Package evaluation of SparseKmeansFeatureRanking on Julia 1.12.0-DEV.2153 (83dcbd426d*) started at 2025-03-31T11:59:19.061


################################################################################
# Set-up
#

Installing PkgEval dependencies (TestEnv)...

Set-up completed after 9.23s


################################################################################
# Installation
#

Installing SparseKmeansFeatureRanking...
   Resolving package versions...
   Installed SIMDTypes ──────────────────────── v0.1.0
   Installed IrrationalConstants ────────────── v0.2.4
   Installed Crayons ────────────────────────── v4.1.1
   Installed BioGenerics ────────────────────── v0.1.5
   Installed BitTwiddlingConvenienceFunctions ─ v0.1.6
   Installed DiffRules ──────────────────────── v1.15.1
   Installed CodecXz ────────────────────────── v0.7.4
   Installed CpuId ──────────────────────────── v0.3.1
   Installed Adapt ──────────────────────────── v4.3.0
   Installed LayoutPointers ─────────────────── v0.1.17
   Installed OffsetArrays ───────────────────── v1.16.0
   Installed Preferences ────────────────────── v1.4.3
   Installed Zstd_jll ───────────────────────── v1.5.7+1
   Installed PtrArrays ──────────────────────── v1.3.0
   Installed TableTraits ────────────────────── v1.0.1
   Installed VectorizationBase ──────────────── v0.21.71
   Installed Bzip2_jll ──────────────────────── v1.0.9+0
   Installed Parsers ────────────────────────── v2.8.1
   Installed Tullio ─────────────────────────── v0.3.8
   Installed SentinelArrays ─────────────────── v1.4.8
   Installed CodecBzip2 ─────────────────────── v0.8.5
   Installed PrettyTables ───────────────────── v2.4.0
   Installed SpecialFunctions ───────────────── v2.5.0
   Installed CPUSummary ─────────────────────── v0.2.6
   Installed XZ_jll ─────────────────────────── v5.6.4+1
   Installed DataAPI ────────────────────────── v1.16.0
   Installed Tables ─────────────────────────── v1.12.0
   Installed IfElse ─────────────────────────── v0.1.1
   Installed PooledArrays ───────────────────── v1.4.3
   Installed InlineStrings ──────────────────── v1.4.3
   Installed JLLWrappers ────────────────────── v1.7.0
   Installed IteratorInterfaceExtensions ────── v1.0.0
   Installed NaNMath ────────────────────────── v1.1.2
   Installed LoopVectorization ──────────────── v0.12.172
   Installed BGZFStreams ────────────────────── v0.3.2
   Installed SparseKmeansFeatureRanking ─────── v0.1.2
   Installed PrecompileTools ────────────────── v1.3.0
   Installed DataValueInterfaces ────────────── v1.0.0
   Installed ThreadingUtilities ─────────────── v0.5.2
   Installed HostCPUFeatures ────────────────── v0.1.17
   Installed OrderedCollections ─────────────── v1.8.0
   Installed WorkerUtilities ────────────────── v1.6.1
   Installed LaTeXStrings ───────────────────── v1.4.0
   Installed ManualMemory ───────────────────── v0.1.8
   Installed InvertedIndices ────────────────── v1.3.1
   Installed PolyesterWeave ─────────────────── v0.2.2
   Installed DelimitedFiles ─────────────────── v1.9.1
