Package evaluation of TransitionsInTimeseries on Julia 1.12.0-DEV.2153 (83dcbd426d*) started at 2025-03-31T12:02:48.510 ################################################################################ # Set-up # Installing PkgEval dependencies (TestEnv)... Set-up completed after 9.7s ################################################################################ # Installation # Installing TransitionsInTimeseries... Resolving package versions... Installed oneTBB_jll ─────────────── v2022.0.0+0 Installed Calculus ───────────────── v0.5.2 Installed IrrationalConstants ────── v0.2.4 Installed DiffRules ──────────────── v1.15.1 Installed Adapt ──────────────────── v4.3.0 Installed OffsetArrays ───────────── v1.16.0 Installed Rmath ──────────────────── v0.8.0 Installed HypergeometricFunctions ── v0.3.28 Installed StatsFuns ──────────────── v1.3.2 Installed Preferences ────────────── v1.4.3 Installed Accessors ──────────────── v0.1.42 Installed LombScargle ────────────── v1.0.3 Installed PtrArrays ──────────────── v1.3.0 Installed TransitionsInTimeseries ── v0.1.4 Installed DSP ────────────────────── v0.7.10 Installed FFTW ───────────────────── v1.8.1 Installed DiffResults ────────────── v1.1.0 Installed IterTools ──────────────── v1.10.0 Installed DataAPI ────────────────── v1.16.0 Installed PDMats ─────────────────── v0.11.33 Installed ADTypes ────────────────── v1.14.0 Installed MKL_jll ────────────────── v2025.0.1+1 Installed Setfield ───────────────── v1.1.2 Installed SpecialFunctions ───────── v2.5.0 Installed RecipesBase ────────────── v1.3.4 Installed StaticArrays ───────────── v1.9.13 Installed JLLWrappers ────────────── v1.7.0 Installed AbstractFFTs ───────────── v1.5.0 Installed StaticArraysCore ───────── v1.4.3 Installed NearestNeighbors ───────── v0.4.21 Installed Measurements ───────────── v2.12.0 Installed Roots ──────────────────── v2.2.6 Installed NaNMath ────────────────── v1.1.2 Installed OrderedCollections ─────── v1.8.0 Installed ConstructionBase ───────── v1.5.8 Installed PrecompileTools ────────── v1.3.0 Installed NLSolversBase ──────────── v7.9.0 Installed HypothesisTests ────────── v0.11.3 Installed ChainRulesCore ─────────── v1.25.1 Installed Neighborhood ───────────── v0.2.4 Installed StateSpaceSets ─────────── v2.4.0 Installed DelayEmbeddings ────────── v2.8.0 Installed TimeseriesSurrogates ───── v2.7.2 Installed Interpolations ─────────── v0.15.1 Installed Combinatorics ──────────── v1.0.2 Installed ArrayInterface ─────────── v7.18.0 Installed DelimitedFiles ─────────── v1.9.1 Installed ForwardDiff ────────────── v0.10.38 Installed FillArrays ─────────────── v1.13.0 Installed Reexport ───────────────── v1.2.2 Installed Rmath_jll ──────────────── v0.5.1+0 Installed QuadGK ─────────────────── v2.11.2 Installed Wavelets ───────────────── v0.10.1 Installed Statistics ─────────────── v1.11.1 Installed AxisAlgorithms ─────────── v1.1.0 Installed Ratios ─────────────────── v0.4.5 Installed Polynomials ────────────── v4.0.19 Installed CommonSubexpressions ───── v0.3.1 Installed DataStructures ─────────── v0.18.22 Installed IntelOpenMP_jll ────────── v2025.0.4+0 Installed Requires ───────────────── v1.3.1 Installed LogExpFunctions ────────── v0.3.29 Installed AliasTables ────────────── v1.1.3 Installed FFTW_jll ───────────────── v3.3.10+3 Installed MacroTools ─────────────── v0.5.15 Installed OpenSpecFun_jll ────────── v0.5.6+0 Installed StatsAPI ───────────────── v1.7.0 Installed Compat ─────────────────── v4.16.0 Installed CompositionsBase ───────── v0.1.2 Installed InverseFunctions ───────── v0.1.17 Installed CommonSolve ────────────── v0.2.4 Installed Distances ──────────────── v0.10.12 Installed WoodburyMatrices ───────── v1.0.0 Installed LsqFit ─────────────────── v0.15.0 Installed Distributions ──────────── v0.25.118 Installed Missings ───────────────── v1.2.0 Installed SortingAlgorithms ──────── v1.2.1 Installed DocStringExtensions ────── v0.9.4 Installed FiniteDiff ─────────────── v2.27.0 Installed StatsBase ──────────────── v0.34.4 Installed DifferentiationInterface ─ v0.6.49 Installing 4 artifacts Installed artifact Rmath 121.9 KiB Installed artifact OpenSpecFun 194.9 KiB Installed artifact FFTW 2.2 MiB Installed artifact oneTBB 435.6 KiB Updating `~/.julia/environments/v1.12/Project.toml` [5f5b98ec] + TransitionsInTimeseries v0.1.4 Updating `~/.julia/environments/v1.12/Manifest.toml` [47edcb42] + ADTypes v1.14.0 [621f4979] + AbstractFFTs 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[a2af1166] + SortingAlgorithms v1.2.1 [276daf66] + SpecialFunctions v2.5.0 [40b095a5] + StateSpaceSets v2.4.0 [90137ffa] + StaticArrays v1.9.13 [1e83bf80] + StaticArraysCore v1.4.3 [10745b16] + Statistics v1.11.1 [82ae8749] + StatsAPI v1.7.0 [2913bbd2] + StatsBase v0.34.4 [4c63d2b9] + StatsFuns v1.3.2 [c804724b] + TimeseriesSurrogates v2.7.2 [5f5b98ec] + TransitionsInTimeseries v0.1.4 [29a6e085] + Wavelets v0.10.1 [efce3f68] + WoodburyMatrices v1.0.0 [f5851436] + FFTW_jll v3.3.10+3 [1d5cc7b8] + IntelOpenMP_jll v2025.0.4+0 [856f044c] + MKL_jll v2025.0.1+1 [efe28fd5] + OpenSpecFun_jll v0.5.6+0 [f50d1b31] + Rmath_jll v0.5.1+0 [1317d2d5] + oneTBB_jll v2022.0.0+0 [0dad84c5] + ArgTools v1.1.2 [56f22d72] + Artifacts v1.11.0 [2a0f44e3] + Base64 v1.11.0 [ade2ca70] + Dates v1.11.0 [8ba89e20] + Distributed v1.11.0 [f43a241f] + Downloads v1.6.0 [7b1f6079] + FileWatching v1.11.0 [9fa8497b] + Future v1.11.0 [b77e0a4c] + InteractiveUtils v1.11.0 [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0 [4af54fe1] + LazyArtifacts v1.11.0 [b27032c2] + LibCURL v0.6.4 [76f85450] + LibGit2 v1.11.0 [8f399da3] + Libdl v1.11.0 [37e2e46d] + LinearAlgebra v1.12.0 [56ddb016] + Logging v1.11.0 [d6f4376e] + Markdown v1.11.0 [a63ad114] + Mmap v1.11.0 [ca575930] + NetworkOptions v1.3.0 [44cfe95a] + Pkg v1.12.0 [de0858da] + Printf v1.11.0 [9a3f8284] + Random v1.11.0 [ea8e919c] + SHA v0.7.0 [9e88b42a] + Serialization v1.11.0 [1a1011a3] + SharedArrays v1.11.0 [6462fe0b] + Sockets v1.11.0 [2f01184e] + SparseArrays v1.12.0 [f489334b] + StyledStrings v1.11.0 [4607b0f0] + SuiteSparse [fa267f1f] + TOML v1.0.3 [a4e569a6] + Tar v1.10.0 [8dfed614] + Test v1.11.0 [cf7118a7] + UUIDs v1.11.0 [4ec0a83e] + Unicode v1.11.0 [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] + LibCURL_jll v8.11.1+1 [e37daf67] + LibGit2_jll v1.9.0+0 [29816b5a] + LibSSH2_jll v1.11.3+1 [14a3606d] + MozillaCACerts_jll v2024.12.31 [4536629a] + OpenBLAS_jll v0.3.29+0 [05823500] + OpenLibm_jll v0.8.5+0 [458c3c95] + OpenSSL_jll v3.0.16+0 [bea87d4a] + SuiteSparse_jll v7.8.3+2 [83775a58] + Zlib_jll v1.3.1+2 [8e850b90] + libblastrampoline_jll v5.12.0+0 [8e850ede] + nghttp2_jll v1.64.0+1 [3f19e933] + p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m` Installation completed after 12.35s ################################################################################ # Precompilation # Precompiling PkgEval dependencies... Precompiling packages... 