#retrylayer##0"{HTTP.RetryRequest.var"#manageretries#1#retrylayer##1"{HTTP.ConnectionRequest.var"#connections#connectionlayer##0"{HTTP.ConnectionRequest.var"#connections#1#connectionlayer##1"{HTTP.TimeoutRequest.var"#timeouts#timeoutlayer##0"{HTTP.TimeoutRequest.var"#timeouts#1#timeoutlayer##1"{HTTP.ExceptionRequest.var"#exceptions#exceptionlayer##0"{HTTP.ExceptionRequest.var"#exceptions#1#exceptionlayer##1"{typeof(HTTP.StreamRequest.streamlayer)}}}}}}}}}}}}}}}}, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing; headers::Nothing, body::Vector{UInt8}, query::Nothing, kw::@Kwargs{}) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:457 │ │ [15] request(stack::Function, method::String, url::String, h::Nothing, b::Vector{UInt8}, q::Nothing) │ │ @ HTTP ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:455 │ │ [16] #request#21 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:315 [inlined] │ │ [17] request (repeats 2 times) │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:313 [inlined] │ │ [18] get │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:518 [inlined] │ │ [19] #51 │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:36 [inlined] │ │ [20] withenv(::HTTP.var"#51#52"{String}, ::Pair{String, Union{Nothing, String}}, ::Vararg{Pair{String, Union{Nothing, String}}}) │ │ @ Base ./env.jl:265 │ │ [21] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:35 [inlined] │ │ [22] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] │ │ [23] macro expansion │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:34 [inlined] │ │ [24] macro expansion │ │ @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] │ │ [25] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/precompile.jl:4 │ │ [26] include(mapexpr::Function, mod::Module, _path::String) │ │ @ Base ./Base.jl:304 │ │ [27] top-level scope │ │ @ ~/.julia/packages/HTTP/MIUdD/src/HTTP.jl:643 │ │ [28] include(mod::Module, _path::String) │ │ @ Base ./Base.jl:303 │ │ [29] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) │ │ @ Base ./loading.jl:2978 │ │ [30] top-level scope │ │ @ stdin:5 │ │ [31] eval(m::Module, e::Any) │ │ @ Core ./boot.jl:489 │ │ [32] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) │ │ @ Base ./loading.jl:2824 │ │ [33] include_string │ │ @ ./loading.jl:2834 [inlined] │ │ [34] exec_options(opts::Base.JLOptions) │ │ @ Base ./client.jl:329 │ │ [35] _start() │ └ @ Base ./client.jl:563 │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. │ │ [pid 1611] waiting for IO to finish: │ Handle type uv_handle_t->data │ This means that a package has started a background task or event source that has not finished running. For precompilation to complete successfully, the event source needs to be closed explicitly. See the developer documentation on fixing precompilation hangs for more help. └ ERROR: LoadError: The following 1 direct dependency failed to precompile: BioMakie Failed to precompile BioMakie [7de43156-b762-4475-b39f-ba1e1e59ee2f] to "/home/pkgeval/.julia/compiled/v1.13/BioMakie/jl_Vf10gi" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool; reuse::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241 [6] empty_screen @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined] [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329 [8] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [14] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79 [15] include(mod::Module, _path::String) @ Base ./Base.jl:303 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [20] include_string @ ./loading.jl:2834 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_U0bXlx" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin: in expression starting at /PkgEval.jl/scripts/precompile.jl:37 Precompilation failed after 2034.45s ################################################################################ # Loading # Loading BioMakie... Precompiling packages... ✗ Zygote ✗ GLMakie ✗ Zygote → ZygoteDistancesExt ✗ Zygote → ZygoteColorsExt ✗ DifferentiationInterface → DifferentiationInterfaceZygoteExt ✗ CoordRefSystems ✗ Meshes ✗ Meshes → MeshesMakieExt Info Given BioMakie was explicitly requested, output will be shown live  ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace:  [1] _ErrorCallbackWrapper(code::Int32, description::Cstring)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46  [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580  [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window)  @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404  [4] Window  @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined]  [5] empty_screen(debugging::Bool; reuse::Bool)  @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241  [6] empty_screen  @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined]  [7] singleton_screen(debugging::Bool)  @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329  [8] macro expansion  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined]  [9] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined]  [10] macro expansion  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined]  [11] macro expansion  @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined]  [12] top-level scope  @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16  [13] include(mapexpr::Function, mod::Module, _path::String)  @ Base ./Base.jl:304  [14] top-level scope  @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79  [15] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)  @ Base ./loading.jl:2978  [17] top-level scope  @ stdin:5  [18] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [20] include_string  @ ./loading.jl:2834 [inlined]  [21] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [22] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_dyEEJj" (ProcessExited(1)). Stacktrace:  [1] error(s::String)  @ Base ./error.jl:44  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)  @ Base ./loading.jl:3265  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()  @ Base ./loading.jl:2651  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93  [5] #mkpidlock#7  @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined]  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})  @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})  @ Base ./reflection.jl:1279  [8] #invokelatest_gr#234  @ ./reflection.jl:1287 [inlined]  [9] invokelatest_gr  @ ./reflection.jl:1281 [inlined]  [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)  @ Base ./loading.jl:3836  [11] maybe_cachefile_lock  @ ./loading.jl:3833 [inlined]  [12] __require_prelocked(pkg::Base.PkgId, env::String)  @ Base ./loading.jl:2637  [13] _require_prelocked(uuidkey::Base.PkgId, env::String)  @ Base ./loading.jl:2465  [14] macro expansion  @ ./loading.jl:2393 [inlined]  [15] macro expansion  @ ./lock.jl:376 [inlined]  [16] __require(into::Module, mod::Symbol)  @ Base ./loading.jl:2358  [17] require(into::Module, mod::Symbol)  @ Base ./loading.jl:2334  [18] top-level scope  @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36  [19] include(mod::Module, _path::String)  @ Base ./Base.jl:303  [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)  @ Base ./loading.jl:2978  [21] top-level scope  @ stdin:5  [22] eval(m::Module, e::Any)  @ Core ./boot.jl:489  [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)  @ Base ./loading.jl:2824  [24] include_string  @ ./loading.jl:2834 [inlined]  [25] exec_options(opts::Base.JLOptions)  @ Base ./client.jl:329  [26] _start()  @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin:5 ✗ BioMakie 0 dependencies successfully precompiled in 255 seconds. 442 already precompiled. ERROR: The following 1 direct dependency failed to precompile: BioMakie Failed to precompile BioMakie [7de43156-b762-4475-b39f-ba1e1e59ee2f] to "/home/pkgeval/.julia/compiled/v1.13/BioMakie/jl_9qa4bJ" (ProcessExited(1)). ┌ Warning: GLFW couldn't create an OpenGL window. │ This likely means, you don't have an OpenGL capable Graphic Card, │ or you don't have an OpenGL 3.3 capable video driver installed. │ Have a look at the troubleshooting section in the GLMakie readme: │ https://github.com/MakieOrg/Makie.jl/tree/master/GLMakie#troubleshooting-opengl. └ @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:250 ERROR: LoadError: GLFWError (API_UNAVAILABLE): GLX: No GLXFBConfigs returned Stacktrace: [1] _ErrorCallbackWrapper(code::Int32, description::Cstring) @ GLFW ~/.julia/packages/GLFW/a10jC/src/callback.jl:46 [2] CreateWindow(width::Int64, height::Int64, title::String, monitor::GLFW.Monitor, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:580 [3] GLFW.Window(; name::String, resolution::Tuple{Int64, Int64}, debugging::Bool, major::Int64, minor::Int64, windowhints::Vector{Tuple{UInt32, Integer}}, contexthints::Vector{Tuple{UInt32, Integer}}, visible::Bool, focus::Bool, fullscreen::Bool, monitor::Nothing, share::GLFW.Window) @ GLFW ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:404 [4] Window @ ~/.julia/packages/GLFW/a10jC/src/glfw3.jl:362 [inlined] [5] empty_screen(debugging::Bool; reuse::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:241 [6] empty_screen @ ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:222 [inlined] [7] singleton_screen(debugging::Bool) @ GLMakie ~/.julia/packages/GLMakie/QyIWu/src/screen.jl:329 [8] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:21 [inlined] [9] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:73 [inlined] [10] macro expansion @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:18 [inlined] [11] macro expansion @ ~/.julia/packages/PrecompileTools/Z8SWe/src/workloads.jl:121 [inlined] [12] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:16 [13] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [14] top-level scope @ ~/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:79 [15] include(mod::Module, _path::String) @ Base ./Base.jl:303 [16] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String) @ Base ./loading.jl:2978 [17] top-level scope @ stdin:5 [18] eval(m::Module, e::Any) @ Core ./boot.jl:489 [19] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [20] include_string @ ./loading.jl:2834 [inlined] [21] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [22] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/precompiles.jl:15 in expression starting at /home/pkgeval/.julia/packages/GLMakie/QyIWu/src/GLMakie.jl:1 in expression starting at stdin:5 ERROR: LoadError: Failed to precompile GLMakie [e9467ef8-e4e7-5192-8a1a-b1aee30e663a] to "/home/pkgeval/.julia/compiled/v1.13/GLMakie/jl_dyEEJj" (ProcessExited(1)). Stacktrace: [1] error(s::String) @ Base ./error.jl:44 [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing) @ Base ./loading.jl:3265 [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})() @ Base ./loading.jl:2651 [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:93 [5] #mkpidlock#7 @ /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:88 [inlined] [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64}) @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.13/FileWatching/src/pidfile.jl:114 [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any}) @ Base ./reflection.jl:1279 [8] #invokelatest_gr#234 @ ./reflection.jl:1287 [inlined] [9] invokelatest_gr @ ./reflection.jl:1281 [inlined] [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64) @ Base ./loading.jl:3836 [11] maybe_cachefile_lock @ ./loading.jl:3833 [inlined] [12] __require_prelocked(pkg::Base.PkgId, env::String) @ Base ./loading.jl:2637 [13] _require_prelocked(uuidkey::Base.PkgId, env::String) @ Base ./loading.jl:2465 [14] macro expansion @ ./loading.jl:2393 [inlined] [15] macro expansion @ ./lock.jl:376 [inlined] [16] __require(into::Module, mod::Symbol) @ Base ./loading.jl:2358 [17] require(into::Module, mod::Symbol) @ Base ./loading.jl:2334 [18] top-level scope @ ~/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:36 [19] include(mod::Module, _path::String) @ Base ./Base.jl:303 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing) @ Base ./loading.jl:2978 [21] top-level scope @ stdin:5 [22] eval(m::Module, e::Any) @ Core ./boot.jl:489 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String) @ Base ./loading.jl:2824 [24] include_string @ ./loading.jl:2834 [inlined] [25] exec_options(opts::Base.JLOptions) @ Base ./client.jl:329 [26] _start() @ Base ./client.jl:563 in expression starting at /home/pkgeval/.julia/packages/BioMakie/8hFFE/src/BioMakie.jl:1 in expression starting at stdin: Loading failed after 256.52s ERROR: LoadError: failed process: Process(`/opt/julia/bin/julia -C native -J/opt/julia/lib/julia/sys.so -g1 --check-bounds=yes --inline=yes --pkgimages=existing -e 'using BioMakie'`, ProcessExited(1)) [1] Stacktrace: [1] pipeline_error @ ./process.jl:602 [inlined] [2] run(::Cmd; wait::Bool) @ Base ./process.jl:517 [3] run(::Cmd) @ Base ./process.jl:514 [4] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:193 [5] include(mod::Module, _path::String) @ Base ./Base.jl:303 [6] exec_options(opts::Base.JLOptions) @ Base ./client.jl:331 [7] _start() @ Base ./client.jl:563 in expression starting at /PkgEval.jl/scripts/evaluate.jl:184 PkgEval failed after 2539.61s: package fails to precompile