   Installed TranscodingStreams ─────────────── v0.9.13
   Installed CSV ────────────────────────────── v0.10.15
   Installed FilePathsBase ──────────────────── v0.9.24
   Installed ArrayInterface ─────────────────── v7.18.0
   Installed Reexport ───────────────────────── v1.2.2
   Installed Statistics ─────────────────────── v1.11.1
   Installed VariantCallFormat ──────────────── v0.5.6
   Installed WeakRefStrings ─────────────────── v1.4.2
   Installed DataFrames ─────────────────────── v1.7.0
   Installed CodecZstd ──────────────────────── v0.8.6
   Installed Requires ───────────────────────── v1.3.1
   Installed BufferedStreams ────────────────── v1.2.2
   Installed LogExpFunctions ────────────────── v0.3.29
   Installed DataStructures ─────────────────── v0.18.22
   Installed CloseOpenIntervals ─────────────── v0.1.13
   Installed AliasTables ────────────────────── v1.1.3
   Installed Static ─────────────────────────── v1.2.0
   Installed StatsAPI ───────────────────────── v1.7.0
   Installed Compat ─────────────────────────── v4.16.0
   Installed SLEEFPirates ───────────────────── v0.6.43
   Installed OpenSpecFun_jll ────────────────── v0.5.6+0
   Installed CommonWorldInvalidations ───────── v1.0.0
   Installed UnPack ─────────────────────────── v1.0.2
   Installed Glob ───────────────────────────── v1.3.1
   Installed Distances ──────────────────────── v0.10.12
   Installed CodecZlib ──────────────────────── v0.7.8
   Installed StaticArrayInterface ───────────── v1.8.0
   Installed Automa ─────────────────────────── v0.8.4
   Installed Missings ───────────────────────── v1.2.0
   Installed StringManipulation ─────────────── v0.4.1
   Installed SortingAlgorithms ──────────────── v1.2.1
   Installed DocStringExtensions ────────────── v0.9.4
   Installed StatsBase ──────────────────────── v0.34.4
   Installed SnpArrays ──────────────────────── v0.3.22
  Installing 4 artifacts
   Installed artifact OpenSpecFun 194.9 KiB
   Installed artifact Bzip2       503.5 KiB
   Installed artifact Zstd        646.0 KiB
   Installed artifact XZ          1.4 MiB
    Updating `~/.julia/environments/v1.12/Project.toml`
  [a6138be3] + SparseKmeansFeatureRanking v0.1.2
    Updating `~/.julia/environments/v1.12/Manifest.toml`
  [79e6a3ab] + Adapt v4.3.0
  [66dad0bd] + AliasTables v1.1.3
  [4fba245c] + ArrayInterface v7.18.0
⌅ [67c07d97] + Automa v0.8.4
  [28d598bf] + BGZFStreams v0.3.2
  [47718e42] + BioGenerics v0.1.5
  [62783981] + BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] + BufferedStreams v1.2.2
  [2a0fbf3d] + CPUSummary v0.2.6
  [336ed68f] + CSV v0.10.15
  [fb6a15b2] + CloseOpenIntervals v0.1.13
  [523fee87] + CodecBzip2 v0.8.5
  [ba30903b] + CodecXz v0.7.4
  [944b1d66] + CodecZlib v0.7.8
  [6b39b394] + CodecZstd v0.8.6
  [f70d9fcc] + CommonWorldInvalidations v1.0.0
  [34da2185] + Compat v4.16.0
  [adafc99b] + CpuId v0.3.1
  [a8cc5b0e] + Crayons v4.1.1
  [9a962f9c] + DataAPI v1.16.0
  [a93c6f00] + DataFrames v1.7.0
  [864edb3b] + DataStructures v0.18.22
  [e2d170a0] + DataValueInterfaces v1.0.0
  [8bb1440f] + DelimitedFiles v1.9.1