6917.4 ms ✓ TestEnv 1 dependency successfully precompiled in 9 seconds. 25 already precompiled. Precompiling package dependencies... Precompilation completed after 467.62s ################################################################################ # Testing # Testing TransitionsInTimeseries Status `/tmp/jl_EtmcPi/Project.toml` [8bb1440f] DelimitedFiles v1.9.1 [31c24e10] Distributions v0.25.118 [6fe1bfb0] OffsetArrays v1.16.0 [860ef19b] StableRNGs v1.0.2 [10745b16] Statistics v1.11.1 [c804724b] TimeseriesSurrogates v2.7.2 [5f5b98ec] TransitionsInTimeseries v0.1.4 [9a3f8284] Random v1.11.0 [8dfed614] Test v1.11.0 Status `/tmp/jl_EtmcPi/Manifest.toml` [47edcb42] ADTypes v1.14.0 [621f4979] AbstractFFTs v1.5.0 [7d9f7c33] Accessors v0.1.42 [79e6a3ab] Adapt v4.3.0 [66dad0bd] AliasTables v1.1.3 [4fba245c] ArrayInterface v7.18.0 [13072b0f] AxisAlgorithms v1.1.0 [49dc2e85] Calculus v0.5.2 [d360d2e6] ChainRulesCore v1.25.1 [861a8166] Combinatorics v1.0.2 [38540f10] CommonSolve v0.2.4 [bbf7d656] CommonSubexpressions v0.3.1 [34da2185] Compat v4.16.0 [a33af91c] CompositionsBase v0.1.2 [187b0558] ConstructionBase v1.5.8 ⌅ [717857b8] DSP v0.7.10 [9a962f9c] DataAPI v1.16.0 [864edb3b] DataStructures v0.18.22 [5732040d] DelayEmbeddings v2.8.0 [8bb1440f] DelimitedFiles v1.9.1 [163ba53b] DiffResults v1.1.0 [b552c78f] DiffRules v1.15.1 [a0c0ee7d] DifferentiationInterface v0.6.49 [b4f34e82] Distances v0.10.12 [31c24e10] Distributions v0.25.118 [ffbed154] DocStringExtensions v0.9.4 [7a1cc6ca] FFTW v1.8.1 [1a297f60] FillArrays v1.13.0 [6a86dc24] FiniteDiff v2.27.0 ⌅ [f6369f11] ForwardDiff v0.10.38 [34004b35] HypergeometricFunctions v0.3.28 [09f84164] HypothesisTests v0.11.3 [a98d9a8b] Interpolations v0.15.1 [3587e190] InverseFunctions v0.1.17 [92d709cd] IrrationalConstants v0.2.4 [c8e1da08] IterTools v1.10.0 [692b3bcd] JLLWrappers v1.7.0 [2ab3a3ac] LogExpFunctions v0.3.29 [fc60dff9] LombScargle v1.0.3 [2fda8390] LsqFit v0.15.0 [1914dd2f] MacroTools v0.5.15 [eff96d63] Measurements v2.12.0 [e1d29d7a] Missings v1.2.0 [d41bc354] NLSolversBase v7.9.0 [77ba4419] NaNMath v1.1.2 [b8a86587] NearestNeighbors v0.4.21 [645ca80c] Neighborhood v0.2.4 [6fe1bfb0] OffsetArrays v1.16.0 [bac558e1] OrderedCollections v1.8.0 [90014a1f] PDMats v0.11.33 [f27b6e38] Polynomials v4.0.19 [aea7be01] PrecompileTools v1.3.0 [21216c6a] Preferences v1.4.3 [43287f4e] PtrArrays v1.3.0 [1fd47b50] QuadGK v2.11.2 [c84ed2f1] Ratios v0.4.5 [3cdcf5f2] RecipesBase v1.3.4 [189a3867] Reexport v1.2.2 [ae029012] Requires v1.3.1 [79098fc4] Rmath v0.8.0 [f2b01f46] Roots v2.2.6 [efcf1570] Setfield v1.1.2 [a2af1166] SortingAlgorithms v1.2.1 [276daf66] SpecialFunctions v2.5.0 [860ef19b] StableRNGs v1.0.2 [40b095a5] StateSpaceSets v2.4.0 [90137ffa] StaticArrays v1.9.13 [1e83bf80] StaticArraysCore v1.4.3 [10745b16] Statistics v1.11.1 [82ae8749] StatsAPI v1.7.0 [2913bbd2] StatsBase v0.34.4 [4c63d2b9] StatsFuns v1.3.2 [c804724b] TimeseriesSurrogates v2.7.2 [5f5b98ec] TransitionsInTimeseries v0.1.4 [29a6e085] Wavelets v0.10.1 [efce3f68] WoodburyMatrices v1.0.0 [f5851436] FFTW_jll v3.3.10+3 [1d5cc7b8] IntelOpenMP_jll v2025.0.4+0 [856f044c] MKL_jll v2025.0.1+1 [efe28fd5] OpenSpecFun_jll v0.5.6+0 [f50d1b31] Rmath_jll v0.5.1+0 [1317d2d5] oneTBB_jll v2022.0.0+0 [0dad84c5] ArgTools v1.1.2 [56f22d72] Artifacts v1.11.0 [2a0f44e3] Base64 v1.11.0 [ade2ca70] Dates v1.11.0 [8ba89e20] Distributed v1.11.0 [f43a241f] Downloads v1.6.0 [7b1f6079] FileWatching v1.11.0 [9fa8497b] Future v1.11.0 [b77e0a4c] InteractiveUtils v1.11.0 [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0 [4af54fe1] LazyArtifacts v1.11.0 [b27032c2] LibCURL v0.6.4 [76f85450] LibGit2 v1.11.0 [8f399da3] Libdl v1.11.0 [37e2e46d] LinearAlgebra v1.12.0 [56ddb016] Logging v1.11.0 [d6f4376e] Markdown v1.11.0 [a63ad114] Mmap v1.11.0 [ca575930] NetworkOptions v1.3.0 [44cfe95a] Pkg v1.12.0 [de0858da] Printf v1.11.0 [9a3f8284] Random v1.11.0 [ea8e919c] SHA v0.7.0 [9e88b42a] Serialization v1.11.0 [1a1011a3] SharedArrays v1.11.0 [6462fe0b] Sockets v1.11.0 [2f01184e] SparseArrays v1.12.0 [f489334b] StyledStrings v1.11.0 [4607b0f0] SuiteSparse [fa267f1f] TOML v1.0.3 [a4e569a6] Tar v1.10.0 [8dfed614] Test v1.11.0 [cf7118a7] UUIDs v1.11.0 [4ec0a83e] Unicode v1.11.0 [e66e0078] CompilerSupportLibraries_jll v1.3.0+1 [deac9b47] LibCURL_jll v8.11.1+1 [e37daf67] LibGit2_jll v1.9.0+0 [29816b5a] LibSSH2_jll v1.11.3+1 [14a3606d] MozillaCACerts_jll v2024.12.31 [4536629a] OpenBLAS_jll v0.3.29+0 [05823500] OpenLibm_jll v0.8.5+0 [458c3c95] OpenSSL_jll v3.0.16+0 [bea87d4a] SuiteSparse_jll v7.8.3+2 [83775a58] Zlib_jll v1.3.1+2 [8e850b90] libblastrampoline_jll v5.12.0+0 [8e850ede] nghttp2_jll v1.64.0+1 [3f19e933] p7zip_jll v17.5.0+2 Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. Testing Running tests... sliding ridge regression: Error During Test at /home/pkgeval/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:10 Got exception outside of a @test TaskFailedException nested task error: BoundsError: attempt to access 1-element Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}} at index [2] Stacktrace: [1] throw_boundserror(A::Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, I::Tuple{Int64}) @ Base ./essentials.jl:15 [2] getindex @ ./essentials.jl:917 [inlined] [3] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:87 [inlined] [4] (::TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}, Tuple{typeof(mean), typeof(var), var"#sqsum#sqsum##0"}, Matrix{Float64}, UnitRange{Int64}}})(tid::Int64; onethread::Bool) @ TransitionsInTimeseries ./threadingconstructs.jl:276 [5] #significant_transitions##8 @ ./threadingconstructs.jl:243 [inlined] [6] (::Base.Threads.var"#threading_run##0#threading_run##1"{TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}, Tuple{typeof(mean), typeof(var), var"#sqsum#sqsum##0"}, Matrix{Float64}, UnitRange{Int64}}}, Int64})() @ Base.Threads ./threadingconstructs.jl:177 Stacktrace: [1] threading_run(fun::TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}, Tuple{typeof(mean), typeof(var), var"#sqsum#sqsum##0"}, Matrix{Float64}, UnitRange{Int64}}}, static::Bool) @ Base.Threads ./threadingconstructs.jl:196 [2] macro expansion @ ./threadingconstructs.jl:213 [inlined] [3] significant_transitions(res::SlidingWindowResults{Vector{Float64}, Float64, Float64, Vector{Float64}, Vector{Float64}, SlidingWindowConfig{Tuple{typeof(mean), typeof(var), var"#sqsum#sqsum##0"}, Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}, typeof(last)}}, signif::SurrogatesSignificance{RandomFourier, Vector{Symbol}, TaskLocalRNG}) @ TransitionsInTimeseries ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:85 [4] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:11 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [6] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:45 [inlined] [7] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [8] IncludeInto @ ./Base.jl:305 [inlined] [9] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [11] testfile(file::String, testname::String) @ Main ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [12] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:7 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [14] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:11 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:489 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [19] _start() @ Base ./client.jl:560 segmented ridge regression: Error During Test at /home/pkgeval/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:73 Got exception outside of a @test TaskFailedException nested task error: BoundsError: attempt to access 1-element Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}} at index [2] Stacktrace: [1] throw_boundserror(A::Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, I::Tuple{Int64}) @ Base ./essentials.jl:15 [2] getindex @ ./essentials.jl:917 [inlined] [3] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:149 [inlined] [4] (::TransitionsInTimeseries.var"#significant_transitions##16#significant_transitions##17"{TransitionsInTimeseries.var"#significant_transitions##18#significant_transitions##19"{Vector{Vector{Float64}}, Vector{Int64}, Vector{Float64}, Matrix{Float64}, Matrix{Float64}, Vector{Symbol}, Int64, Int64, Tuple{typeof(mean), typeof(var)}, Vector{Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}}, Matrix{Float64}, Int64, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, UnitRange{Int64}}})(tid::Int64; onethread::Bool) @ TransitionsInTimeseries ./threadingconstructs.jl:276 [5] #significant_transitions##16 @ ./threadingconstructs.jl:243 [inlined] [6] (::Base.Threads.var"#threading_run##0#threading_run##1"{TransitionsInTimeseries.var"#significant_transitions##16#significant_transitions##17"{TransitionsInTimeseries.var"#significant_transitions##18#significant_transitions##19"{Vector{Vector{Float64}}, Vector{Int64}, Vector{Float64}, Matrix{Float64}, Matrix{Float64}, Vector{Symbol}, Int64, Int64, Tuple{typeof(mean), typeof(var)}, Vector{Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}}, Matrix{Float64}, Int64, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, UnitRange{Int64}}}, Int64})() @ Base.Threads ./threadingconstructs.jl:177 Stacktrace: [1] threading_run(fun::TransitionsInTimeseries.var"#significant_transitions##16#significant_transitions##17"{TransitionsInTimeseries.var"#significant_transitions##18#significant_transitions##19"{Vector{Vector{Float64}}, Vector{Int64}, Vector{Float64}, Matrix{Float64}, Matrix{Float64}, Vector{Symbol}, Int64, Int64, Tuple{typeof(mean), typeof(var)}, Vector{Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}}, Matrix{Float64}, Int64, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomFourier, Vector{Float64}, Vector{Float64}, @NamedTuple{inverse::AbstractFFTs.ScaledPlan{ComplexF64, FFTW.rFFTWPlan{ComplexF64, 1, false, 1, UnitRange{Int64}}, Float64}, m::Float64, coeffs::Vector{Float64}, n::Int64, r::Vector{Float64}, ϕ::Vector{Float64}, shuffled𝓕::Vector{ComplexF64}}, Xoshiro}}, UnitRange{Int64}}}, static::Bool) @ Base.Threads ./threadingconstructs.jl:196 [2] macro expansion @ ./threadingconstructs.jl:213 [inlined] [3] significant_transitions(res::SegmentedWindowResults{Vector{Float64}, Float64, Float64, Vector{Float64}, SegmentedWindowConfig{Tuple{typeof(mean), typeof(var)}, Tuple{RidgeRegressionSlope, RidgeRegressionSlope}, typeof(last)}, Vector{Tuple{PrecomputedRidgeRegressionSlope{Float64}, PrecomputedRidgeRegressionSlope{Float64}}}}, signif::SurrogatesSignificance{RandomFourier, Vector{Symbol}, TaskLocalRNG}) @ TransitionsInTimeseries ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:147 [4] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:74 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [6] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:103 [inlined] [7] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [8] IncludeInto @ ./Base.jl:305 [inlined] [9] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [11] testfile(file::String, testname::String) @ Main ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [12] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:7 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [14] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:11 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:489 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [19] _start() @ Base ./client.jl:560 nothing indicator: Error During Test at /home/pkgeval/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:110 Got exception outside of a @test TaskFailedException nested task error: BoundsError: attempt to access 1-element Vector{TimeseriesSurrogates.SurrogateGenerator{RandomShuffle, Vector{Float64}, Vector{Float64}, @NamedTuple{permutation::Vector{Int64}, idxs::Vector{Int64}}, Xoshiro}} at index [2] Stacktrace: [1] throw_boundserror(A::Vector{TimeseriesSurrogates.SurrogateGenerator{RandomShuffle, Vector{Float64}, Vector{Float64}, @NamedTuple{permutation::Vector{Int64}, idxs::Vector{Int64}}, Xoshiro}}, I::Tuple{Int64}) @ Base ./essentials.jl:15 [2] getindex @ ./essentials.jl:917 [inlined] [3] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:87 [inlined] [4] (::TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomShuffle, Vector{Float64}, Vector{Float64}, @NamedTuple{permutation::Vector{Int64}, idxs::Vector{Int64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{typeof(difference_of_means), typeof(difference_of_maxes)}, Nothing, Matrix{Float64}, UnitRange{Int64}}})(tid::Int64; onethread::Bool) @ TransitionsInTimeseries ./threadingconstructs.jl:276 [5] #significant_transitions##8 @ ./threadingconstructs.jl:243 [inlined] [6] (::Base.Threads.var"#threading_run##0#threading_run##1"{TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomShuffle, Vector{Float64}, Vector{Float64}, @NamedTuple{permutation::Vector{Int64}, idxs::Vector{Int64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{typeof(difference_of_means), typeof(difference_of_maxes)}, Nothing, Matrix{Float64}, UnitRange{Int64}}}, Int64})() @ Base.Threads ./threadingconstructs.jl:177 Stacktrace: [1] threading_run(fun::TransitionsInTimeseries.var"#significant_transitions##8#significant_transitions##9"{TransitionsInTimeseries.var"#significant_transitions##10#significant_transitions##11"{Vector{Vector{Float64}}, Vector{TimeseriesSurrogates.SurrogateGenerator{RandomShuffle, Vector{Float64}, Vector{Float64}, @NamedTuple{permutation::Vector{Int64}, idxs::Vector{Int64}}, Xoshiro}}, Matrix{Float64}, Matrix{Float64}, Int64, Vector{Symbol}, Int64, Int64, Int64, Int64, Tuple{typeof(difference_of_means), typeof(difference_of_maxes)}, Nothing, Matrix{Float64}, UnitRange{Int64}}}, static::Bool) @ Base.Threads ./threadingconstructs.jl:196 [2] macro expansion @ ./threadingconstructs.jl:213 [inlined] [3] significant_transitions(res::SlidingWindowResults{Base.OneTo{Int64}, Int64, Float64, Vector{Float64}, Base.OneTo{Int64}, SlidingWindowConfig{Nothing, Tuple{typeof(difference_of_means), typeof(difference_of_maxes)}, typeof(midpoint)}}, signif::SurrogatesSignificance{RandomShuffle, Vector{Symbol}, TaskLocalRNG}) @ TransitionsInTimeseries ~/.julia/packages/TransitionsInTimeseries/0uomy/src/significance/surrogates_significance.jl:85 [4] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:111 [5] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [6] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/full_analysis.jl:130 [inlined] [7] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [8] IncludeInto @ ./Base.jl:305 [inlined] [9] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [inlined] [10] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [11] testfile(file::String, testname::String) @ Main ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:4 [12] top-level scope @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:7 [13] macro expansion @ /opt/julia/share/julia/stdlib/v1.12/Test/src/Test.jl:1771 [inlined] [14] macro expansion @ ~/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:11 [inlined] [15] include(mapexpr::Function, mod::Module, _path::String) @ Base ./Base.jl:304 [16] top-level scope @ none:6 [17] eval(m::Module, e::Any) @ Core ./boot.jl:489 [18] exec_options(opts::Base.JLOptions) @ Base ./client.jl:294 [19] _start() @ Base ./client.jl:560 Test Summary: | Pass Error Total Time TranstionIndicators.jl | 46 3 49 1m33.4s Timeseries | 4 4 17.5s Windowing | 2 2 1.2s Indicators | 12 12 5.0s Change metrics | 8 8 16.2s Full analysis | 12 3 15 32.7s missmatch in length | 2 2 1.0s sliding ridge regression | 4 1 5 18.8s segmented ridge regression | 4 1 5 6.9s nothing indicator | 2 1 3 6.0s Slope change | 8 8 20.1s RNG of the outermost testset: Xoshiro(0xdfbdcb6db973c771, 0x4b4098c298c7463a, 0xb86d7ed9f8a0f6ed, 0x831507ed9baf65b1, 0xf1364776a0ba3497) ERROR: LoadError: Some tests did not pass: 46 passed, 0 failed, 3 errored, 0 broken. in expression starting at /home/pkgeval/.julia/packages/TransitionsInTimeseries/0uomy/test/runtests.jl:6 Testing failed after 106.1s ERROR: LoadError: Package TransitionsInTimeseries errored during testing Stacktrace: [1] pkgerror(msg::String) @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68 [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool) @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365 [3] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined] [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486 [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164 [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd}) @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [7] test @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined] [8] #test#81 @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined] [9] top-level scope @ /PkgEval.jl/scripts/evaluate.jl:219 [10] include(mod::Module, _path::String) @ Base ./Base.jl:303 [11] exec_options(opts::Base.JLOptions) @ Base ./client.jl:328 [12] _start() @ Base ./client.jl:560 in expression starting at /PkgEval.jl/scripts/evaluate.jl:210 PkgEval failed after 641.95s: package tests unexpectedly errored