  [b552c78f] + DiffRules v1.15.1
  [b4f34e82] + Distances v0.10.12
  [ffbed154] + DocStringExtensions v0.9.4
  [48062228] + FilePathsBase v0.9.24
  [c27321d9] + Glob v1.3.1
  [3e5b6fbb] + HostCPUFeatures v0.1.17
  [615f187c] + IfElse v0.1.1
  [842dd82b] + InlineStrings v1.4.3
  [41ab1584] + InvertedIndices v1.3.1
  [92d709cd] + IrrationalConstants v0.2.4
  [82899510] + IteratorInterfaceExtensions v1.0.0
  [692b3bcd] + JLLWrappers v1.7.0
  [b964fa9f] + LaTeXStrings v1.4.0
  [10f19ff3] + LayoutPointers v0.1.17
  [2ab3a3ac] + LogExpFunctions v0.3.29
  [bdcacae8] + LoopVectorization v0.12.172
  [d125e4d3] + ManualMemory v0.1.8
  [e1d29d7a] + Missings v1.2.0
  [77ba4419] + NaNMath v1.1.2
  [6fe1bfb0] + OffsetArrays v1.16.0
  [bac558e1] + OrderedCollections v1.8.0
  [69de0a69] + Parsers v2.8.1
  [1d0040c9] + PolyesterWeave v0.2.2
  [2dfb63ee] + PooledArrays v1.4.3
  [aea7be01] + PrecompileTools v1.3.0
  [21216c6a] + Preferences v1.4.3
  [08abe8d2] + PrettyTables v2.4.0
  [43287f4e] + PtrArrays v1.3.0
  [189a3867] + Reexport v1.2.2
  [ae029012] + Requires v1.3.1
  [94e857df] + SIMDTypes v0.1.0
  [476501e8] + SLEEFPirates v0.6.43
  [91c51154] + SentinelArrays v1.4.8
  [4e780e97] + SnpArrays v0.3.22
  [a2af1166] + SortingAlgorithms v1.2.1
  [a6138be3] + SparseKmeansFeatureRanking v0.1.2
  [276daf66] + SpecialFunctions v2.5.0
  [aedffcd0] + Static v1.2.0
  [0d7ed370] + StaticArrayInterface v1.8.0
  [10745b16] + Statistics v1.11.1
  [82ae8749] + StatsAPI v1.7.0
  [2913bbd2] + StatsBase v0.34.4
  [892a3eda] + StringManipulation v0.4.1
  [3783bdb8] + TableTraits v1.0.1
  [bd369af6] + Tables v1.12.0
  [8290d209] + ThreadingUtilities v0.5.2
⌅ [3bb67fe8] + TranscodingStreams v0.9.13
  [bc48ee85] + Tullio v0.3.8
  [3a884ed6] + UnPack v1.0.2
  [28eba6e3] + VariantCallFormat v0.5.6
  [3d5dd08c] + VectorizationBase v0.21.71
  [ea10d353] + WeakRefStrings v1.4.2
  [76eceee3] + WorkerUtilities v1.6.1
  [6e34b625] + Bzip2_jll v1.0.9+0
  [efe28fd5] + OpenSpecFun_jll v0.5.6+0
  [ffd25f8a] + XZ_jll v5.6.4+1
  [3161d3a3] + Zstd_jll v1.5.7+1
  [56f22d72] + Artifacts v1.11.0
  [2a0f44e3] + Base64 v1.11.0
  [ade2ca70] + Dates v1.11.0
  [9fa8497b] + Future v1.11.0
  [b77e0a4c] + InteractiveUtils v1.11.0
  [ac6e5ff7] + JuliaSyntaxHighlighting v1.12.0
  [8f399da3] + Libdl v1.11.0
  [37e2e46d] + LinearAlgebra v1.12.0
  [56ddb016] + Logging v1.11.0
  [d6f4376e] + Markdown v1.11.0
  [a63ad114] + Mmap v1.11.0
  [de0858da] + Printf v1.11.0
  [9a3f8284] + Random v1.11.0
  [ea8e919c] + SHA v0.7.0
  [9e88b42a] + Serialization v1.11.0
  [2f01184e] + SparseArrays v1.12.0
  [f489334b] + StyledStrings v1.11.0
  [fa267f1f] + TOML v1.0.3
  [8dfed614] + Test v1.11.0
  [cf7118a7] + UUIDs v1.11.0
  [4ec0a83e] + Unicode v1.11.0
  [e66e0078] + CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] + OpenBLAS_jll v0.3.29+0
  [05823500] + OpenLibm_jll v0.8.5+0
  [bea87d4a] + SuiteSparse_jll v7.8.3+2
  [83775a58] + Zlib_jll v1.3.1+2
  [8e850b90] + libblastrampoline_jll v5.12.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading. To see why use `status --outdated -m`

Installation completed after 12.01s


################################################################################
# Precompilation
#

Precompiling PkgEval dependencies...
Precompiling packages...
   6768.0 ms  ✓ TestEnv
  1 dependency successfully precompiled in 9 seconds. 25 already precompiled.

Precompiling package dependencies...
ERROR: LoadError: The following 2 direct dependencies failed to precompile:

SparseKmeansFeatureRanking 

Failed to precompile SparseKmeansFeatureRanking [a6138be3-5d3e-4f3e-9009-7e37efc59f36] to "/home/pkgeval/.julia/compiled/v1.12/SparseKmeansFeatureRanking/jl_rL3GTh".
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:303
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:3015
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2861
 [7] include_string
   @ ./loading.jl:2871 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:326
 [9] _start()
   @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.12/SnpArrays/jl_0t9FWU".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3302
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2688
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#232
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3873
 [11] maybe_cachefile_lock
    @ ./loading.jl:3870 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2674
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2502
 [14] macro expansion
    @ ./loading.jl:2430 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2395
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2371
 [18] top-level scope
    @ ~/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:5
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3015
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2861
 [24] include_string
    @ ./loading.jl:2871 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [26] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:1
in expression starting at stdin:5
SnpArrays 

Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.12/SnpArrays/jl_ggQ0vV".
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:303
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:3015
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2861
 [7] include_string
   @ ./loading.jl:2871 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:326
 [9] _start()
   @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at stdin:5
in expression starting at /PkgEval.jl/scripts/precompile.jl:37

Precompilation failed after 583.37s



################################################################################
# Testing
#

     Testing SparseKmeansFeatureRanking
      Status `/tmp/jl_DB3uMR/Project.toml`
  [6e4b80f9] BenchmarkTools v1.6.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b4f34e82] Distances v0.10.12
  [e1d29d7a] Missings v1.2.0
  [4e780e97] SnpArrays v0.3.22
  [a6138be3] SparseKmeansFeatureRanking v0.1.2
  [10745b16] Statistics v1.11.1
  [2913bbd2] StatsBase v0.34.4
  [9a3f8284] Random v1.11.0
  [8dfed614] Test v1.11.0
      Status `/tmp/jl_DB3uMR/Manifest.toml`
  [79e6a3ab] Adapt v4.3.0
  [66dad0bd] AliasTables v1.1.3
  [4fba245c] ArrayInterface v7.18.0
⌅ [67c07d97] Automa v0.8.4
  [28d598bf] BGZFStreams v0.3.2
  [6e4b80f9] BenchmarkTools v1.6.0
  [47718e42] BioGenerics v0.1.5
  [62783981] BitTwiddlingConvenienceFunctions v0.1.6
  [e1450e63] BufferedStreams v1.2.2
  [2a0fbf3d] CPUSummary v0.2.6
  [336ed68f] CSV v0.10.15
  [fb6a15b2] CloseOpenIntervals v0.1.13
  [523fee87] CodecBzip2 v0.8.5
  [ba30903b] CodecXz v0.7.4
  [944b1d66] CodecZlib v0.7.8
  [6b39b394] CodecZstd v0.8.6
  [f70d9fcc] CommonWorldInvalidations v1.0.0
  [34da2185] Compat v4.16.0
  [adafc99b] CpuId v0.3.1
  [a8cc5b0e] Crayons v4.1.1
  [9a962f9c] DataAPI v1.16.0
  [a93c6f00] DataFrames v1.7.0
  [864edb3b] DataStructures v0.18.22
  [e2d170a0] DataValueInterfaces v1.0.0
  [8bb1440f] DelimitedFiles v1.9.1
  [b552c78f] DiffRules v1.15.1
  [b4f34e82] Distances v0.10.12
  [ffbed154] DocStringExtensions v0.9.4
  [48062228] FilePathsBase v0.9.24
  [c27321d9] Glob v1.3.1
  [3e5b6fbb] HostCPUFeatures v0.1.17
  [615f187c] IfElse v0.1.1
  [842dd82b] InlineStrings v1.4.3
  [41ab1584] InvertedIndices v1.3.1
  [92d709cd] IrrationalConstants v0.2.4
  [82899510] IteratorInterfaceExtensions v1.0.0
  [692b3bcd] JLLWrappers v1.7.0
  [682c06a0] JSON v0.21.4
  [b964fa9f] LaTeXStrings v1.4.0
  [10f19ff3] LayoutPointers v0.1.17
  [2ab3a3ac] LogExpFunctions v0.3.29
  [bdcacae8] LoopVectorization v0.12.172
  [d125e4d3] ManualMemory v0.1.8
  [e1d29d7a] Missings v1.2.0
  [77ba4419] NaNMath v1.1.2
  [6fe1bfb0] OffsetArrays v1.16.0
  [bac558e1] OrderedCollections v1.8.0
  [69de0a69] Parsers v2.8.1
  [1d0040c9] PolyesterWeave v0.2.2
  [2dfb63ee] PooledArrays v1.4.3
  [aea7be01] PrecompileTools v1.3.0
  [21216c6a] Preferences v1.4.3
  [08abe8d2] PrettyTables v2.4.0
  [43287f4e] PtrArrays v1.3.0
  [189a3867] Reexport v1.2.2
  [ae029012] Requires v1.3.1
  [94e857df] SIMDTypes v0.1.0
  [476501e8] SLEEFPirates v0.6.43
  [91c51154] SentinelArrays v1.4.8
  [4e780e97] SnpArrays v0.3.22
  [a2af1166] SortingAlgorithms v1.2.1
  [a6138be3] SparseKmeansFeatureRanking v0.1.2
  [276daf66] SpecialFunctions v2.5.0
  [aedffcd0] Static v1.2.0
  [0d7ed370] StaticArrayInterface v1.8.0
  [10745b16] Statistics v1.11.1
  [82ae8749] StatsAPI v1.7.0
  [2913bbd2] StatsBase v0.34.4
  [892a3eda] StringManipulation v0.4.1
  [3783bdb8] TableTraits v1.0.1
  [bd369af6] Tables v1.12.0
  [8290d209] ThreadingUtilities v0.5.2
⌅ [3bb67fe8] TranscodingStreams v0.9.13
  [bc48ee85] Tullio v0.3.8
  [3a884ed6] UnPack v1.0.2
  [28eba6e3] VariantCallFormat v0.5.6
  [3d5dd08c] VectorizationBase v0.21.71
  [ea10d353] WeakRefStrings v1.4.2
  [76eceee3] WorkerUtilities v1.6.1
  [6e34b625] Bzip2_jll v1.0.9+0
  [efe28fd5] OpenSpecFun_jll v0.5.6+0
  [ffd25f8a] XZ_jll v5.6.4+1
  [3161d3a3] Zstd_jll v1.5.7+1
  [56f22d72] Artifacts v1.11.0
  [2a0f44e3] Base64 v1.11.0
  [ade2ca70] Dates v1.11.0
  [9fa8497b] Future v1.11.0
  [b77e0a4c] InteractiveUtils v1.11.0
  [ac6e5ff7] JuliaSyntaxHighlighting v1.12.0
  [8f399da3] Libdl v1.11.0
  [37e2e46d] LinearAlgebra v1.12.0
  [56ddb016] Logging v1.11.0
  [d6f4376e] Markdown v1.11.0
  [a63ad114] Mmap v1.11.0
  [de0858da] Printf v1.11.0
  [9abbd945] Profile v1.11.0
  [9a3f8284] Random v1.11.0
  [ea8e919c] SHA v0.7.0
  [9e88b42a] Serialization v1.11.0
  [2f01184e] SparseArrays v1.12.0
  [f489334b] StyledStrings v1.11.0
  [fa267f1f] TOML v1.0.3
  [8dfed614] Test v1.11.0
  [cf7118a7] UUIDs v1.11.0
  [4ec0a83e] Unicode v1.11.0
  [e66e0078] CompilerSupportLibraries_jll v1.3.0+1
  [4536629a] OpenBLAS_jll v0.3.29+0
  [05823500] OpenLibm_jll v0.8.5+0
  [bea87d4a] SuiteSparse_jll v7.8.3+2
  [83775a58] Zlib_jll v1.3.1+2
  [8e850b90] libblastrampoline_jll v5.12.0+0
        Info Packages marked with ⌅ have new versions available but compatibility constraints restrict them from upgrading.
     Testing Running tests...
Precompiling packages...
           ✗ SnpArrays
Info Given SparseKmeansFeatureRanking was explicitly requested, output will be shown live 
WARNING: llvmcall with integer pointers is deprecated.
Use actual pointers instead, replacing i32 or i64 with i8* or ptr
in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:303
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:3015
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2861
 [7] include_string
   @ ./loading.jl:2871 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:326
 [9] _start()
   @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.12/SnpArrays/jl_FpPkbp".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3302
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2688
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#232
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3873
 [11] maybe_cachefile_lock
    @ ./loading.jl:3870 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2674
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2502
 [14] macro expansion
    @ ./loading.jl:2430 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2395
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2371
 [18] top-level scope
    @ ~/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:5
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3015
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2861
 [24] include_string
    @ ./loading.jl:2871 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [26] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:1
in expression starting at stdin:5
           ✗ SparseKmeansFeatureRanking
  0 dependencies successfully precompiled in 79 seconds. 110 already precompiled.

ERROR: LoadError: The following 2 direct dependencies failed to precompile:

SparseKmeansFeatureRanking 

Failed to precompile SparseKmeansFeatureRanking [a6138be3-5d3e-4f3e-9009-7e37efc59f36] to "/home/pkgeval/.julia/compiled/v1.12/SparseKmeansFeatureRanking/jl_dM1jJt".
WARNING: llvmcall with integer pointers is deprecated.
Use actual pointers instead, replacing i32 or i64 with i8* or ptr
in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:303
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::String)
   @ Base ./loading.jl:3015
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2861
 [7] include_string
   @ ./loading.jl:2871 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:326
 [9] _start()
   @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at stdin:5
ERROR: LoadError: Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.12/SnpArrays/jl_FpPkbp".
Stacktrace:
  [1] error(s::String)
    @ Base ./error.jl:44
  [2] compilecache(pkg::Base.PkgId, path::String, internal_stderr::IO, internal_stdout::IO, keep_loaded_modules::Bool; flags::Cmd, cacheflags::Base.CacheFlags, reasons::Dict{String, Int64}, loadable_exts::Nothing)
    @ Base ./loading.jl:3302
  [3] (::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId})()
    @ Base ./loading.jl:2688
  [4] mkpidlock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, at::String, pid::Int32; kwopts::@Kwargs{stale_age::Int64, wait::Bool})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:93
  [5] #mkpidlock#7
    @ /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:88 [inlined]
  [6] trymkpidlock(::Function, ::Vararg{Any}; kwargs::@Kwargs{stale_age::Int64})
    @ FileWatching.Pidfile /opt/julia/share/julia/stdlib/v1.12/FileWatching/src/pidfile.jl:114
  [7] apply_gr_kw(::NamedTuple, ::GlobalRef, ::Any, ::Vararg{Any})
    @ Base ./reflection.jl:1279
  [8] #invokelatest_gr#232
    @ ./reflection.jl:1287 [inlined]
  [9] invokelatest_gr
    @ ./reflection.jl:1281 [inlined]
 [10] maybe_cachefile_lock(f::Base.var"#__require_prelocked##0#__require_prelocked##1"{Base.PkgId}, pkg::Base.PkgId, srcpath::String; stale_age::Int64)
    @ Base ./loading.jl:3873
 [11] maybe_cachefile_lock
    @ ./loading.jl:3870 [inlined]
 [12] __require_prelocked(pkg::Base.PkgId, env::String)
    @ Base ./loading.jl:2674
 [13] _require_prelocked(uuidkey::Base.PkgId, env::String)
    @ Base ./loading.jl:2502
 [14] macro expansion
    @ ./loading.jl:2430 [inlined]
 [15] macro expansion
    @ ./lock.jl:376 [inlined]
 [16] __require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2395
 [17] require(into::Module, mod::Symbol)
    @ Base ./loading.jl:2371
 [18] top-level scope
    @ ~/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:5
 [19] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [20] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
    @ Base ./loading.jl:3015
 [21] top-level scope
    @ stdin:5
 [22] eval(m::Module, e::Any)
    @ Core ./boot.jl:489
 [23] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
    @ Base ./loading.jl:2861
 [24] include_string
    @ ./loading.jl:2871 [inlined]
 [25] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:326
 [26] _start()
    @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SparseKmeansFeatureRanking/xOMjS/src/SparseKmeansFeatureRanking.jl:1
in expression starting at stdin:5
SnpArrays 

Failed to precompile SnpArrays [4e780e97-f5bf-4111-9dc4-b70aaf691b06] to "/home/pkgeval/.julia/compiled/v1.12/SnpArrays/jl_XMIZP8".
WARNING: llvmcall with integer pointers is deprecated.
Use actual pointers instead, replacing i32 or i64 with i8* or ptr
in initialize_task(Any) at /home/pkgeval/.julia/packages/ThreadingUtilities/3z3g0/src/ThreadingUtilities.jl
ERROR: LoadError: invalid assignment to constant SnpArrays.AbstractSnpArray. This redefinition may be permitted using the `const` keyword.
Stacktrace:
 [1] top-level scope
   @ ~/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:48
 [2] include(mod::Module, _path::String)
   @ Base ./Base.jl:303
 [3] include_package_for_output(pkg::Base.PkgId, input::String, depot_path::Vector{String}, dl_load_path::Vector{String}, load_path::Vector{String}, concrete_deps::Vector{Pair{Base.PkgId, UInt128}}, source::Nothing)
   @ Base ./loading.jl:3015
 [4] top-level scope
   @ stdin:5
 [5] eval(m::Module, e::Any)
   @ Core ./boot.jl:489
 [6] include_string(mapexpr::typeof(identity), mod::Module, code::String, filename::String)
   @ Base ./loading.jl:2861
 [7] include_string
   @ ./loading.jl:2871 [inlined]
 [8] exec_options(opts::Base.JLOptions)
   @ Base ./client.jl:326
 [9] _start()
   @ Base ./client.jl:560
in expression starting at /home/pkgeval/.julia/packages/SnpArrays/CSYLc/src/SnpArrays.jl:3
in expression starting at stdin:5
in expression starting at /home/pkgeval/.julia/packages/SparseKmeansFeatureRanking/xOMjS/test/runtests.jl:1

Testing failed after 86.18s

ERROR: LoadError: Package SparseKmeansFeatureRanking errored during testing
Stacktrace:
  [1] pkgerror(msg::String)
    @ Pkg.Types /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Types.jl:68
  [2] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool)
    @ Pkg.Operations /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2365
  [3] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/Operations.jl:2220 [inlined]
  [4] test(ctx::Pkg.Types.Context, pkgs::Vector{PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, force_latest_compatible_version::Bool, allow_earlier_backwards_compatible_versions::Bool, allow_reresolve::Bool, kwargs::@Kwargs{io::IOContext{IO}})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:486
  [5] test(pkgs::Vector{PackageSpec}; io::IOContext{IO}, kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:164
  [6] test(pkgs::Vector{String}; kwargs::@Kwargs{julia_args::Cmd})
    @ Pkg.API /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152
  [7] test
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:152 [inlined]
  [8] #test#81
    @ /opt/julia/share/julia/stdlib/v1.12/Pkg/src/API.jl:151 [inlined]
  [9] top-level scope
    @ /PkgEval.jl/scripts/evaluate.jl:219
 [10] include(mod::Module, _path::String)
    @ Base ./Base.jl:303
 [11] exec_options(opts::Base.JLOptions)
    @ Base ./client.jl:328
 [12] _start()
    @ Base ./client.jl:560
in expression starting at /PkgEval.jl/scripts/evaluate.jl:210

PkgEval failed after 782.4s: package fails to precompile